EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000004942 (Gene tree)
Gene ID: -
Gene Symbol: larp4aa
Alias: larp4a|si:ch211-156j22.2
Full Name: La ribonucleoprotein domain family member 4
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 13364 bases
Position: chrPEQF01099340.1:4767839-4781202
Accession: 111670681
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000006218	La	PF05383.17	2.8e-17	1	1
ENSSLDP00000006198	La	PF05383.17	2.8e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000006413	-	5860	XM_023427507	ENSSLDP00000006198	810 (aa)	XP_023283275	UPI000C6FC3E9
ENSSLDT00000006433	-	5818	XM_023427509	ENSSLDP00000006218	796 (aa)	XP_023283277	UPI000C6F6E8B

Gene Model

Click here to download ENSSLDG00000004942's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000004942's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000004942	larp4aa	95	51.403	ENSSLDG00000001791	larp4ab	100	51.145

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000004942	larp4aa	87	60.967	ENSG00000161813	LARP4	96	62.567	Homo_sapiens
ENSSLDG00000004942	larp4aa	95	51.396	ENSAPOG00000021331	larp4ab	53	64.304	Acanthochromis_polyacanthus
ENSSLDG00000004942	larp4aa	100	91.111	ENSAPOG00000007142	larp4aa	100	91.481	Acanthochromis_polyacanthus
ENSSLDG00000004942	larp4aa	100	85.445	ENSACIG00000001198	larp4aa	100	85.822	Amphilophus_citrinellus
ENSSLDG00000004942	larp4aa	100	92.346	ENSAOCG00000002408	larp4aa	100	92.346	Amphiprion_ocellaris
ENSSLDG00000004942	larp4aa	95	50.761	ENSAOCG00000006387	larp4ab	53	63.291	Amphiprion_ocellaris
ENSSLDG00000004942	larp4aa	100	92.222	ENSAPEG00000019058	larp4aa	100	92.222	Amphiprion_percula
ENSSLDG00000004942	larp4aa	95	49.554	ENSATEG00000001018	larp4ab	53	58.354	Anabas_testudineus
ENSSLDG00000004942	larp4aa	100	90.452	ENSATEG00000020715	larp4aa	100	90.075	Anabas_testudineus
ENSSLDG00000004942	larp4aa	95	49.874	ENSAPLG00000013661	LARP4	51	65.885	Anas_platyrhynchos
ENSSLDG00000004942	larp4aa	95	50.510	ENSACAG00000017133	LARP4	96	48.790	Anolis_carolinensis
ENSSLDG00000004942	larp4aa	82	63.539	ENSANAG00000029342	LARP4	96	63.228	Aotus_nancymaae
ENSSLDG00000004942	larp4aa	100	87.469	ENSACLG00000002575	larp4aa	100	86.732	Astatotilapia_calliptera
ENSSLDG00000004942	larp4aa	100	52.210	ENSAMXG00000001515	larp4ab	54	66.977	Astyanax_mexicanus
ENSSLDG00000004942	larp4aa	100	65.228	ENSAMXG00000036493	larp4aa	100	65.108	Astyanax_mexicanus
ENSSLDG00000004942	larp4aa	82	63.271	ENSCJAG00000021131	LARP4	98	61.323	Callithrix_jacchus
ENSSLDG00000004942	larp4aa	82	62.366	ENSCAFG00020014554	LARP4	88	62.366	Canis_lupus_dingo
ENSSLDG00000004942	larp4aa	95	51.306	ENSTSYG00000004342	LARP4	96	62.865	Carlito_syrichta
ENSSLDG00000004942	larp4aa	94	36.304	ENSCAPG00000012942	LARP4	79	57.692	Cavia_aperea
ENSSLDG00000004942	larp4aa	95	44.473	ENSCPOG00000020519	LARP4	51	56.848	Cavia_porcellus
ENSSLDG00000004942	larp4aa	95	54.262	ENSCCAG00000024439	LARP4	96	62.698	Cebus_capucinus
ENSSLDG00000004942	larp4aa	95	46.803	ENSCATG00000044528	LARP4	52	60.779	Cercocebus_atys
ENSSLDG00000004942	larp4aa	95	44.430	ENSCANG00000033097	-	90	59.880	Colobus_angolensis_palliatus
ENSSLDG00000004942	larp4aa	82	63.539	ENSCANG00000029159	-	96	63.636	Colobus_angolensis_palliatus
ENSSLDG00000004942	larp4aa	95	48.799	ENSCGRG00001010818	Larp4	52	64.660	Cricetulus_griseus_chok1gshd
ENSSLDG00000004942	larp4aa	95	48.799	ENSCGRG00000009382	Larp4	52	64.660	Cricetulus_griseus_crigri
ENSSLDG00000004942	larp4aa	100	87.897	ENSCSEG00000001963	larp4aa	100	87.775	Cynoglossus_semilaevis
ENSSLDG00000004942	larp4aa	100	85.591	ENSCVAG00000005488	larp4aa	100	85.591	Cyprinodon_variegatus
ENSSLDG00000004942	larp4aa	100	63.480	ENSDARG00000078401	larp4aa	100	62.636	Danio_rerio
ENSSLDG00000004942	larp4aa	95	52.760	ENSDARG00000074979	larp4ab	83	81.633	Danio_rerio
ENSSLDG00000004942	larp4aa	95	48.342	ENSDNOG00000038525	LARP4	52	62.240	Dasypus_novemcinctus
ENSSLDG00000004942	larp4aa	84	58.333	ENSDORG00000004013	Larp4	88	58.333	Dipodomys_ordii
ENSSLDG00000004942	larp4aa	69	54.779	ENSETEG00000011683	LARP4	72	54.779	Echinops_telfairi
ENSSLDG00000004942	larp4aa	67	39.825	ENSEBUG00000004426	LARP4	67	45.013	Eptatretus_burgeri
ENSSLDG00000004942	larp4aa	65	59.244	ENSEASG00005004356	LARP4	82	61.420	Equus_asinus_asinus
ENSSLDG00000004942	larp4aa	69	85.470	ENSEEUG00000000316	LARP4	52	85.470	Erinaceus_europaeus
ENSSLDG00000004942	larp4aa	100	62.007	ENSELUG00000000395	larp4aa	100	61.118	Esox_lucius
ENSSLDG00000004942	larp4aa	95	52.406	ENSELUG00000018650	larp4ab	75	80.263	Esox_lucius
ENSSLDG00000004942	larp4aa	82	63.032	ENSFCAG00000031897	LARP4	96	63.130	Felis_catus
ENSSLDG00000004942	larp4aa	80	51.818	ENSFALG00000002114	LARP4	57	65.365	Ficedula_albicollis
ENSSLDG00000004942	larp4aa	100	83.678	ENSFHEG00000004338	larp4aa	100	83.557	Fundulus_heteroclitus
ENSSLDG00000004942	larp4aa	95	46.479	ENSFHEG00000013854	larp4ab	99	45.663	Fundulus_heteroclitus
ENSSLDG00000004942	larp4aa	100	73.935	ENSGMOG00000008246	larp4aa	100	71.411	Gadus_morhua
ENSSLDG00000004942	larp4aa	91	48.939	ENSGALG00000042122	LARP4	50	66.146	Gallus_gallus
ENSSLDG00000004942	larp4aa	95	47.949	ENSGAFG00000021777	larp4ab	99	45.592	Gambusia_affinis
ENSSLDG00000004942	larp4aa	100	83.980	ENSGACG00000008381	larp4aa	98	92.265	Gasterosteus_aculeatus
ENSSLDG00000004942	larp4aa	95	49.032	ENSGACG00000000680	larp4ab	88	64.075	Gasterosteus_aculeatus
ENSSLDG00000004942	larp4aa	95	50.824	ENSGAGG00000006969	LARP4	51	65.885	Gopherus_agassizii
ENSSLDG00000004942	larp4aa	95	46.752	ENSGGOG00000015230	LARP4	82	66.981	Gorilla_gorilla
ENSSLDG00000004942	larp4aa	100	87.224	ENSHBUG00000023074	larp4aa	100	86.486	Haplochromis_burtoni
ENSSLDG00000004942	larp4aa	95	47.104	ENSHGLG00100011678	-	54	61.499	Heterocephalus_glaber_male
ENSSLDG00000004942	larp4aa	100	77.065	ENSHCOG00000015951	larp4aa	100	77.435	Hippocampus_comes
ENSSLDG00000004942	larp4aa	95	46.348	ENSHCOG00000020857	larp4ab	100	44.051	Hippocampus_comes
ENSSLDG00000004942	larp4aa	95	49.042	ENSIPUG00000021659	larp4ab	54	62.735	Ictalurus_punctatus
ENSSLDG00000004942	larp4aa	100	62.530	ENSIPUG00000007514	larp4aa	100	62.094	Ictalurus_punctatus
ENSSLDG00000004942	larp4aa	100	86.067	ENSKMAG00000006800	larp4aa	100	85.203	Kryptolebias_marmoratus
ENSSLDG00000004942	larp4aa	95	48.977	ENSKMAG00000018556	larp4ab	100	47.414	Kryptolebias_marmoratus
ENSSLDG00000004942	larp4aa	95	49.936	ENSLBEG00000019306	larp4ab	100	49.116	Labrus_bergylta
ENSSLDG00000004942	larp4aa	97	89.206	ENSLBEG00000014537	larp4aa	100	87.143	Labrus_bergylta
ENSSLDG00000004942	larp4aa	99	50.896	ENSLACG00000019090	LARP4	55	64.251	Latimeria_chalumnae
ENSSLDG00000004942	larp4aa	100	60.753	ENSLOCG00000007113	larp4ab	100	61.220	Lepisosteus_oculatus
ENSSLDG00000004942	larp4aa	81	47.352	ENSLAFG00000005160	LARP4	84	74.800	Loxodonta_africana
ENSSLDG00000004942	larp4aa	82	63.539	ENSMFAG00000043681	LARP4	96	63.636	Macaca_fascicularis
ENSSLDG00000004942	larp4aa	82	63.539	ENSMMUG00000008172	LARP4	96	63.636	Macaca_mulatta
ENSSLDG00000004942	larp4aa	83	46.698	ENSMNEG00000037799	-	84	75.862	Macaca_nemestrina
ENSSLDG00000004942	larp4aa	94	47.334	ENSMNEG00000034602	LARP4	50	62.060	Macaca_nemestrina
ENSSLDG00000004942	larp4aa	87	62.082	ENSMLEG00000039661	LARP4	96	63.636	Mandrillus_leucophaeus
ENSSLDG00000004942	larp4aa	100	91.122	ENSMAMG00000011206	larp4aa	100	90.752	Mastacembelus_armatus
ENSSLDG00000004942	larp4aa	95	50.960	ENSMAMG00000002616	larp4ab	100	50.578	Mastacembelus_armatus
ENSSLDG00000004942	larp4aa	100	87.715	ENSMZEG00005001813	larp4aa	100	86.855	Maylandia_zebra
ENSSLDG00000004942	larp4aa	91	47.341	ENSMGAG00000010598	LARP4	50	66.146	Meleagris_gallopavo
ENSSLDG00000004942	larp4aa	65	78.151	ENSMICG00000030156	-	75	78.151	Microcebus_murinus
ENSSLDG00000004942	larp4aa	69	76.538	ENSMICG00000012388	-	93	76.628	Microcebus_murinus
ENSSLDG00000004942	larp4aa	82	64.516	ENSMOCG00000020635	Larp4	85	68.038	Microtus_ochrogaster
ENSSLDG00000004942	larp4aa	100	82.331	ENSMMOG00000004785	larp4aa	100	81.472	Mola_mola
ENSSLDG00000004942	larp4aa	95	47.294	ENSMMOG00000021861	larp4ab	97	56.836	Mola_mola
ENSSLDG00000004942	larp4aa	72	63.580	MGP_CAROLIEiJ_G0020281	Larp4	83	63.467	Mus_caroli
ENSSLDG00000004942	larp4aa	82	64.420	ENSMUSG00000023025	Larp4	87	67.823	Mus_musculus
ENSSLDG00000004942	larp4aa	84	63.684	MGP_PahariEiJ_G0020284	Larp4	88	63.684	Mus_pahari
ENSSLDG00000004942	larp4aa	100	87.469	ENSNBRG00000011292	larp4aa	100	86.732	Neolamprologus_brichardi
ENSSLDG00000004942	larp4aa	87	61.710	ENSNLEG00000017798	LARP4	96	63.102	Nomascus_leucogenys
ENSSLDG00000004942	larp4aa	95	47.809	ENSODEG00000009770	LARP4	89	62.468	Octodon_degus
ENSSLDG00000004942	larp4aa	95	47.066	ENSONIG00000019124	larp4ab	87	62.667	Oreochromis_niloticus
ENSSLDG00000004942	larp4aa	100	88.206	ENSONIG00000011895	larp4aa	100	87.578	Oreochromis_niloticus
ENSSLDG00000004942	larp4aa	68	52.522	ENSOANG00000004373	LARP4	67	61.358	Ornithorhynchus_anatinus
ENSSLDG00000004942	larp4aa	95	47.954	ENSOCUG00000021417	-	52	61.518	Oryctolagus_cuniculus
ENSSLDG00000004942	larp4aa	95	48.601	ENSOCUG00000026872	-	52	62.597	Oryctolagus_cuniculus
ENSSLDG00000004942	larp4aa	100	80.888	ENSORLG00000006758	larp4aa	100	79.655	Oryzias_latipes
ENSSLDG00000004942	larp4aa	100	80.395	ENSORLG00020010258	larp4aa	100	79.285	Oryzias_latipes_hni
ENSSLDG00000004942	larp4aa	100	79.901	ENSORLG00015002292	larp4aa	100	78.792	Oryzias_latipes_hsok
ENSSLDG00000004942	larp4aa	100	76.138	ENSOMEG00000019749	larp4aa	96	86.158	Oryzias_melastigma
ENSSLDG00000004942	larp4aa	68	62.500	ENSPPAG00000035100	LARP4	87	62.169	Pan_paniscus
ENSSLDG00000004942	larp4aa	82	63.032	ENSPPRG00000004522	LARP4	96	63.130	Panthera_pardus
ENSSLDG00000004942	larp4aa	82	63.032	ENSPTIG00000015617	LARP4	96	63.130	Panthera_tigris_altaica
ENSSLDG00000004942	larp4aa	87	60.967	ENSPTRG00000004935	LARP4	96	62.567	Pan_troglodytes
ENSSLDG00000004942	larp4aa	87	62.082	ENSPANG00000022964	LARP4	96	63.636	Papio_anubis
ENSSLDG00000004942	larp4aa	100	59.712	ENSPKIG00000005950	larp4ab	100	58.633	Paramormyrops_kingsleyae
ENSSLDG00000004942	larp4aa	85	64.122	ENSPSIG00000015867	LARP4	88	64.122	Pelodiscus_sinensis
ENSSLDG00000004942	larp4aa	96	49.745	ENSPCIG00000000384	LARP4	99	50.000	Phascolarctos_cinereus
ENSSLDG00000004942	larp4aa	95	47.625	ENSPFOG00000009764	larp4ab	99	45.696	Poecilia_formosa
ENSSLDG00000004942	larp4aa	100	85.031	ENSPFOG00000013148	larp4aa	100	86.012	Poecilia_formosa
ENSSLDG00000004942	larp4aa	95	47.389	ENSPLAG00000008502	larp4ab	99	46.203	Poecilia_latipinna
ENSSLDG00000004942	larp4aa	100	84.769	ENSPLAG00000013626	larp4aa	100	85.768	Poecilia_latipinna
ENSSLDG00000004942	larp4aa	95	47.564	ENSPMEG00000002720	larp4ab	99	46.193	Poecilia_mexicana
ENSSLDG00000004942	larp4aa	100	84.908	ENSPMEG00000014271	larp4aa	100	86.012	Poecilia_mexicana
ENSSLDG00000004942	larp4aa	100	84.750	ENSPREG00000022597	larp4aa	100	85.750	Poecilia_reticulata
ENSSLDG00000004942	larp4aa	64	54.614	ENSPPYG00000004512	-	73	62.338	Pongo_abelii
ENSSLDG00000004942	larp4aa	73	66.667	ENSPCAG00000003671	LARP4	80	66.667	Procavia_capensis
ENSSLDG00000004942	larp4aa	82	63.271	ENSPCOG00000026291	LARP4	96	63.569	Propithecus_coquereli
ENSSLDG00000004942	larp4aa	100	87.469	ENSPNYG00000022265	larp4aa	100	86.732	Pundamilia_nyererei
ENSSLDG00000004942	larp4aa	97	63.342	ENSPNAG00000024770	larp4aa	99	62.718	Pygocentrus_nattereri
ENSSLDG00000004942	larp4aa	96	54.172	ENSPNAG00000014478	larp4ab	99	54.214	Pygocentrus_nattereri
ENSSLDG00000004942	larp4aa	81	55.102	ENSRBIG00000038857	-	90	63.265	Rhinopithecus_bieti
ENSSLDG00000004942	larp4aa	68	54.023	ENSRBIG00000036890	-	80	54.023	Rhinopithecus_bieti
ENSSLDG00000004942	larp4aa	68	54.023	ENSRROG00000025487	-	92	56.041	Rhinopithecus_roxellana
ENSSLDG00000004942	larp4aa	87	62.082	ENSRROG00000042764	-	96	63.636	Rhinopithecus_roxellana
ENSSLDG00000004942	larp4aa	82	62.466	ENSSBOG00000026650	LARP4	96	62.567	Saimiri_boliviensis_boliviensis
ENSSLDG00000004942	larp4aa	100	60.366	ENSSFOG00015014096	larp4ab	100	59.685	Scleropages_formosus
ENSSLDG00000004942	larp4aa	99	61.266	ENSSFOG00015003868	larp4aa	59	72.600	Scleropages_formosus
ENSSLDG00000004942	larp4aa	95	49.873	ENSSMAG00000002838	larp4ab	100	49.682	Scophthalmus_maximus
ENSSLDG00000004942	larp4aa	100	91.502	ENSSMAG00000019473	larp4aa	100	91.133	Scophthalmus_maximus
ENSSLDG00000004942	larp4aa	95	51.588	ENSSDUG00000006655	larp4ab	100	51.838	Seriola_dumerili
ENSSLDG00000004942	larp4aa	100	99.136	ENSSDUG00000010621	larp4aa	100	99.136	Seriola_dumerili
ENSSLDG00000004942	larp4aa	63	61.697	ENSSARG00000012469	LARP4	68	61.697	Sorex_araneus
ENSSLDG00000004942	larp4aa	90	47.550	ENSSPUG00000016552	LARP4	50	64.062	Sphenodon_punctatus
ENSSLDG00000004942	larp4aa	95	50.575	ENSSPAG00000002172	larp4ab	53	62.944	Stegastes_partitus
ENSSLDG00000004942	larp4aa	87	95.588	ENSSPAG00000007222	larp4aa	94	95.588	Stegastes_partitus
ENSSLDG00000004942	larp4aa	57	66.667	ENSSSCG00000028516	LARP4	77	66.667	Sus_scrofa
ENSSLDG00000004942	larp4aa	95	48.524	ENSTGUG00000003479	LARP4	52	65.365	Taeniopygia_guttata
ENSSLDG00000004942	larp4aa	65	54.104	ENSTRUG00000007206	larp4ab	100	45.870	Takifugu_rubripes
ENSSLDG00000004942	larp4aa	95	78.732	ENSTNIG00000015109	larp4aa	99	78.468	Tetraodon_nigroviridis
ENSSLDG00000004942	larp4aa	95	45.051	ENSTNIG00000014571	larp4ab	54	60.052	Tetraodon_nigroviridis
ENSSLDG00000004942	larp4aa	79	52.464	ENSTBEG00000005167	LARP4	82	52.464	Tupaia_belangeri
ENSSLDG00000004942	larp4aa	95	47.776	ENSTTRG00000003764	LARP4	52	62.211	Tursiops_truncatus
ENSSLDG00000004942	larp4aa	69	66.871	ENSVVUG00000024717	LARP4	81	66.871	Vulpes_vulpes
ENSSLDG00000004942	larp4aa	100	79.509	ENSXCOG00000006387	larp4aa	100	80.491	Xiphophorus_couchianus
ENSSLDG00000004942	larp4aa	95	47.765	ENSXMAG00000002156	larp4ab	99	46.329	Xiphophorus_maculatus
ENSSLDG00000004942	larp4aa	100	85.890	ENSXMAG00000010519	larp4aa	100	85.890	Xiphophorus_maculatus