EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000004927 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 174403 bases
Position: chrPEQF01099586.1:5151999-5326401
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000006180	RVT_1	PF00078.27	1.7e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000006395	-	678	-	ENSSLDP00000006180	225 (aa)	-	-

Gene Model

Click here to download ENSSLDG00000004927's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000004927's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000004927	-	68	31.737	ENSSLDG00000008400	-	72	31.737
ENSSLDG00000004927	-	88	52.675	ENSSLDG00000008649	-	80	52.675
ENSSLDG00000004927	-	81	36.245	ENSSLDG00000007938	-	61	36.245

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000004927	-	80	38.839	ENSAPOG00000002619	-	69	37.946	Acanthochromis_polyacanthus
ENSSLDG00000004927	-	67	37.288	ENSACIG00000019176	-	71	37.288	Amphilophus_citrinellus
ENSSLDG00000004927	-	71	31.183	ENSACAG00000003251	-	53	31.183	Anolis_carolinensis
ENSSLDG00000004927	-	87	32.780	ENSACAG00000001728	-	65	32.780	Anolis_carolinensis
ENSSLDG00000004927	-	79	30.942	ENSACAG00000007690	-	61	30.942	Anolis_carolinensis
ENSSLDG00000004927	-	79	30.493	ENSACAG00000008212	-	92	30.493	Anolis_carolinensis
ENSSLDG00000004927	-	65	32.759	ENSACAG00000015905	-	50	32.759	Anolis_carolinensis
ENSSLDG00000004927	-	81	32.018	ENSACAG00000015425	-	71	32.018	Anolis_carolinensis
ENSSLDG00000004927	-	65	31.928	ENSACAG00000013709	-	70	31.928	Anolis_carolinensis
ENSSLDG00000004927	-	71	33.333	ENSACAG00000010146	-	52	33.333	Anolis_carolinensis
ENSSLDG00000004927	-	65	33.735	ENSACAG00000023905	-	52	33.735	Anolis_carolinensis
ENSSLDG00000004927	-	79	32.895	ENSACAG00000027102	-	83	32.895	Anolis_carolinensis
ENSSLDG00000004927	-	68	35.912	ENSACAG00000009507	-	53	35.912	Anolis_carolinensis
ENSSLDG00000004927	-	54	30.556	ENSACAG00000021986	-	52	30.556	Anolis_carolinensis
ENSSLDG00000004927	-	79	31.839	ENSACAG00000009220	-	59	31.839	Anolis_carolinensis
ENSSLDG00000004927	-	71	33.514	ENSACAG00000014976	-	76	33.514	Anolis_carolinensis
ENSSLDG00000004927	-	79	30.734	ENSACAG00000001531	-	65	30.734	Anolis_carolinensis
ENSSLDG00000004927	-	79	30.493	ENSACAG00000008465	-	92	30.493	Anolis_carolinensis
ENSSLDG00000004927	-	68	38.372	ENSACAG00000000785	-	51	39.535	Anolis_carolinensis
ENSSLDG00000004927	-	65	35.000	ENSACAG00000023518	-	78	35.000	Anolis_carolinensis
ENSSLDG00000004927	-	65	38.182	ENSACAG00000003609	-	52	38.182	Anolis_carolinensis
ENSSLDG00000004927	-	79	31.111	ENSACAG00000017043	-	62	31.111	Anolis_carolinensis
ENSSLDG00000004927	-	79	30.698	ENSACAG00000009012	-	62	30.698	Anolis_carolinensis
ENSSLDG00000004927	-	79	31.364	ENSACAG00000007292	-	55	31.364	Anolis_carolinensis
ENSSLDG00000004927	-	71	32.796	ENSACAG00000026980	-	54	32.796	Anolis_carolinensis
ENSSLDG00000004927	-	79	32.735	ENSACAG00000004760	-	55	32.735	Anolis_carolinensis
ENSSLDG00000004927	-	71	32.796	ENSACAG00000006802	-	75	32.796	Anolis_carolinensis
ENSSLDG00000004927	-	79	34.081	ENSACAG00000011371	-	83	34.081	Anolis_carolinensis
ENSSLDG00000004927	-	82	34.483	ENSANAG00000019517	-	84	34.483	Aotus_nancymaae
ENSSLDG00000004927	-	83	34.361	ENSCANG00000042059	-	84	34.361	Colobus_angolensis_palliatus
ENSSLDG00000004927	-	84	31.100	ENSELUG00000018872	-	72	31.100	Esox_lucius
ENSSLDG00000004927	-	90	33.735	ENSGGOG00000037859	-	72	33.735	Gorilla_gorilla
ENSSLDG00000004927	-	83	35.622	ENSGGOG00000038151	-	92	35.622	Gorilla_gorilla
ENSSLDG00000004927	-	80	36.404	ENSGGOG00000037757	-	85	36.404	Gorilla_gorilla
ENSSLDG00000004927	-	68	35.393	ENSKMAG00000008860	-	54	35.393	Kryptolebias_marmoratus
ENSSLDG00000004927	-	79	40.196	ENSKMAG00000008433	-	79	40.196	Kryptolebias_marmoratus
ENSSLDG00000004927	-	90	47.082	ENSLBEG00000000717	-	66	47.082	Labrus_bergylta
ENSSLDG00000004927	-	83	33.333	ENSMFAG00000041122	-	73	33.333	Macaca_fascicularis
ENSSLDG00000004927	-	83	36.481	ENSMFAG00000042626	-	87	36.481	Macaca_fascicularis
ENSSLDG00000004927	-	83	36.564	ENSMFAG00000037388	-	86	36.564	Macaca_fascicularis
ENSSLDG00000004927	-	72	38.947	ENSMMUG00000046373	-	52	38.947	Macaca_mulatta
ENSSLDG00000004927	-	81	31.086	ENSMMUG00000039057	-	65	31.086	Macaca_mulatta
ENSSLDG00000004927	-	90	35.242	ENSMMUG00000044216	-	76	35.242	Macaca_mulatta
ENSSLDG00000004927	-	84	35.193	ENSMMUG00000030669	-	65	35.193	Macaca_mulatta
ENSSLDG00000004927	-	80	37.273	ENSMZEG00005021019	-	55	37.273	Maylandia_zebra
ENSSLDG00000004927	-	72	39.683	ENSMICG00000047477	-	71	39.683	Microcebus_murinus
ENSSLDG00000004927	-	77	36.946	ENSNLEG00000035938	-	77	36.946	Nomascus_leucogenys
ENSSLDG00000004927	-	82	36.207	ENSNLEG00000035025	-	90	36.207	Nomascus_leucogenys
ENSSLDG00000004927	-	83	36.910	ENSNLEG00000029249	-	70	36.910	Nomascus_leucogenys
ENSSLDG00000004927	-	84	40.870	ENSORLG00000028858	-	54	40.870	Oryzias_latipes
ENSSLDG00000004927	-	84	42.174	ENSORLG00020005034	-	59	42.174	Oryzias_latipes_hni
ENSSLDG00000004927	-	88	35.484	ENSPPAG00000036257	-	86	35.484	Pan_paniscus
ENSSLDG00000004927	-	83	35.622	ENSPPAG00000022035	-	84	35.622	Pan_paniscus
ENSSLDG00000004927	-	82	37.209	ENSPPAG00000024633	-	87	37.209	Pan_paniscus
ENSSLDG00000004927	-	83	35.622	ENSPPAG00000023532	-	84	35.622	Pan_paniscus
ENSSLDG00000004927	-	82	37.209	ENSPTRG00000049055	-	87	37.209	Pan_troglodytes
ENSSLDG00000004927	-	79	34.272	ENSPTRG00000047700	-	85	34.272	Pan_troglodytes
ENSSLDG00000004927	-	83	36.052	ENSPTRG00000044831	-	80	36.052	Pan_troglodytes
ENSSLDG00000004927	-	93	34.071	ENSPTRG00000045526	-	93	34.071	Pan_troglodytes
ENSSLDG00000004927	-	82	36.726	ENSPANG00000035643	-	86	36.726	Papio_anubis
ENSSLDG00000004927	-	81	34.783	ENSPANG00000034834	-	89	34.783	Papio_anubis
ENSSLDG00000004927	-	71	38.503	ENSPANG00000031481	-	80	38.503	Papio_anubis
ENSSLDG00000004927	-	70	38.608	ENSPREG00000012704	-	68	38.608	Poecilia_reticulata
ENSSLDG00000004927	-	82	34.259	ENSPNYG00000012978	-	70	34.259	Pundamilia_nyererei
ENSSLDG00000004927	-	87	34.855	ENSPNAG00000016568	-	63	34.855	Pygocentrus_nattereri
ENSSLDG00000004927	-	88	43.421	ENSPNAG00000011741	-	54	43.421	Pygocentrus_nattereri
ENSSLDG00000004927	-	88	34.694	ENSRROG00000042961	-	85	34.694	Rhinopithecus_roxellana
ENSSLDG00000004927	-	70	34.595	ENSRROG00000040216	-	64	34.595	Rhinopithecus_roxellana
ENSSLDG00000004927	-	71	39.362	ENSRROG00000035908	-	65	39.362	Rhinopithecus_roxellana
ENSSLDG00000004927	-	83	36.052	ENSRROG00000035563	-	83	36.052	Rhinopithecus_roxellana
ENSSLDG00000004927	-	81	52.863	ENSSDUG00000021106	-	86	52.863	Seriola_dumerili
ENSSLDG00000004927	-	71	36.364	ENSSPUG00000004892	-	54	36.364	Sphenodon_punctatus
ENSSLDG00000004927	-	52	31.250	ENSUAMG00000003133	-	99	31.250	Ursus_americanus