EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSLDG00000005034 (Gene tree)
Gene ID: -
Gene Symbol: snrpc
Alias: U1C|chunp6909|zgc:109792
Full Name: small nuclear ribonucleoprotein polypeptide C
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 6579 bases
Position: chrPEQF01098899.1:201169-207747
Accession: 111657925
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000006285	zf-U1	PF06220.12	1.1e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000006500	-	2808	XM_023410264	ENSSLDP00000006285	148 (aa)	XP_023266032	UPI0004955814

Gene Model

Click here to download ENSSLDG00000005034's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000005034's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000005034	snrpc	100	100.000	ENSAPOG00000013907	snrpc	100	100.000	Acanthochromis_polyacanthus
ENSSLDG00000005034	snrpc	100	100.000	ENSAOCG00000021151	snrpc	100	100.000	Amphiprion_ocellaris
ENSSLDG00000005034	snrpc	100	100.000	ENSAPEG00000023221	snrpc	100	100.000	Amphiprion_percula
ENSSLDG00000005034	snrpc	100	100.000	ENSATEG00000025133	snrpc	100	100.000	Anabas_testudineus
ENSSLDG00000005034	snrpc	100	97.987	ENSACLG00000000843	snrpc	100	97.987	Astatotilapia_calliptera
ENSSLDG00000005034	snrpc	100	97.315	ENSCSEG00000016845	snrpc	100	97.315	Cynoglossus_semilaevis
ENSSLDG00000005034	snrpc	100	98.649	ENSCVAG00000014297	snrpc	100	98.649	Cyprinodon_variegatus
ENSSLDG00000005034	snrpc	74	99.083	ENSFHEG00000016667	snrpc	97	99.083	Fundulus_heteroclitus
ENSSLDG00000005034	snrpc	99	97.260	ENSGMOG00000000090	snrpc	100	97.260	Gadus_morhua
ENSSLDG00000005034	snrpc	100	98.649	ENSGAFG00000016115	snrpc	100	98.649	Gambusia_affinis
ENSSLDG00000005034	snrpc	99	99.315	ENSGACG00000004899	snrpc	98	99.315	Gasterosteus_aculeatus
ENSSLDG00000005034	snrpc	100	97.987	ENSHBUG00000011637	snrpc	100	97.987	Haplochromis_burtoni
ENSSLDG00000005034	snrpc	100	96.622	ENSHCOG00000001596	snrpc	100	96.622	Hippocampus_comes
ENSSLDG00000005034	snrpc	100	98.649	ENSKMAG00000016356	snrpc	100	98.649	Kryptolebias_marmoratus
ENSSLDG00000005034	snrpc	100	99.329	ENSLBEG00000023881	snrpc	100	99.329	Labrus_bergylta
ENSSLDG00000005034	snrpc	97	58.904	ENSMLEG00000039724	-	81	52.083	Mandrillus_leucophaeus
ENSSLDG00000005034	snrpc	100	99.324	ENSMAMG00000003857	snrpc	100	99.324	Mastacembelus_armatus
ENSSLDG00000005034	snrpc	100	97.987	ENSMZEG00005002199	snrpc	100	97.987	Maylandia_zebra
ENSSLDG00000005034	snrpc	98	98.621	ENSMMOG00000013149	snrpc	100	98.621	Mola_mola
ENSSLDG00000005034	snrpc	100	97.973	ENSMALG00000001197	snrpc	100	97.973	Monopterus_albus
ENSSLDG00000005034	snrpc	100	97.987	ENSONIG00000014757	snrpc	100	97.987	Oreochromis_niloticus
ENSSLDG00000005034	snrpc	96	97.183	ENSORLG00000007308	snrpc	97	97.183	Oryzias_latipes
ENSSLDG00000005034	snrpc	96	96.503	ENSORLG00020012607	SNRPC	97	96.503	Oryzias_latipes_hni
ENSSLDG00000005034	snrpc	75	97.297	ENSOMEG00000012014	snrpc	69	97.297	Oryzias_melastigma
ENSSLDG00000005034	snrpc	96	65.789	ENSOGAG00000028405	-	67	65.049	Otolemur_garnettii
ENSSLDG00000005034	snrpc	98	96.552	ENSPMGG00000022162	snrpc	100	96.552	Periophthalmus_magnuspinnatus
ENSSLDG00000005034	snrpc	100	98.649	ENSPFOG00000015174	snrpc	100	98.649	Poecilia_formosa
ENSSLDG00000005034	snrpc	100	98.649	ENSPLAG00000012311	snrpc	100	98.649	Poecilia_latipinna
ENSSLDG00000005034	snrpc	100	98.649	ENSPMEG00000010274	snrpc	100	98.649	Poecilia_mexicana
ENSSLDG00000005034	snrpc	99	84.247	ENSPREG00000013017	snrpc	79	84.247	Poecilia_reticulata
ENSSLDG00000005034	snrpc	100	83.019	ENSPNAG00000012799	snrpc	100	73.684	Pygocentrus_nattereri
ENSSLDG00000005034	snrpc	100	100.000	ENSSMAG00000008029	snrpc	100	100.000	Scophthalmus_maximus
ENSSLDG00000005034	snrpc	100	100.000	ENSSDUG00000018895	snrpc	81	100.000	Seriola_dumerili
ENSSLDG00000005034	snrpc	100	100.000	ENSSPAG00000000914	snrpc	100	100.000	Stegastes_partitus
ENSSLDG00000005034	snrpc	100	97.297	ENSTRUG00000021651	snrpc	100	97.297	Takifugu_rubripes
ENSSLDG00000005034	snrpc	100	88.272	ENSTNIG00000018307	snrpc	100	88.272	Tetraodon_nigroviridis
ENSSLDG00000005034	snrpc	100	98.649	ENSXMAG00000017935	snrpc	100	98.649	Xiphophorus_maculatus