EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000004899 (Gene tree)
Gene ID: -
Gene Symbol: hnrnpub
Alias: hnrnpu|hnrpu|wu:fa66f11|wu:fc18b08|wu:fi89c08|zgc:111835|zgc:136480
Full Name: heterogeneous nuclear ribonucleoprotein U
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 11044 bases
Position: chrPEQF01099379.1:5625260-5636303
Accession: 111672686
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000006169	SAP	PF02037.27	3e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000006383	-	5079	XM_023430198	ENSSLDP00000006169	819 (aa)	XP_023285966	UPI000C6F7737
ENSSLDT00000006403	-	1746	-	ENSSLDP00000006188	581 (aa)	-	-

Gene Model

Click here to download ENSSLDG00000004899's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000004899's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000004899	hnrnpub	85	62.857	ENSSLDG00000005140	HNRNPUL1	62	44.165

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000004899	hnrnpub	85	70.588	ENSG00000153187	HNRNPU	99	64.333	Homo_sapiens
ENSSLDG00000004899	hnrnpub	100	89.377	ENSAPOG00000017400	hnrnpub	100	88.156	Acanthochromis_polyacanthus
ENSSLDG00000004899	hnrnpub	85	70.588	ENSAMEG00000009145	HNRNPU	77	70.588	Ailuropoda_melanoleuca
ENSSLDG00000004899	hnrnpub	100	84.345	ENSACIG00000012138	hnrnpub	96	87.040	Amphilophus_citrinellus
ENSSLDG00000004899	hnrnpub	100	90.965	ENSAOCG00000015843	hnrnpub	100	89.133	Amphiprion_ocellaris
ENSSLDG00000004899	hnrnpub	100	90.965	ENSAPEG00000014679	hnrnpub	100	89.133	Amphiprion_percula
ENSSLDG00000004899	hnrnpub	98	92.910	ENSATEG00000016178	hnrnpub	97	92.537	Anabas_testudineus
ENSSLDG00000004899	hnrnpub	86	68.750	ENSACAG00000004511	HNRNPU	78	68.750	Anolis_carolinensis
ENSSLDG00000004899	hnrnpub	79	56.138	ENSANAG00000033895	-	76	60.993	Aotus_nancymaae
ENSSLDG00000004899	hnrnpub	100	86.569	ENSACLG00000008165	hnrnpub	100	86.691	Astatotilapia_calliptera
ENSSLDG00000004899	hnrnpub	85	70.588	ENSBTAG00000007606	HNRNPU	79	70.588	Bos_taurus
ENSSLDG00000004899	hnrnpub	85	70.588	ENSCJAG00000016914	HNRNPU	79	70.588	Callithrix_jacchus
ENSSLDG00000004899	hnrnpub	77	58.544	ENSCAFG00020000918	HNRNPU	75	55.102	Canis_lupus_dingo
ENSSLDG00000004899	hnrnpub	79	56.287	ENSCHIG00000004900	HNRNPU	75	54.956	Capra_hircus
ENSSLDG00000004899	hnrnpub	79	56.437	ENSCPOG00000011887	HNRNPU	73	55.007	Cavia_porcellus
ENSSLDG00000004899	hnrnpub	85	70.588	ENSCCAG00000037859	-	79	70.588	Cebus_capucinus
ENSSLDG00000004899	hnrnpub	88	56.138	ENSCATG00000035273	HNRNPU	79	70.588	Cercocebus_atys
ENSSLDG00000004899	hnrnpub	79	56.437	ENSCLAG00000007100	HNRNPU	80	72.549	Chinchilla_lanigera
ENSSLDG00000004899	hnrnpub	79	56.138	ENSCSAG00000009219	HNRNPU	75	54.971	Chlorocebus_sabaeus
ENSSLDG00000004899	hnrnpub	85	70.588	ENSCHOG00000001387	HNRNPU	77	70.588	Choloepus_hoffmanni
ENSSLDG00000004899	hnrnpub	67	62.413	ENSCPBG00000009415	HNRNPU	79	68.519	Chrysemys_picta_bellii
ENSSLDG00000004899	hnrnpub	88	56.138	ENSCANG00000022780	HNRNPU	78	70.588	Colobus_angolensis_palliatus
ENSSLDG00000004899	hnrnpub	81	55.362	ENSCGRG00001020525	Hnrnpu	76	54.876	Cricetulus_griseus_chok1gshd
ENSSLDG00000004899	hnrnpub	100	78.469	ENSCSEG00000010804	hnrnpub	100	82.837	Cynoglossus_semilaevis
ENSSLDG00000004899	hnrnpub	92	86.792	ENSCVAG00000004280	hnrnpub	100	73.920	Cyprinodon_variegatus
ENSSLDG00000004899	hnrnpub	100	61.847	ENSDARG00000015206	hnrnpua	85	63.397	Danio_rerio
ENSSLDG00000004899	hnrnpub	100	61.979	ENSDARG00000004735	hnrnpub	100	58.462	Danio_rerio
ENSSLDG00000004899	hnrnpub	99	50.654	ENSDNOG00000000215	HNRNPU	87	75.510	Dasypus_novemcinctus
ENSSLDG00000004899	hnrnpub	79	56.287	ENSDORG00000015491	Hnrnpu	74	55.789	Dipodomys_ordii
ENSSLDG00000004899	hnrnpub	85	70.588	ENSETEG00000014565	HNRNPU	99	49.887	Echinops_telfairi
ENSSLDG00000004899	hnrnpub	80	55.965	ENSEASG00005003017	HNRNPU	75	54.783	Equus_asinus_asinus
ENSSLDG00000004899	hnrnpub	80	55.817	ENSECAG00000007955	HNRNPU	75	54.638	Equus_caballus
ENSSLDG00000004899	hnrnpub	100	74.797	ENSELUG00000010733	hnrnpub	85	79.050	Esox_lucius
ENSSLDG00000004899	hnrnpub	77	58.360	ENSFCAG00000002156	HNRNPU	74	56.801	Felis_catus
ENSSLDG00000004899	hnrnpub	93	55.263	ENSFDAG00000006026	HNRNPU	99	72.549	Fukomys_damarensis
ENSSLDG00000004899	hnrnpub	100	81.198	ENSFHEG00000022639	hnrnpub	100	81.317	Fundulus_heteroclitus
ENSSLDG00000004899	hnrnpub	100	72.640	ENSGMOG00000001755	hnrnpub	99	73.086	Gadus_morhua
ENSSLDG00000004899	hnrnpub	70	81.395	ENSGALG00000010671	HNRNPU	77	78.261	Gallus_gallus
ENSSLDG00000004899	hnrnpub	100	80.641	ENSGAFG00000009369	hnrnpub	100	80.765	Gambusia_affinis
ENSSLDG00000004899	hnrnpub	100	77.126	ENSGACG00000004679	hnrnpub	99	75.654	Gasterosteus_aculeatus
ENSSLDG00000004899	hnrnpub	85	70.588	ENSGGOG00000004061	HNRNPU	79	70.588	Gorilla_gorilla
ENSSLDG00000004899	hnrnpub	100	86.935	ENSHBUG00000012290	hnrnpub	100	87.057	Haplochromis_burtoni
ENSSLDG00000004899	hnrnpub	79	56.437	ENSHGLG00000010594	-	77	74.510	Heterocephalus_glaber_female
ENSSLDG00000004899	hnrnpub	90	74.510	ENSHGLG00100015093	HNRNPU	99	74.510	Heterocephalus_glaber_male
ENSSLDG00000004899	hnrnpub	100	72.706	ENSHCOG00000020091	hnrnpub	83	79.651	Hippocampus_comes
ENSSLDG00000004899	hnrnpub	76	93.617	ENSIPUG00000007749	hnrnpu	96	74.627	Ictalurus_punctatus
ENSSLDG00000004899	hnrnpub	79	56.222	ENSJJAG00000011371	Hnrnpu	83	60.526	Jaculus_jaculus
ENSSLDG00000004899	hnrnpub	100	82.005	ENSKMAG00000004532	hnrnpub	84	87.572	Kryptolebias_marmoratus
ENSSLDG00000004899	hnrnpub	100	86.804	ENSLBEG00000022520	hnrnpub	100	89.277	Labrus_bergylta
ENSSLDG00000004899	hnrnpub	99	47.821	ENSLACG00000017463	HNRNPU	74	50.147	Latimeria_chalumnae
ENSSLDG00000004899	hnrnpub	86	93.617	ENSLOCG00000016652	hnrnpua	78	93.617	Lepisosteus_oculatus
ENSSLDG00000004899	hnrnpub	99	51.412	ENSLAFG00000021377	HNRNPU	79	70.588	Loxodonta_africana
ENSSLDG00000004899	hnrnpub	88	56.138	ENSMFAG00000037308	HNRNPU	79	70.588	Macaca_fascicularis
ENSSLDG00000004899	hnrnpub	79	56.138	ENSMMUG00000021098	HNRNPU	75	54.971	Macaca_mulatta
ENSSLDG00000004899	hnrnpub	88	56.138	ENSMNEG00000043645	HNRNPU	79	70.588	Macaca_nemestrina
ENSSLDG00000004899	hnrnpub	100	91.341	ENSMAMG00000007196	hnrnpub	100	91.585	Mastacembelus_armatus
ENSSLDG00000004899	hnrnpub	100	86.569	ENSMZEG00005003185	hnrnpub	100	86.691	Maylandia_zebra
ENSSLDG00000004899	hnrnpub	81	55.556	ENSMAUG00000008842	Hnrnpu	76	54.876	Mesocricetus_auratus
ENSSLDG00000004899	hnrnpub	98	50.173	ENSMICG00000004616	HNRNPU	79	70.588	Microcebus_murinus
ENSSLDG00000004899	hnrnpub	81	55.409	ENSMOCG00000015623	Hnrnpu	79	83.721	Microtus_ochrogaster
ENSSLDG00000004899	hnrnpub	85	75.510	ENSMODG00000006515	HNRNPU	78	75.510	Monodelphis_domestica
ENSSLDG00000004899	hnrnpub	96	90.216	ENSMALG00000018243	hnrnpub	96	89.356	Monopterus_albus
ENSSLDG00000004899	hnrnpub	79	56.222	MGP_CAROLIEiJ_G0014962	Hnrnpu	75	55.051	Mus_caroli
ENSSLDG00000004899	hnrnpub	79	56.222	ENSMUSG00000039630	Hnrnpu	70	61.062	Mus_musculus
ENSSLDG00000004899	hnrnpub	79	55.922	MGP_PahariEiJ_G0028193	Hnrnpu	75	54.758	Mus_pahari
ENSSLDG00000004899	hnrnpub	79	56.222	MGP_SPRETEiJ_G0015761	Hnrnpu	75	55.051	Mus_spretus
ENSSLDG00000004899	hnrnpub	85	68.627	ENSMLUG00000000475	HNRNPU	84	57.143	Myotis_lucifugus
ENSSLDG00000004899	hnrnpub	99	51.071	ENSNGAG00000019075	Hnrnpu	75	54.971	Nannospalax_galili
ENSSLDG00000004899	hnrnpub	100	86.569	ENSNBRG00000017855	hnrnpub	100	86.691	Neolamprologus_brichardi
ENSSLDG00000004899	hnrnpub	70	75.510	ENSMEUG00000000541	HNRNPU	73	75.510	Notamacropus_eugenii
ENSSLDG00000004899	hnrnpub	100	83.659	ENSONIG00000001260	hnrnpub	88	90.497	Oreochromis_niloticus
ENSSLDG00000004899	hnrnpub	83	70.588	ENSOCUG00000014469	HNRNPU	70	70.588	Oryctolagus_cuniculus
ENSSLDG00000004899	hnrnpub	100	85.714	ENSORLG00000016114	hnrnpub	100	84.982	Oryzias_latipes
ENSSLDG00000004899	hnrnpub	100	86.081	ENSORLG00020005363	hnrnpub	100	85.348	Oryzias_latipes_hni
ENSSLDG00000004899	hnrnpub	100	86.081	ENSORLG00015001190	hnrnpub	100	85.348	Oryzias_latipes_hsok
ENSSLDG00000004899	hnrnpub	100	81.585	ENSOMEG00000014951	hnrnpub	100	83.639	Oryzias_melastigma
ENSSLDG00000004899	hnrnpub	79	56.287	ENSOGAG00000014024	HNRNPU	75	55.117	Otolemur_garnettii
ENSSLDG00000004899	hnrnpub	85	70.588	ENSOARG00000004985	HNRNPU	86	70.588	Ovis_aries
ENSSLDG00000004899	hnrnpub	85	70.588	ENSPPAG00000038652	HNRNPU	79	70.588	Pan_paniscus
ENSSLDG00000004899	hnrnpub	85	70.588	ENSPPRG00000002662	HNRNPU	79	70.588	Panthera_pardus
ENSSLDG00000004899	hnrnpub	85	70.588	ENSPTRG00000002182	HNRNPU	79	70.588	Pan_troglodytes
ENSSLDG00000004899	hnrnpub	79	56.138	ENSPANG00000011643	HNRNPU	76	60.993	Papio_anubis
ENSSLDG00000004899	hnrnpub	100	68.198	ENSPKIG00000006885	hnrnpua	81	69.795	Paramormyrops_kingsleyae
ENSSLDG00000004899	hnrnpub	100	69.361	ENSPKIG00000022332	hnrnpub	100	67.189	Paramormyrops_kingsleyae
ENSSLDG00000004899	hnrnpub	85	75.510	ENSPCIG00000008657	HNRNPU	78	75.510	Phascolarctos_cinereus
ENSSLDG00000004899	hnrnpub	100	83.092	ENSPFOG00000002908	hnrnpub	100	81.884	Poecilia_formosa
ENSSLDG00000004899	hnrnpub	100	82.609	ENSPLAG00000004160	hnrnpub	100	80.993	Poecilia_latipinna
ENSSLDG00000004899	hnrnpub	88	56.287	ENSPCOG00000018655	-	79	70.588	Propithecus_coquereli
ENSSLDG00000004899	hnrnpub	77	56.398	ENSPCOG00000003883	-	77	53.723	Propithecus_coquereli
ENSSLDG00000004899	hnrnpub	79	56.437	ENSPVAG00000002581	HNRNPU	79	70.588	Pteropus_vampyrus
ENSSLDG00000004899	hnrnpub	100	86.935	ENSPNYG00000021642	hnrnpub	100	87.057	Pundamilia_nyererei
ENSSLDG00000004899	hnrnpub	100	66.351	ENSPNAG00000001055	hnrnpub	83	62.397	Pygocentrus_nattereri
ENSSLDG00000004899	hnrnpub	79	56.222	ENSRNOG00000033790	Hnrnpu	75	55.198	Rattus_norvegicus
ENSSLDG00000004899	hnrnpub	79	55.389	ENSRBIG00000031519	HNRNPU	76	60.106	Rhinopithecus_bieti
ENSSLDG00000004899	hnrnpub	81	55.217	ENSRROG00000041642	HNRNPU	76	60.670	Rhinopithecus_roxellana
ENSSLDG00000004899	hnrnpub	100	68.945	ENSSFOG00015001124	hnrnpub	82	72.303	Scleropages_formosus
ENSSLDG00000004899	hnrnpub	100	67.503	ENSSFOG00015019004	hnrnpu	80	71.429	Scleropages_formosus
ENSSLDG00000004899	hnrnpub	100	88.507	ENSSMAG00000003607	hnrnpub	100	86.611	Scophthalmus_maximus
ENSSLDG00000004899	hnrnpub	100	98.782	ENSSDUG00000005912	hnrnpub	100	98.782	Seriola_dumerili
ENSSLDG00000004899	hnrnpub	81	55.637	ENSSPUG00000011393	HNRNPU	74	57.973	Sphenodon_punctatus
ENSSLDG00000004899	hnrnpub	100	91.453	ENSSPAG00000011853	hnrnpub	100	89.621	Stegastes_partitus
ENSSLDG00000004899	hnrnpub	88	56.138	ENSSSCG00000010877	HNRNPU	79	70.588	Sus_scrofa
ENSSLDG00000004899	hnrnpub	100	81.752	ENSTRUG00000007759	hnrnpub	100	81.851	Takifugu_rubripes
ENSSLDG00000004899	hnrnpub	100	74.224	ENSTNIG00000009725	hnrnpub	99	82.026	Tetraodon_nigroviridis
ENSSLDG00000004899	hnrnpub	85	70.588	ENSUAMG00000021120	HNRNPU	79	70.588	Ursus_americanus
ENSSLDG00000004899	hnrnpub	81	70.213	ENSUMAG00000012322	HNRNPU	88	56.212	Ursus_maritimus
ENSSLDG00000004899	hnrnpub	79	70.588	ENSVPAG00000010520	HNRNPU	86	58.442	Vicugna_pacos
ENSSLDG00000004899	hnrnpub	77	58.544	ENSVVUG00000026524	HNRNPU	75	55.102	Vulpes_vulpes
ENSSLDG00000004899	hnrnpub	99	50.058	ENSXETG00000011386	hnrnpu	77	53.130	Xenopus_tropicalis
ENSSLDG00000004899	hnrnpub	100	83.213	ENSXMAG00000010356	hnrnpub	100	82.126	Xiphophorus_maculatus