EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000004886 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: probable ribonuclease ZC3H12C
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 9380 bases
Position: chrPEQF01096938.1:75489-84868
Accession: 111650534
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000006119	RNase_Zc3h12a	PF11977.8	5.7e-65	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000006330	-	7430	XM_023400424	ENSSLDP00000006119	930 (aa)	XP_023256192	UPI000C6FC1BE

Gene Model

Click here to download ENSSLDG00000004886's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000004886's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000004886	-	99	46.146	ENSSLDG00000012268	-	85	48.856

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000004886	-	80	50.000	ENSAPOG00000015355	-	82	49.808	Acanthochromis_polyacanthus
ENSSLDG00000004886	-	92	76.720	ENSAPOG00000001632	-	99	78.841	Acanthochromis_polyacanthus
ENSSLDG00000004886	-	95	52.632	ENSACIG00000001362	-	83	59.677	Amphilophus_citrinellus
ENSSLDG00000004886	-	99	47.012	ENSAOCG00000003866	-	93	74.104	Amphiprion_ocellaris
ENSSLDG00000004886	-	99	46.782	ENSAPEG00000005727	-	94	63.871	Amphiprion_percula
ENSSLDG00000004886	-	72	50.000	ENSAPEG00000018582	-	99	49.710	Amphiprion_percula
ENSSLDG00000004886	-	99	46.516	ENSATEG00000004134	-	85	49.472	Anabas_testudineus
ENSSLDG00000004886	-	100	75.536	ENSATEG00000002260	-	93	87.739	Anabas_testudineus
ENSSLDG00000004886	-	99	46.509	ENSACLG00000027924	-	83	51.555	Astatotilapia_calliptera
ENSSLDG00000004886	-	100	71.337	ENSACLG00000018493	-	100	70.488	Astatotilapia_calliptera
ENSSLDG00000004886	-	85	45.927	ENSCSEG00000010073	-	80	77.021	Cynoglossus_semilaevis
ENSSLDG00000004886	-	99	67.910	ENSCSEG00000008542	-	99	67.129	Cynoglossus_semilaevis
ENSSLDG00000004886	-	99	57.531	ENSELUG00000005470	-	99	58.161	Esox_lucius
ENSSLDG00000004886	-	85	49.697	ENSELUG00000009319	-	59	60.549	Esox_lucius
ENSSLDG00000004886	-	99	44.849	ENSFHEG00000021225	-	85	64.151	Fundulus_heteroclitus
ENSSLDG00000004886	-	72	56.231	ENSGMOG00000017975	-	99	55.804	Gadus_morhua
ENSSLDG00000004886	-	99	44.303	ENSGAFG00000005290	-	99	46.418	Gambusia_affinis
ENSSLDG00000004886	-	72	67.665	ENSGACG00000001339	-	100	66.916	Gasterosteus_aculeatus
ENSSLDG00000004886	-	72	48.480	ENSGACG00000014201	-	99	47.500	Gasterosteus_aculeatus
ENSSLDG00000004886	-	99	46.411	ENSHBUG00000006831	-	83	51.435	Haplochromis_burtoni
ENSSLDG00000004886	-	71	65.909	ENSHCOG00000008878	-	64	61.359	Hippocampus_comes
ENSSLDG00000004886	-	99	47.518	ENSKMAG00000011694	-	99	47.315	Kryptolebias_marmoratus
ENSSLDG00000004886	-	83	50.363	ENSLBEG00000003547	-	84	49.231	Labrus_bergylta
ENSSLDG00000004886	-	100	76.898	ENSLBEG00000012710	-	100	76.791	Labrus_bergylta
ENSSLDG00000004886	-	83	50.242	ENSLBEG00000012554	-	84	66.447	Labrus_bergylta
ENSSLDG00000004886	-	100	77.599	ENSMAMG00000020372	-	100	78.135	Mastacembelus_armatus
ENSSLDG00000004886	-	99	47.624	ENSMAMG00000021794	-	84	77.872	Mastacembelus_armatus
ENSSLDG00000004886	-	100	71.230	ENSMZEG00005019137	-	99	73.018	Maylandia_zebra
ENSSLDG00000004886	-	99	46.608	ENSMZEG00005007718	-	83	51.313	Maylandia_zebra
ENSSLDG00000004886	-	100	71.016	ENSMMOG00000019526	-	94	69.733	Mola_mola
ENSSLDG00000004886	-	87	48.878	ENSMMOG00000005728	-	86	68.000	Mola_mola
ENSSLDG00000004886	-	66	54.644	ENSMALG00000010501	-	84	48.521	Monopterus_albus
ENSSLDG00000004886	-	100	70.664	ENSNBRG00000012175	-	100	69.713	Neolamprologus_brichardi
ENSSLDG00000004886	-	99	46.050	ENSNBRG00000006978	-	83	51.914	Neolamprologus_brichardi
ENSSLDG00000004886	-	99	47.209	ENSONIG00000012268	-	99	51.235	Oreochromis_niloticus
ENSSLDG00000004886	-	87	61.111	ENSORLG00000029243	-	91	61.111	Oryzias_latipes
ENSSLDG00000004886	-	83	50.792	ENSORLG00020017005	-	85	49.696	Oryzias_latipes_hni
ENSSLDG00000004886	-	85	49.464	ENSORLG00015015211	-	86	48.276	Oryzias_latipes_hsok
ENSSLDG00000004886	-	85	50.538	ENSOMEG00000006666	-	85	50.000	Oryzias_melastigma
ENSSLDG00000004886	-	78	64.773	ENSPMGG00000020126	-	79	64.583	Periophthalmus_magnuspinnatus
ENSSLDG00000004886	-	99	44.838	ENSPLAG00000009867	-	99	44.980	Poecilia_latipinna
ENSSLDG00000004886	-	99	44.990	ENSPMEG00000006624	-	99	45.428	Poecilia_mexicana
ENSSLDG00000004886	-	100	63.627	ENSPMEG00000011676	-	100	63.412	Poecilia_mexicana
ENSSLDG00000004886	-	99	44.892	ENSPREG00000010838	-	99	44.956	Poecilia_reticulata
ENSSLDG00000004886	-	98	63.468	ENSPREG00000001607	-	99	63.250	Poecilia_reticulata
ENSSLDG00000004886	-	99	45.895	ENSSMAG00000007545	-	82	50.845	Scophthalmus_maximus
ENSSLDG00000004886	-	100	83.174	ENSSMAG00000007258	-	100	83.174	Scophthalmus_maximus
ENSSLDG00000004886	-	99	46.244	ENSSDUG00000021864	-	83	49.590	Seriola_dumerili
ENSSLDG00000004886	-	100	92.366	ENSSDUG00000013237	-	99	99.229	Seriola_dumerili
ENSSLDG00000004886	-	100	76.502	ENSSPAG00000001850	-	100	75.536	Stegastes_partitus
ENSSLDG00000004886	-	99	46.425	ENSSPAG00000009485	-	85	50.000	Stegastes_partitus
ENSSLDG00000004886	-	83	49.822	ENSTRUG00000022519	-	83	48.929	Takifugu_rubripes
ENSSLDG00000004886	-	73	50.867	ENSTNIG00000014519	-	92	74.286	Tetraodon_nigroviridis
ENSSLDG00000004886	-	99	62.258	ENSXMAG00000014715	-	97	84.592	Xiphophorus_maculatus
ENSSLDG00000004886	-	99	44.794	ENSXMAG00000027171	-	99	46.038	Xiphophorus_maculatus