EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSLDG00000005119 (Gene tree)
Gene ID
-
Gene Symbol
snrpf
Alias
snrpfl
Full Name
small nuclear ribonucleoprotein polypeptide F
Gene Type
protein_coding
Species
Seriola_lalandi_dorsalis
Status
putative
Strand
Minus strand
Length
1485 bases
Position
chrPEQF01099078.1:534533-536017
Accession
ZDB-GENE-040930-9
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSLDP00000006554LSMPF01423.227.4e-2111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSLDT00000006774-261-ENSSLDP0000000655486 (aa)--
Gene Model
Click here to download ENSSLDG00000005119's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000005119's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSLDG00000005119snrpf9272.152ENSSLDG00000003885-8975.342
ENSSLDG00000005119snrpf7137.705ENSSLDG00000004364-8137.288
ENSSLDG00000005119snrpf7246.774ENSSLDG00000004136-5346.774
ENSSLDG00000005119snrpf7750.000ENSSLDG00000020533lsm66950.000
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSLDG00000005119snrpf10096.512ENSG00000139343SNRPF10096.512Homo_sapiens
ENSSLDG00000005119snrpf98100.000ENSAPOG00000003377snrpf66100.000Acanthochromis_polyacanthus
ENSSLDG00000005119snrpf9897.619ENSAMEG00000002166-9997.619Ailuropoda_melanoleuca
ENSSLDG00000005119snrpf8882.895ENSAMEG00000018718-8784.000Ailuropoda_melanoleuca
ENSSLDG00000005119snrpf98100.000ENSACIG00000013216snrpf99100.000Amphilophus_citrinellus
ENSSLDG00000005119snrpf98100.000ENSAOCG00000015108snrpf99100.000Amphiprion_ocellaris
ENSSLDG00000005119snrpf98100.000ENSAPEG00000022022snrpf99100.000Amphiprion_percula
ENSSLDG00000005119snrpf99100.000ENSATEG00000022625snrpf91100.000Anabas_testudineus
ENSSLDG00000005119snrpf9896.429ENSACAG00000014073SNRPF9796.429Anolis_carolinensis
ENSSLDG00000005119snrpf8766.667ENSANAG00000025860-8566.667Aotus_nancymaae
ENSSLDG00000005119snrpf8686.667ENSANAG00000020297-7085.526Aotus_nancymaae
ENSSLDG00000005119snrpf10096.512ENSANAG00000032845SNRPF10096.512Aotus_nancymaae
ENSSLDG00000005119snrpf98100.000ENSACLG00000016066snrpf99100.000Astatotilapia_calliptera
ENSSLDG00000005119snrpf8796.000ENSAMXG00000007421snrpf8796.000Astyanax_mexicanus
ENSSLDG00000005119snrpf10096.512ENSBTAG00000016271SNRPF10096.512Bos_taurus
ENSSLDG00000005119snrpf9189.744ENSBTAG00000050012-9389.333Bos_taurus
ENSSLDG00000005119snrpf9071.429WBGene00004918snr-58573.611Caenorhabditis_elegans
ENSSLDG00000005119snrpf10096.512ENSCJAG00000002705-10096.512Callithrix_jacchus
ENSSLDG00000005119snrpf8391.549ENSCAFG00000031151-8591.781Canis_familiaris
ENSSLDG00000005119snrpf10096.512ENSCAFG00000006395-7796.512Canis_familiaris
ENSSLDG00000005119snrpf9185.897ENSCAFG00020013161-7494.286Canis_lupus_dingo
ENSSLDG00000005119snrpf8391.549ENSCAFG00020010823-8591.781Canis_lupus_dingo
ENSSLDG00000005119snrpf8782.667ENSTSYG00000030635-8782.667Carlito_syrichta
ENSSLDG00000005119snrpf9491.358ENSTSYG00000031636-6193.151Carlito_syrichta
ENSSLDG00000005119snrpf8790.789ENSTSYG00000036502-8790.789Carlito_syrichta
ENSSLDG00000005119snrpf9897.619ENSCAPG00000007242SNRPF9997.619Cavia_aperea
ENSSLDG00000005119snrpf10096.512ENSCPOG00000013898SNRPF10096.512Cavia_porcellus
ENSSLDG00000005119snrpf10087.209ENSCCAG00000033627-5988.000Cebus_capucinus
ENSSLDG00000005119snrpf10096.512ENSCCAG00000037378-10096.512Cebus_capucinus
ENSSLDG00000005119snrpf10095.349ENSCCAG00000017356-8796.000Cebus_capucinus
ENSSLDG00000005119snrpf10096.512ENSCLAG00000007200SNRPF10096.512Chinchilla_lanigera
ENSSLDG00000005119snrpf10096.512ENSCSAG00000003602-7096.512Chlorocebus_sabaeus
ENSSLDG00000005119snrpf7495.312ENSCHOG00000009392SNRPF10095.312Choloepus_hoffmanni
ENSSLDG00000005119snrpf10084.884ENSCPBG00000001985-8986.667Chrysemys_picta_bellii
ENSSLDG00000005119snrpf8788.000ENSCPBG00000006227-8788.000Chrysemys_picta_bellii
ENSSLDG00000005119snrpf9891.667ENSCPBG00000024287-5993.151Chrysemys_picta_bellii
ENSSLDG00000005119snrpf10086.047ENSCPBG00000026463-8786.667Chrysemys_picta_bellii
ENSSLDG00000005119snrpf9888.095ENSCSAVG00000007498-8390.411Ciona_savignyi
ENSSLDG00000005119snrpf10096.512ENSCGRG00001017100-10096.512Cricetulus_griseus_chok1gshd
ENSSLDG00000005119snrpf8789.333ENSCGRG00001008965-5889.333Cricetulus_griseus_chok1gshd
ENSSLDG00000005119snrpf10096.512ENSCGRG00000000336-10096.512Cricetulus_griseus_crigri
ENSSLDG00000005119snrpf9390.000ENSCGRG00000018878-9489.333Cricetulus_griseus_crigri
ENSSLDG00000005119snrpf10097.674ENSCSEG00000004748snrpf10097.674Cynoglossus_semilaevis
ENSSLDG00000005119snrpf9998.824ENSCVAG00000000397snrpf6798.824Cyprinodon_variegatus
ENSSLDG00000005119snrpf10096.591ENSDARG00000105037snrpf10096.591Danio_rerio
ENSSLDG00000005119snrpf8794.667ENSDNOG00000048989-6794.667Dasypus_novemcinctus
ENSSLDG00000005119snrpf8780.000ENSDNOG00000049373-6580.000Dasypus_novemcinctus
ENSSLDG00000005119snrpf10096.512ENSDNOG00000043775-5596.512Dasypus_novemcinctus
ENSSLDG00000005119snrpf6994.915ENSDORG00000029740-7294.915Dipodomys_ordii
ENSSLDG00000005119snrpf8486.111ENSDORG00000025351-10086.111Dipodomys_ordii
ENSSLDG00000005119snrpf9877.381FBgn0000426SmF8380.822Drosophila_melanogaster
ENSSLDG00000005119snrpf10096.512ENSETEG00000001558-10096.512Echinops_telfairi
ENSSLDG00000005119snrpf9476.543ENSEBUG00000001793-7286.567Eptatretus_burgeri
ENSSLDG00000005119snrpf10096.512ENSECAG00000019817SNRPF7096.512Equus_caballus
ENSSLDG00000005119snrpf9897.619ENSEEUG00000013509SNRPF9997.619Erinaceus_europaeus
ENSSLDG00000005119snrpf10093.023ENSELUG00000007737RUXF8694.667Esox_lucius
ENSSLDG00000005119snrpf10096.512ENSELUG00000003121RUXF10096.512Esox_lucius
ENSSLDG00000005119snrpf9875.000ENSFCAG00000031148-7273.077Felis_catus
ENSSLDG00000005119snrpf10096.512ENSFCAG00000029966-10096.512Felis_catus
ENSSLDG00000005119snrpf8772.000ENSFCAG00000021942-8772.000Felis_catus
ENSSLDG00000005119snrpf9897.619ENSFALG00000010799SNRPF9897.619Ficedula_albicollis
ENSSLDG00000005119snrpf10096.512ENSFDAG00000002831-10096.512Fukomys_damarensis
ENSSLDG00000005119snrpf98100.000ENSFHEG00000003240snrpf74100.000Fundulus_heteroclitus
ENSSLDG00000005119snrpf98100.000ENSGMOG00000007741snrpf99100.000Gadus_morhua
ENSSLDG00000005119snrpf10096.512ENSGALG00000011409SNRPF10096.512Gallus_gallus
ENSSLDG00000005119snrpf98100.000ENSGAFG00000016187snrpf97100.000Gambusia_affinis
ENSSLDG00000005119snrpf9898.810ENSGACG00000020055snrpf9998.810Gasterosteus_aculeatus
ENSSLDG00000005119snrpf8690.541ENSGAGG00000012945-6990.667Gopherus_agassizii
ENSSLDG00000005119snrpf8082.609ENSGAGG00000014132-8382.609Gopherus_agassizii
ENSSLDG00000005119snrpf7291.935ENSGAGG00000020974-5489.062Gopherus_agassizii
ENSSLDG00000005119snrpf9288.608ENSGAGG00000022991-8091.176Gopherus_agassizii
ENSSLDG00000005119snrpf7088.333ENSGAGG00000011163-8691.837Gopherus_agassizii
ENSSLDG00000005119snrpf9877.381ENSGGOG00000039936-8374.667Gorilla_gorilla
ENSSLDG00000005119snrpf10096.512ENSGGOG00000001127-9997.619Gorilla_gorilla
ENSSLDG00000005119snrpf9273.418ENSGGOG00000039564-9072.000Gorilla_gorilla
ENSSLDG00000005119snrpf8794.667ENSHGLG00000021172-8794.667Heterocephalus_glaber_female
ENSSLDG00000005119snrpf10096.512ENSHGLG00000009108SNRPF10096.512Heterocephalus_glaber_female
ENSSLDG00000005119snrpf8794.667ENSHGLG00100019596-8794.667Heterocephalus_glaber_male
ENSSLDG00000005119snrpf9897.619ENSHGLG00100008103-9997.619Heterocephalus_glaber_male
ENSSLDG00000005119snrpf7388.571ENSHCOG00000018663snrpf5588.571Hippocampus_comes
ENSSLDG00000005119snrpf10098.837ENSIPUG00000018994snrpf99100.000Ictalurus_punctatus
ENSSLDG00000005119snrpf10096.512ENSSTOG00000010434-10096.512Ictidomys_tridecemlineatus
ENSSLDG00000005119snrpf10077.907ENSJJAG00000004558-8978.667Jaculus_jaculus
ENSSLDG00000005119snrpf10096.512ENSJJAG00000011272-10096.512Jaculus_jaculus
ENSSLDG00000005119snrpf7891.045ENSJJAG00000004828-8692.857Jaculus_jaculus
ENSSLDG00000005119snrpf10081.395ENSJJAG00000010502-8982.667Jaculus_jaculus
ENSSLDG00000005119snrpf10098.837ENSKMAG00000013566snrpf10098.837Kryptolebias_marmoratus
ENSSLDG00000005119snrpf10097.674ENSLBEG00000008800snrpf10097.674Labrus_bergylta
ENSSLDG00000005119snrpf10095.349ENSLACG00000002456-7495.349Latimeria_chalumnae
ENSSLDG00000005119snrpf10096.512ENSLOCG00000015744snrpf10096.512Lepisosteus_oculatus
ENSSLDG00000005119snrpf9897.619ENSLAFG00000017426SNRPF9897.619Loxodonta_africana
ENSSLDG00000005119snrpf9898.810ENSMAMG00000016593snrpf9998.810Mastacembelus_armatus
ENSSLDG00000005119snrpf98100.000ENSMZEG00005014701snrpf99100.000Maylandia_zebra
ENSSLDG00000005119snrpf9897.619ENSMGAG00000011453-7697.619Meleagris_gallopavo
ENSSLDG00000005119snrpf8697.297ENSMAUG00000016909-10097.297Mesocricetus_auratus
ENSSLDG00000005119snrpf8792.000ENSMAUG00000008799-8792.000Mesocricetus_auratus
ENSSLDG00000005119snrpf8697.297ENSMAUG00000019737-10097.297Mesocricetus_auratus
ENSSLDG00000005119snrpf9971.765ENSMAUG00000010289-8871.622Mesocricetus_auratus
ENSSLDG00000005119snrpf10096.512ENSMICG00000012153-10096.512Microcebus_murinus
ENSSLDG00000005119snrpf8789.333ENSMICG00000030494-6089.333Microcebus_murinus
ENSSLDG00000005119snrpf8784.000ENSMOCG00000022166-8284.000Microtus_ochrogaster
ENSSLDG00000005119snrpf10096.512ENSMOCG00000020437Snrpf10096.512Microtus_ochrogaster
ENSSLDG00000005119snrpf7980.882ENSMOCG00000020220-8780.882Microtus_ochrogaster
ENSSLDG00000005119snrpf9997.647ENSMMOG00000007127snrpf10097.647Mola_mola
ENSSLDG00000005119snrpf10096.512ENSMODG00000008091SNRPF7596.512Monodelphis_domestica
ENSSLDG00000005119snrpf98100.000ENSMALG00000012328snrpf99100.000Monopterus_albus
ENSSLDG00000005119snrpf10096.512MGP_CAROLIEiJ_G0015735-10096.512Mus_caroli
ENSSLDG00000005119snrpf10096.512ENSMUSG00000020018Snrpf10096.512Mus_musculus
ENSSLDG00000005119snrpf10096.512MGP_PahariEiJ_G0031350Snrpf10096.512Mus_pahari
ENSSLDG00000005119snrpf10096.512MGP_SPRETEiJ_G0016553Snrpf10096.512Mus_spretus
ENSSLDG00000005119snrpf10096.512ENSMPUG00000007176-7796.512Mustela_putorius_furo
ENSSLDG00000005119snrpf10076.744ENSMLUG00000026269-6976.712Myotis_lucifugus
ENSSLDG00000005119snrpf9897.619ENSMLUG00000013577-9997.619Myotis_lucifugus
ENSSLDG00000005119snrpf10096.512ENSMLUG00000026149-8196.512Myotis_lucifugus
ENSSLDG00000005119snrpf10096.512ENSMLUG00000029201-8196.512Myotis_lucifugus
ENSSLDG00000005119snrpf10096.512ENSMLUG00000027932-8196.512Myotis_lucifugus
ENSSLDG00000005119snrpf10096.512ENSNGAG00000024292-10096.512Nannospalax_galili
ENSSLDG00000005119snrpf7390.476ENSNGAG00000005851-7190.000Nannospalax_galili
ENSSLDG00000005119snrpf9998.824ENSNBRG00000011682snrpf8798.824Neolamprologus_brichardi
ENSSLDG00000005119snrpf8668.919ENSMEUG00000000671SNRPF8768.919Notamacropus_eugenii
ENSSLDG00000005119snrpf10096.512ENSODEG00000010328-9997.619Octodon_degus
ENSSLDG00000005119snrpf10095.349ENSOCUG00000010925SNRPF7695.349Oryctolagus_cuniculus
ENSSLDG00000005119snrpf8597.260ENSORLG00020008216snrpf8697.260Oryzias_latipes_hni
ENSSLDG00000005119snrpf8597.260ENSORLG00015007418snrpf8697.260Oryzias_latipes_hsok
ENSSLDG00000005119snrpf9898.810ENSOMEG00000003018snrpf9998.810Oryzias_melastigma
ENSSLDG00000005119snrpf8794.667ENSOGAG00000030323-8794.667Otolemur_garnettii
ENSSLDG00000005119snrpf10096.512ENSOARG00000011853-7596.512Ovis_aries
ENSSLDG00000005119snrpf9273.418ENSPPAG00000037479-9172.000Pan_paniscus
ENSSLDG00000005119snrpf9877.381ENSPPAG00000037544-8374.667Pan_paniscus
ENSSLDG00000005119snrpf10096.512ENSPPRG00000005875-10096.512Panthera_pardus
ENSSLDG00000005119snrpf9873.810ENSPPRG00000007449-7773.333Panthera_pardus
ENSSLDG00000005119snrpf10096.512ENSPTIG00000007520SNRPF10096.512Panthera_tigris_altaica
ENSSLDG00000005119snrpf9876.190ENSPTIG00000005117-8973.333Panthera_tigris_altaica
ENSSLDG00000005119snrpf9877.381ENSPTRG00000043814-8374.667Pan_troglodytes
ENSSLDG00000005119snrpf9273.418ENSPTRG00000047717-9172.000Pan_troglodytes
ENSSLDG00000005119snrpf9998.824ENSPKIG00000014784snrpf9398.824Paramormyrops_kingsleyae
ENSSLDG00000005119snrpf9897.619ENSPSIG00000016462SNRPF9897.619Pelodiscus_sinensis
ENSSLDG00000005119snrpf9997.647ENSPMGG00000023548snrpf10097.647Periophthalmus_magnuspinnatus
ENSSLDG00000005119snrpf10096.512ENSPEMG00000023326Snrpf10096.512Peromyscus_maniculatus_bairdii
ENSSLDG00000005119snrpf98100.000ENSPLAG00000023932snrpf99100.000Poecilia_latipinna
ENSSLDG00000005119snrpf98100.000ENSPMEG00000003377snrpf99100.000Poecilia_mexicana
ENSSLDG00000005119snrpf98100.000ENSPREG00000022635snrpf97100.000Poecilia_reticulata
ENSSLDG00000005119snrpf10096.512ENSPPYG00000004847-10096.512Pongo_abelii
ENSSLDG00000005119snrpf10096.512ENSPCOG00000023833-10096.512Propithecus_coquereli
ENSSLDG00000005119snrpf10096.512ENSPVAG00000009036SNRPF10096.512Pteropus_vampyrus
ENSSLDG00000005119snrpf98100.000ENSPNYG00000021712snrpf99100.000Pundamilia_nyererei
ENSSLDG00000005119snrpf9898.810ENSPNAG00000019117snrpf9998.810Pygocentrus_nattereri
ENSSLDG00000005119snrpf10096.512ENSRNOG00000005556Snrpf10096.512Rattus_norvegicus
ENSSLDG00000005119snrpf8793.333ENSRBIG00000030414-8793.333Rhinopithecus_bieti
ENSSLDG00000005119snrpf8793.333ENSRROG00000021975-8793.333Rhinopithecus_roxellana
ENSSLDG00000005119snrpf8160.563YPR182WSMX38360.563Saccharomyces_cerevisiae
ENSSLDG00000005119snrpf8781.333ENSSBOG00000032297-8681.333Saimiri_boliviensis_boliviensis
ENSSLDG00000005119snrpf8796.000ENSSBOG00000012868-8796.000Saimiri_boliviensis_boliviensis
ENSSLDG00000005119snrpf10096.512ENSSBOG00000036179-10096.512Saimiri_boliviensis_boliviensis
ENSSLDG00000005119snrpf9176.543ENSSBOG00000027638-9176.543Saimiri_boliviensis_boliviensis
ENSSLDG00000005119snrpf9897.619ENSSHAG00000012294SNRPF7697.619Sarcophilus_harrisii
ENSSLDG00000005119snrpf73100.000ENSSFOG00015021523snrpf94100.000Scleropages_formosus
ENSSLDG00000005119snrpf10096.512ENSSMAG00000005533snrpf9996.512Scophthalmus_maximus
ENSSLDG00000005119snrpf7698.462ENSSDUG00000016283snrpf7798.462Seriola_dumerili
ENSSLDG00000005119snrpf9897.619ENSSPUG00000014590-9997.619Sphenodon_punctatus
ENSSLDG00000005119snrpf9998.824ENSSPAG00000003283snrpf9798.824Stegastes_partitus
ENSSLDG00000005119snrpf10096.512ENSSSCG00000000895SNRPF10096.512Sus_scrofa
ENSSLDG00000005119snrpf8098.551ENSTRUG00000014956snrpf10098.551Takifugu_rubripes
ENSSLDG00000005119snrpf10097.674ENSTNIG00000012672snrpf10097.674Tetraodon_nigroviridis
ENSSLDG00000005119snrpf8769.333ENSTTRG00000006070SNRPF8769.333Tursiops_truncatus
ENSSLDG00000005119snrpf10096.512ENSUAMG00000008176-10096.512Ursus_americanus
ENSSLDG00000005119snrpf10083.721ENSUAMG00000001101-8885.333Ursus_americanus
ENSSLDG00000005119snrpf10096.512ENSUMAG00000003528-10096.512Ursus_maritimus
ENSSLDG00000005119snrpf8785.333ENSUMAG00000006177-8885.333Ursus_maritimus
ENSSLDG00000005119snrpf10096.512ENSVPAG00000008712-10096.512Vicugna_pacos
ENSSLDG00000005119snrpf9188.462ENSVVUG00000023821-9688.000Vulpes_vulpes
ENSSLDG00000005119snrpf8673.684ENSXETG00000021630snrpf8771.053Xenopus_tropicalis
ENSSLDG00000005119snrpf98100.000ENSXCOG00000013860snrpf97100.000Xiphophorus_couchianus
ENSSLDG00000005119snrpf98100.000ENSXMAG00000015448snrpf99100.000Xiphophorus_maculatus

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