EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000005029 (Gene tree)
Gene ID: -
Gene Symbol: ythdf3
Alias: wu:fi35c09|zgc:55441
Full Name: YTH N6-methyladenosine RNA binding protein 3
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 7875 bases
Position: chrPEQF01099049.1:518027-525901
Accession: 111662832
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000006315	YTH	PF04146.15	2.8e-39	1	1
ENSSLDP00000006298	YTH	PF04146.15	3e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000006513	-	3489	XM_023416817	ENSSLDP00000006298	603 (aa)	XP_023272585	UPI000BBEE64C
ENSSLDT00000006530	-	1680	-	ENSSLDP00000006315	559 (aa)	-	-

Gene Model

Click here to download ENSSLDG00000005029's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000005029's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000005029	ythdf3	98	63.918	ENSSLDG00000019751	ythdf2	98	64.471
ENSSLDG00000005029	ythdf3	97	57.471	ENSSLDG00000024948	ythdf1	94	57.751
ENSSLDG00000005029	ythdf3	82	82.039	ENSSLDG00000001054	YTHDF1	95	85.922

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000005029	ythdf3	100	97.844	ENSAPOG00000024006	ythdf3	100	97.844	Acanthochromis_polyacanthus
ENSSLDG00000005029	ythdf3	99	96.595	ENSACIG00000022287	ythdf3	99	96.595	Amphilophus_citrinellus
ENSSLDG00000005029	ythdf3	100	97.844	ENSAOCG00000000723	ythdf3	100	97.844	Amphiprion_ocellaris
ENSSLDG00000005029	ythdf3	100	97.347	ENSAPEG00000020352	ythdf3	100	97.347	Amphiprion_percula
ENSSLDG00000005029	ythdf3	99	97.651	ENSATEG00000011478	ythdf3	97	100.000	Anabas_testudineus
ENSSLDG00000005029	ythdf3	53	94.595	ENSACLG00000026145	ythdf3	99	94.884	Astatotilapia_calliptera
ENSSLDG00000005029	ythdf3	97	80.836	ENSAMXG00000030366	ythdf3	99	79.232	Astyanax_mexicanus
ENSSLDG00000005029	ythdf3	66	54.404	ENSCGRG00000008289	-	93	63.248	Cricetulus_griseus_crigri
ENSSLDG00000005029	ythdf3	99	75.947	ENSCGRG00000005613	-	100	76.764	Cricetulus_griseus_crigri
ENSSLDG00000005029	ythdf3	100	96.358	ENSCSEG00000014861	ythdf3	99	96.358	Cynoglossus_semilaevis
ENSSLDG00000005029	ythdf3	100	92.040	ENSCVAG00000018114	ythdf3	96	96.429	Cyprinodon_variegatus
ENSSLDG00000005029	ythdf3	100	83.819	ENSELUG00000014824	ythdf3	100	81.199	Esox_lucius
ENSSLDG00000005029	ythdf3	100	93.864	ENSFHEG00000016395	ythdf3	100	93.986	Fundulus_heteroclitus
ENSSLDG00000005029	ythdf3	100	93.367	ENSGAFG00000006529	ythdf3	100	93.367	Gambusia_affinis
ENSSLDG00000005029	ythdf3	99	93.522	ENSGACG00000002998	ythdf3	99	93.355	Gasterosteus_aculeatus
ENSSLDG00000005029	ythdf3	98	89.005	ENSHBUG00000018631	ythdf3	99	94.572	Haplochromis_burtoni
ENSSLDG00000005029	ythdf3	100	81.463	ENSIPUG00000014157	YTHDF1	51	89.644	Ictalurus_punctatus
ENSSLDG00000005029	ythdf3	100	94.389	ENSKMAG00000008447	ythdf3	97	97.696	Kryptolebias_marmoratus
ENSSLDG00000005029	ythdf3	100	92.129	ENSLBEG00000017003	ythdf3	100	92.129	Labrus_bergylta
ENSSLDG00000005029	ythdf3	97	89.691	ENSMAMG00000000414	ythdf3	51	89.931	Mastacembelus_armatus
ENSSLDG00000005029	ythdf3	99	96.512	ENSMZEG00005021836	ythdf3	99	96.512	Maylandia_zebra
ENSSLDG00000005029	ythdf3	65	71.835	ENSMAUG00000012560	Ythdf3	99	71.654	Mesocricetus_auratus
ENSSLDG00000005029	ythdf3	66	56.140	ENSMICG00000009379	-	100	54.847	Microcebus_murinus
ENSSLDG00000005029	ythdf3	96	82.868	ENSMMOG00000003402	ythdf3	96	94.500	Mola_mola
ENSSLDG00000005029	ythdf3	100	97.015	ENSMALG00000000147	ythdf3	100	97.015	Monopterus_albus
ENSSLDG00000005029	ythdf3	100	75.772	MGP_SPRETEiJ_G0025794	Ythdf3	99	76.804	Mus_spretus
ENSSLDG00000005029	ythdf3	98	83.516	ENSNBRG00000023433	ythdf3	99	93.825	Neolamprologus_brichardi
ENSSLDG00000005029	ythdf3	51	83.566	ENSNLEG00000003872	YTHDF3	52	81.818	Nomascus_leucogenys
ENSSLDG00000005029	ythdf3	99	96.523	ENSONIG00000014175	ythdf3	99	96.523	Oreochromis_niloticus
ENSSLDG00000005029	ythdf3	99	76.988	ENSOANG00000005053	YTHDF3	100	77.778	Ornithorhynchus_anatinus
ENSSLDG00000005029	ythdf3	100	92.703	ENSORLG00000008640	ythdf3	100	91.376	Oryzias_latipes
ENSSLDG00000005029	ythdf3	100	92.537	ENSORLG00020014684	ythdf3	100	91.211	Oryzias_latipes_hni
ENSSLDG00000005029	ythdf3	100	92.703	ENSORLG00015014880	ythdf3	100	91.211	Oryzias_latipes_hsok
ENSSLDG00000005029	ythdf3	100	93.698	ENSOMEG00000008212	ythdf3	100	92.206	Oryzias_melastigma
ENSSLDG00000005029	ythdf3	97	80.000	ENSPKIG00000008298	ythdf3	99	83.216	Paramormyrops_kingsleyae
ENSSLDG00000005029	ythdf3	99	87.230	ENSPMGG00000023791	ythdf3	96	97.260	Periophthalmus_magnuspinnatus
ENSSLDG00000005029	ythdf3	100	94.196	ENSPFOG00000006082	ythdf3	100	94.196	Poecilia_formosa
ENSSLDG00000005029	ythdf3	100	94.362	ENSPLAG00000006902	ythdf3	100	94.362	Poecilia_latipinna
ENSSLDG00000005029	ythdf3	100	94.196	ENSPMEG00000012922	ythdf3	100	94.196	Poecilia_mexicana
ENSSLDG00000005029	ythdf3	100	93.874	ENSPREG00000019781	ythdf3	100	93.874	Poecilia_reticulata
ENSSLDG00000005029	ythdf3	55	93.103	ENSPPYG00000018626	YTHDF3	99	59.760	Pongo_abelii
ENSSLDG00000005029	ythdf3	84	93.085	ENSPVAG00000002740	YTHDF3	85	93.085	Pteropus_vampyrus
ENSSLDG00000005029	ythdf3	98	84.752	ENSPNYG00000002949	ythdf3	99	95.246	Pundamilia_nyererei
ENSSLDG00000005029	ythdf3	96	77.944	ENSSFOG00015015445	ythdf3	97	89.862	Scleropages_formosus
ENSSLDG00000005029	ythdf3	97	95.424	ENSSMAG00000014999	ythdf3	100	95.424	Scophthalmus_maximus
ENSSLDG00000005029	ythdf3	100	100.000	ENSSDUG00000014403	ythdf3	100	100.000	Seriola_dumerili
ENSSLDG00000005029	ythdf3	99	96.198	ENSSPAG00000001269	ythdf3	97	98.630	Stegastes_partitus
ENSSLDG00000005029	ythdf3	100	93.388	ENSTRUG00000007870	ythdf3	100	91.736	Takifugu_rubripes
ENSSLDG00000005029	ythdf3	88	87.281	ENSVPAG00000008104	YTHDF3	71	90.164	Vicugna_pacos
ENSSLDG00000005029	ythdf3	99	79.058	ENSXETG00000021659	ythdf3	99	78.634	Xenopus_tropicalis
ENSSLDG00000005029	ythdf3	99	90.210	ENSXCOG00000009687	ythdf3	100	88.060	Xiphophorus_couchianus
ENSSLDG00000005029	ythdf3	100	93.201	ENSXMAG00000009698	ythdf3	100	93.201	Xiphophorus_maculatus