EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000004852 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: uncharacterized LOC111649913
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 7784 bases
Position: chrPEQF01096565.1:10508-18291
Accession: 111649913
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000006057	Ribonuc_2-5A	PF06479.12	2.8e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000006265	-	4592	XM_023399615	ENSSLDP00000006057	922 (aa)	XP_023255383	UPI000C6F815B

Gene Model

Click here to download ENSSLDG00000004852's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000004852's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000004852	-	100	94.685	ENSSLDG00000006883	-	100	94.685

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000004852	-	97	65.174	ENSAPOG00000018674	-	98	65.062	Acanthochromis_polyacanthus
ENSSLDG00000004852	-	99	68.764	ENSAOCG00000006611	-	99	68.764	Amphiprion_ocellaris
ENSSLDG00000004852	-	99	63.557	ENSAOCG00000006622	-	99	63.449	Amphiprion_ocellaris
ENSSLDG00000004852	-	99	63.232	ENSAPEG00000022456	-	99	63.124	Amphiprion_percula
ENSSLDG00000004852	-	96	68.652	ENSATEG00000016497	-	100	68.652	Anabas_testudineus
ENSSLDG00000004852	-	98	64.442	ENSACLG00000000717	-	99	64.100	Astatotilapia_calliptera
ENSSLDG00000004852	-	95	48.136	ENSAMXG00000029533	-	99	48.352	Astyanax_mexicanus
ENSSLDG00000004852	-	98	54.565	ENSCVAG00000016590	-	98	54.457	Cyprinodon_variegatus
ENSSLDG00000004852	-	95	47.735	ENSELUG00000021509	-	98	47.792	Esox_lucius
ENSSLDG00000004852	-	99	65.480	ENSMAMG00000005604	-	99	65.696	Mastacembelus_armatus
ENSSLDG00000004852	-	99	63.714	ENSMZEG00005001859	-	99	63.287	Maylandia_zebra
ENSSLDG00000004852	-	99	57.589	ENSORLG00000025218	-	99	57.266	Oryzias_latipes
ENSSLDG00000004852	-	99	57.589	ENSORLG00020014495	-	99	57.266	Oryzias_latipes_hni
ENSSLDG00000004852	-	99	57.917	ENSOMEG00000006152	-	99	57.917	Oryzias_melastigma
ENSSLDG00000004852	-	57	62.998	ENSPFOG00000000794	-	99	62.998	Poecilia_formosa
ENSSLDG00000004852	-	99	56.886	ENSPMEG00000016617	-	99	56.886	Poecilia_mexicana
ENSSLDG00000004852	-	95	47.577	ENSPNAG00000004804	-	98	46.637	Pygocentrus_nattereri
ENSSLDG00000004852	-	96	46.254	ENSSFOG00015018634	-	98	45.928	Scleropages_formosus
ENSSLDG00000004852	-	99	61.998	ENSSMAG00000011502	-	98	62.541	Scophthalmus_maximus
ENSSLDG00000004852	-	99	62.121	ENSSMAG00000011493	-	98	61.472	Scophthalmus_maximus
ENSSLDG00000004852	-	99	83.952	ENSSDUG00000007315	-	99	84.061	Seriola_dumerili