EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000004960 (Gene tree)
Gene ID: -
Gene Symbol: hbs1l
Alias: wu:fc23c07|zgc:55400
Full Name: HBS1 like translational GTPase
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 22359 bases
Position: chrPEQF01098010.1:86328-108686
Accession: 111651217
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000006284	GTP_EFTU	PF00009.27	2.7e-47	1	1
ENSSLDP00000006271	GTP_EFTU	PF00009.27	3.4e-47	1	1
ENSSLDP00000006271	MMR_HSR1	PF01926.23	3.7e-06	1	1
ENSSLDP00000006284	GTP_EFTU_D2	PF03144.25	2.2e-08	1	1
ENSSLDP00000006271	GTP_EFTU_D2	PF03144.25	2.4e-08	1	1
ENSSLDP00000006284	GTP_EFTU_D3	PF03143.17	1.6e-27	1	1
ENSSLDP00000006271	GTP_EFTU_D3	PF03143.17	1.7e-27	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000006486	-	5812	XM_023401177	ENSSLDP00000006271	700 (aa)	XP_023256945	UPI000C6F79EB
ENSSLDT00000006499	-	1854	-	ENSSLDP00000006284	617 (aa)	-	-

Gene Model

Click here to download ENSSLDG00000004960's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000004960's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000004960	hbs1l	69	41.379	ENSSLDG00000017189	EEF1A1	94	41.379
ENSSLDG00000004960	hbs1l	68	40.941	ENSSLDG00000008363	GSPT1	72	40.941
ENSSLDG00000004960	hbs1l	69	41.149	ENSSLDG00000006378	eef1a1b	94	41.149
ENSSLDG00000004960	hbs1l	68	41.176	ENSSLDG00000009000	gspt1l	75	41.176
ENSSLDG00000004960	hbs1l	69	37.900	ENSSLDG00000023761	si:dkey-37o8.1	95	37.900
ENSSLDG00000004960	hbs1l	69	41.839	ENSSLDG00000019156	-	94	41.839

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000004960	hbs1l	99	77.716	ENSG00000112339	HBS1L	95	86.335	Homo_sapiens
ENSSLDG00000004960	hbs1l	93	76.733	ENSAPOG00000013169	hbs1l	97	76.425	Acanthochromis_polyacanthus
ENSSLDG00000004960	hbs1l	99	72.214	ENSAMEG00000009749	HBS1L	99	71.368	Ailuropoda_melanoleuca
ENSSLDG00000004960	hbs1l	87	92.007	ENSACIG00000017087	hbs1l	91	92.007	Amphilophus_citrinellus
ENSSLDG00000004960	hbs1l	99	95.181	ENSAPEG00000008320	hbs1l	100	89.331	Amphiprion_percula
ENSSLDG00000004960	hbs1l	99	94.063	ENSATEG00000004459	hbs1l	99	94.063	Anabas_testudineus
ENSSLDG00000004960	hbs1l	98	70.690	ENSAPLG00000007791	HBS1L	100	70.259	Anas_platyrhynchos
ENSSLDG00000004960	hbs1l	100	72.096	ENSACAG00000010120	HBS1L	100	72.096	Anolis_carolinensis
ENSSLDG00000004960	hbs1l	99	77.778	ENSANAG00000038076	HBS1L	95	81.250	Aotus_nancymaae
ENSSLDG00000004960	hbs1l	100	90.043	ENSACLG00000010469	hbs1l	100	89.900	Astatotilapia_calliptera
ENSSLDG00000004960	hbs1l	100	79.577	ENSAMXG00000004260	hbs1l	97	85.634	Astyanax_mexicanus
ENSSLDG00000004960	hbs1l	98	80.038	ENSBTAG00000020174	HBS1L	100	71.853	Bos_taurus
ENSSLDG00000004960	hbs1l	99	39.937	WBGene00010622	K07A12.4	99	40.031	Caenorhabditis_elegans
ENSSLDG00000004960	hbs1l	99	77.675	ENSCJAG00000007678	HBS1L	94	81.250	Callithrix_jacchus
ENSSLDG00000004960	hbs1l	100	71.388	ENSCAFG00000000226	HBS1L	100	70.680	Canis_familiaris
ENSSLDG00000004960	hbs1l	100	71.388	ENSCAFG00020021904	HBS1L	100	70.680	Canis_lupus_dingo
ENSSLDG00000004960	hbs1l	98	79.658	ENSCHIG00000010299	HBS1L	100	71.570	Capra_hircus
ENSSLDG00000004960	hbs1l	98	79.245	ENSTSYG00000007089	HBS1L	99	74.598	Carlito_syrichta
ENSSLDG00000004960	hbs1l	98	68.381	ENSCPOG00000007015	HBS1L	86	79.167	Cavia_porcellus
ENSSLDG00000004960	hbs1l	98	78.491	ENSCCAG00000033863	HBS1L	99	73.515	Cebus_capucinus
ENSSLDG00000004960	hbs1l	99	78.004	ENSCATG00000043042	HBS1L	97	75.645	Cercocebus_atys
ENSSLDG00000004960	hbs1l	98	78.517	ENSCLAG00000004937	HBS1L	100	71.004	Chinchilla_lanigera
ENSSLDG00000004960	hbs1l	99	77.819	ENSCSAG00000016791	HBS1L	100	71.328	Chlorocebus_sabaeus
ENSSLDG00000004960	hbs1l	94	71.429	ENSCHOG00000001852	HBS1L	87	78.125	Choloepus_hoffmanni
ENSSLDG00000004960	hbs1l	99	78.004	ENSCPBG00000017635	HBS1L	100	71.711	Chrysemys_picta_bellii
ENSSLDG00000004960	hbs1l	99	47.940	ENSCING00000005592	-	99	47.802	Ciona_intestinalis
ENSSLDG00000004960	hbs1l	92	59.381	ENSCSAVG00000002297	-	99	60.000	Ciona_savignyi
ENSSLDG00000004960	hbs1l	99	77.634	ENSCANG00000031208	HBS1L	93	81.250	Colobus_angolensis_palliatus
ENSSLDG00000004960	hbs1l	100	72.535	ENSCGRG00001024531	Hbs1l	100	71.831	Cricetulus_griseus_chok1gshd
ENSSLDG00000004960	hbs1l	100	72.535	ENSCGRG00000017361	Hbs1l	100	71.831	Cricetulus_griseus_crigri
ENSSLDG00000004960	hbs1l	99	88.235	ENSCSEG00000002794	hbs1l	94	87.642	Cynoglossus_semilaevis
ENSSLDG00000004960	hbs1l	100	85.633	ENSCVAG00000001462	hbs1l	100	85.633	Cyprinodon_variegatus
ENSSLDG00000004960	hbs1l	96	86.989	ENSDARG00000036778	hbs1l	100	79.349	Danio_rerio
ENSSLDG00000004960	hbs1l	99	77.778	ENSDORG00000005958	Hbs1l	100	71.348	Dipodomys_ordii
ENSSLDG00000004960	hbs1l	94	51.371	FBgn0042712	HBS1	100	46.250	Drosophila_melanogaster
ENSSLDG00000004960	hbs1l	99	70.956	ENSETEG00000000913	HBS1L	86	81.250	Echinops_telfairi
ENSSLDG00000004960	hbs1l	99	65.877	ENSEBUG00000010759	hbs1l	100	64.782	Eptatretus_burgeri
ENSSLDG00000004960	hbs1l	100	71.751	ENSEASG00005011148	HBS1L	100	70.787	Equus_asinus_asinus
ENSSLDG00000004960	hbs1l	99	73.297	ENSECAG00000004470	HBS1L	100	71.045	Equus_caballus
ENSSLDG00000004960	hbs1l	100	67.842	ENSEEUG00000013582	HBS1L	100	67.792	Erinaceus_europaeus
ENSSLDG00000004960	hbs1l	91	76.543	ENSELUG00000006444	hbs1l	96	76.543	Esox_lucius
ENSSLDG00000004960	hbs1l	99	76.726	ENSFCAG00000001810	HBS1L	100	80.077	Felis_catus
ENSSLDG00000004960	hbs1l	87	78.889	ENSFALG00000011898	HBS1L	100	73.008	Ficedula_albicollis
ENSSLDG00000004960	hbs1l	98	79.429	ENSFDAG00000011841	HBS1L	100	71.570	Fukomys_damarensis
ENSSLDG00000004960	hbs1l	100	87.607	ENSFHEG00000006942	hbs1l	100	87.607	Fundulus_heteroclitus
ENSSLDG00000004960	hbs1l	99	79.433	ENSGMOG00000011843	hbs1l	100	79.433	Gadus_morhua
ENSSLDG00000004960	hbs1l	100	72.881	ENSGALG00000013962	HBS1L	100	71.893	Gallus_gallus
ENSSLDG00000004960	hbs1l	100	87.767	ENSGAFG00000004157	hbs1l	100	87.767	Gambusia_affinis
ENSSLDG00000004960	hbs1l	99	86.060	ENSGACG00000011035	hbs1l	100	86.350	Gasterosteus_aculeatus
ENSSLDG00000004960	hbs1l	99	77.819	ENSGAGG00000002033	HBS1L	100	70.621	Gopherus_agassizii
ENSSLDG00000004960	hbs1l	87	73.616	ENSGGOG00000034956	-	93	82.796	Gorilla_gorilla
ENSSLDG00000004960	hbs1l	100	90.043	ENSHBUG00000013424	hbs1l	100	90.043	Haplochromis_burtoni
ENSSLDG00000004960	hbs1l	99	77.922	ENSHGLG00000000516	HBS1L	100	71.246	Heterocephalus_glaber_female
ENSSLDG00000004960	hbs1l	99	77.922	ENSHGLG00100003550	HBS1L	100	71.246	Heterocephalus_glaber_male
ENSSLDG00000004960	hbs1l	99	92.771	ENSHCOG00000007581	hbs1l	94	83.548	Hippocampus_comes
ENSSLDG00000004960	hbs1l	100	78.582	ENSIPUG00000010748	hbs1l	100	78.156	Ictalurus_punctatus
ENSSLDG00000004960	hbs1l	99	77.491	ENSSTOG00000007551	HBS1L	100	71.429	Ictidomys_tridecemlineatus
ENSSLDG00000004960	hbs1l	100	56.011	ENSJJAG00000012660	-	100	55.446	Jaculus_jaculus
ENSSLDG00000004960	hbs1l	99	69.448	ENSJJAG00000017024	-	97	69.504	Jaculus_jaculus
ENSSLDG00000004960	hbs1l	99	90.361	ENSKMAG00000012130	hbs1l	100	88.478	Kryptolebias_marmoratus
ENSSLDG00000004960	hbs1l	99	95.181	ENSLBEG00000002784	hbs1l	100	95.181	Labrus_bergylta
ENSSLDG00000004960	hbs1l	78	78.776	ENSLACG00000004528	HBS1L	99	78.776	Latimeria_chalumnae
ENSSLDG00000004960	hbs1l	99	81.006	ENSLOCG00000016221	hbs1l	100	74.614	Lepisosteus_oculatus
ENSSLDG00000004960	hbs1l	100	69.394	ENSLAFG00000007835	HBS1L	86	86.667	Loxodonta_africana
ENSSLDG00000004960	hbs1l	99	77.413	ENSMFAG00000003766	HBS1L	95	81.250	Macaca_fascicularis
ENSSLDG00000004960	hbs1l	99	76.329	ENSMMUG00000004802	HBS1L	98	78.558	Macaca_mulatta
ENSSLDG00000004960	hbs1l	99	77.413	ENSMNEG00000043942	HBS1L	95	81.250	Macaca_nemestrina
ENSSLDG00000004960	hbs1l	99	77.819	ENSMLEG00000043218	HBS1L	97	75.484	Mandrillus_leucophaeus
ENSSLDG00000004960	hbs1l	99	92.791	ENSMAMG00000016498	hbs1l	100	91.335	Mastacembelus_armatus
ENSSLDG00000004960	hbs1l	87	91.806	ENSMZEG00005024018	-	90	92.007	Maylandia_zebra
ENSSLDG00000004960	hbs1l	100	90.043	ENSMZEG00005015575	hbs1l	100	89.900	Maylandia_zebra
ENSSLDG00000004960	hbs1l	99	71.408	ENSMGAG00000013065	HBS1L	99	70.413	Meleagris_gallopavo
ENSSLDG00000004960	hbs1l	99	78.743	ENSMAUG00000001077	Hbs1l	100	71.671	Mesocricetus_auratus
ENSSLDG00000004960	hbs1l	99	67.096	ENSMICG00000030043	-	96	80.645	Microcebus_murinus
ENSSLDG00000004960	hbs1l	99	70.561	ENSMICG00000001533	-	99	70.249	Microcebus_murinus
ENSSLDG00000004960	hbs1l	99	78.453	ENSMOCG00000023038	Hbs1l	100	71.610	Microtus_ochrogaster
ENSSLDG00000004960	hbs1l	97	90.776	ENSMMOG00000015507	hbs1l	100	90.776	Mola_mola
ENSSLDG00000004960	hbs1l	100	71.893	ENSMODG00000017499	HBS1L	100	71.893	Monodelphis_domestica
ENSSLDG00000004960	hbs1l	99	94.175	ENSMALG00000010768	hbs1l	99	94.249	Monopterus_albus
ENSSLDG00000004960	hbs1l	100	71.489	MGP_CAROLIEiJ_G0015162	Hbs1l	100	70.646	Mus_caroli
ENSSLDG00000004960	hbs1l	98	78.947	ENSMUSG00000019977	Hbs1l	100	90.323	Mus_musculus
ENSSLDG00000004960	hbs1l	100	70.810	MGP_PahariEiJ_G0023782	Hbs1l	100	70.112	Mus_pahari
ENSSLDG00000004960	hbs1l	100	71.489	MGP_SPRETEiJ_G0015970	Hbs1l	100	70.787	Mus_spretus
ENSSLDG00000004960	hbs1l	100	72.238	ENSMPUG00000014810	HBS1L	100	71.671	Mustela_putorius_furo
ENSSLDG00000004960	hbs1l	100	71.045	ENSMLUG00000010618	HBS1L	100	70.339	Myotis_lucifugus
ENSSLDG00000004960	hbs1l	99	78.044	ENSNGAG00000015184	Hbs1l	100	71.711	Nannospalax_galili
ENSSLDG00000004960	hbs1l	100	89.758	ENSNBRG00000020095	hbs1l	100	90.976	Neolamprologus_brichardi
ENSSLDG00000004960	hbs1l	99	76.980	ENSNLEG00000014721	HBS1L	94	81.250	Nomascus_leucogenys
ENSSLDG00000004960	hbs1l	82	82.234	ENSMEUG00000003907	HBS1L	81	82.234	Notamacropus_eugenii
ENSSLDG00000004960	hbs1l	85	77.500	ENSOPRG00000013595	HBS1L	76	77.500	Ochotona_princeps
ENSSLDG00000004960	hbs1l	99	71.124	ENSODEG00000008959	HBS1L	100	70.622	Octodon_degus
ENSSLDG00000004960	hbs1l	100	89.758	ENSONIG00000000460	hbs1l	100	89.250	Oreochromis_niloticus
ENSSLDG00000004960	hbs1l	99	71.004	ENSOANG00000002684	-	99	70.339	Ornithorhynchus_anatinus
ENSSLDG00000004960	hbs1l	99	74.074	ENSOCUG00000011619	HBS1L	99	69.634	Oryctolagus_cuniculus
ENSSLDG00000004960	hbs1l	99	88.497	ENSORLG00000016559	hbs1l	100	85.775	Oryzias_latipes
ENSSLDG00000004960	hbs1l	99	88.683	ENSORLG00020003827	hbs1l	100	85.917	Oryzias_latipes_hni
ENSSLDG00000004960	hbs1l	99	88.126	ENSORLG00015023105	hbs1l	100	85.633	Oryzias_latipes_hsok
ENSSLDG00000004960	hbs1l	99	89.425	ENSOMEG00000016715	hbs1l	100	86.344	Oryzias_melastigma
ENSSLDG00000004960	hbs1l	99	78.085	ENSOGAG00000012604	HBS1L	100	71.853	Otolemur_garnettii
ENSSLDG00000004960	hbs1l	97	79.810	ENSOARG00000014798	-	99	71.773	Ovis_aries
ENSSLDG00000004960	hbs1l	98	79.658	ENSOARG00000005671	-	100	71.429	Ovis_aries
ENSSLDG00000004960	hbs1l	99	78.004	ENSPPAG00000029900	HBS1L	93	81.250	Pan_paniscus
ENSSLDG00000004960	hbs1l	99	76.651	ENSPPRG00000005285	HBS1L	95	81.250	Panthera_pardus
ENSSLDG00000004960	hbs1l	99	76.812	ENSPTIG00000015803	HBS1L	95	81.250	Panthera_tigris_altaica
ENSSLDG00000004960	hbs1l	99	78.004	ENSPTRG00000018630	HBS1L	93	81.250	Pan_troglodytes
ENSSLDG00000004960	hbs1l	99	78.004	ENSPANG00000007075	HBS1L	97	75.645	Papio_anubis
ENSSLDG00000004960	hbs1l	99	80.591	ENSPKIG00000023171	hbs1l	97	78.744	Paramormyrops_kingsleyae
ENSSLDG00000004960	hbs1l	84	76.139	ENSPSIG00000016467	HBS1L	97	68.189	Pelodiscus_sinensis
ENSSLDG00000004960	hbs1l	99	82.571	ENSPMGG00000018051	hbs1l	96	91.489	Periophthalmus_magnuspinnatus
ENSSLDG00000004960	hbs1l	100	72.254	ENSPEMG00000014369	Hbs1l	100	71.549	Peromyscus_maniculatus_bairdii
ENSSLDG00000004960	hbs1l	99	72.523	ENSPMAG00000002516	hbs1l	100	64.124	Petromyzon_marinus
ENSSLDG00000004960	hbs1l	99	89.981	ENSPFOG00000021764	hbs1l	100	87.660	Poecilia_formosa
ENSSLDG00000004960	hbs1l	99	90.167	ENSPLAG00000006193	hbs1l	100	88.051	Poecilia_latipinna
ENSSLDG00000004960	hbs1l	99	90.167	ENSPMEG00000000925	hbs1l	100	88.051	Poecilia_mexicana
ENSSLDG00000004960	hbs1l	99	89.739	ENSPREG00000011270	hbs1l	100	87.198	Poecilia_reticulata
ENSSLDG00000004960	hbs1l	99	77.348	ENSPPYG00000017027	HBS1L	100	70.863	Pongo_abelii
ENSSLDG00000004960	hbs1l	86	76.852	ENSPCAG00000007002	HBS1L	79	77.079	Procavia_capensis
ENSSLDG00000004960	hbs1l	95	76.762	ENSPVAG00000015229	HBS1L	85	76.111	Pteropus_vampyrus
ENSSLDG00000004960	hbs1l	100	89.900	ENSPNYG00000013360	hbs1l	100	89.758	Pundamilia_nyererei
ENSSLDG00000004960	hbs1l	99	81.029	ENSPNAG00000026721	hbs1l	100	79.296	Pygocentrus_nattereri
ENSSLDG00000004960	hbs1l	98	78.358	ENSRNOG00000014531	Hbs1l	100	70.126	Rattus_norvegicus
ENSSLDG00000004960	hbs1l	99	77.901	ENSRBIG00000004484	HBS1L	100	71.711	Rhinopithecus_bieti
ENSSLDG00000004960	hbs1l	99	78.004	ENSRROG00000026176	HBS1L	97	75.484	Rhinopithecus_roxellana
ENSSLDG00000004960	hbs1l	73	37.500	YKR084C	-	76	37.553	Saccharomyces_cerevisiae
ENSSLDG00000004960	hbs1l	98	70.377	ENSSBOG00000016930	-	98	78.723	Saimiri_boliviensis_boliviensis
ENSSLDG00000004960	hbs1l	98	79.545	ENSSBOG00000019696	-	95	81.250	Saimiri_boliviensis_boliviensis
ENSSLDG00000004960	hbs1l	99	77.778	ENSSHAG00000013509	HBS1L	100	71.711	Sarcophilus_harrisii
ENSSLDG00000004960	hbs1l	99	79.670	ENSSFOG00015017544	hbs1l	96	75.249	Scleropages_formosus
ENSSLDG00000004960	hbs1l	100	89.189	ENSSMAG00000010621	hbs1l	100	89.474	Scophthalmus_maximus
ENSSLDG00000004960	hbs1l	100	99.143	ENSSDUG00000012974	hbs1l	100	99.143	Seriola_dumerili
ENSSLDG00000004960	hbs1l	98	70.870	ENSSARG00000006747	HBS1L	100	70.435	Sorex_araneus
ENSSLDG00000004960	hbs1l	99	76.753	ENSSPUG00000012389	HBS1L	99	70.213	Sphenodon_punctatus
ENSSLDG00000004960	hbs1l	96	78.544	ENSSSCG00000004169	HBS1L	100	71.081	Sus_scrofa
ENSSLDG00000004960	hbs1l	99	71.610	ENSTGUG00000011507	HBS1L	99	71.127	Taeniopygia_guttata
ENSSLDG00000004960	hbs1l	99	90.476	ENSTRUG00000016128	hbs1l	99	85.043	Takifugu_rubripes
ENSSLDG00000004960	hbs1l	99	85.021	ENSTNIG00000016320	hbs1l	99	85.021	Tetraodon_nigroviridis
ENSSLDG00000004960	hbs1l	93	86.486	ENSTBEG00000009950	HBS1L	85	86.486	Tupaia_belangeri
ENSSLDG00000004960	hbs1l	99	72.803	ENSTTRG00000003715	HBS1L	99	71.388	Tursiops_truncatus
ENSSLDG00000004960	hbs1l	100	72.433	ENSUAMG00000001064	HBS1L	100	71.589	Ursus_americanus
ENSSLDG00000004960	hbs1l	100	72.293	ENSUMAG00000024395	HBS1L	100	84.211	Ursus_maritimus
ENSSLDG00000004960	hbs1l	99	79.074	ENSVPAG00000006280	HBS1L	86	81.250	Vicugna_pacos
ENSSLDG00000004960	hbs1l	100	71.671	ENSVVUG00000000295	HBS1L	100	70.963	Vulpes_vulpes
ENSSLDG00000004960	hbs1l	97	79.592	ENSXETG00000003726	hbs1l	100	71.124	Xenopus_tropicalis
ENSSLDG00000004960	hbs1l	99	85.897	ENSXCOG00000005323	hbs1l	100	85.897	Xiphophorus_couchianus
ENSSLDG00000004960	hbs1l	100	88.193	ENSXMAG00000004359	hbs1l	100	88.193	Xiphophorus_maculatus