EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000005275 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: ras-related protein Rab-11B
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 2974 bases
Position: chrPEQF01098723.1:269043-272016
Accession: 111653758
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000006624	MMR_HSR1	PF01926.23	3.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000006844	-	899	XM_023404435	ENSSLDP00000006624	218 (aa)	XP_023260203	UPI00022B0D84

Gene Model

Click here to download ENSSLDG00000005275's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000005275's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000005275	-	72	36.943	ENSSLDG00000022282	rab41	74	36.943
ENSSLDG00000005275	-	74	32.934	ENSSLDG00000013333	si:cabz01085950.1	82	32.934
ENSSLDG00000005275	-	89	32.000	ENSSLDG00000003264	rab6ba	92	32.000
ENSSLDG00000005275	-	94	42.157	ENSSLDG00000011069	rab5aa	89	42.157
ENSSLDG00000005275	-	82	41.111	ENSSLDG00000020918	RAB17	78	41.111
ENSSLDG00000005275	-	74	31.792	ENSSLDG00000003489	rasl11a	67	31.792
ENSSLDG00000005275	-	74	45.679	ENSSLDG00000006977	rab18a	79	45.679
ENSSLDG00000005275	-	79	47.399	ENSSLDG00000015823	-	87	47.399
ENSSLDG00000005275	-	80	44.253	ENSSLDG00000003631	si:dkey-16l2.16	98	40.670
ENSSLDG00000005275	-	96	44.550	ENSSLDG00000018024	zgc:171927	99	44.550
ENSSLDG00000005275	-	73	32.500	ENSSLDG00000018681	rheb	86	32.500
ENSSLDG00000005275	-	76	43.373	ENSSLDG00000023317	rab15	78	43.373
ENSSLDG00000005275	-	53	30.252	ENSSLDG00000017889	arl4cb	60	30.252
ENSSLDG00000005275	-	94	63.592	ENSSLDG00000009725	-	93	63.592
ENSSLDG00000005275	-	72	39.752	ENSSLDG00000000773	rab9a	79	39.752
ENSSLDG00000005275	-	54	30.579	ENSSLDG00000005628	arl4d	59	30.579
ENSSLDG00000005275	-	72	39.877	ENSSLDG00000024959	-	78	39.877
ENSSLDG00000005275	-	99	82.949	ENSSLDG00000012116	rab11al	99	82.949
ENSSLDG00000005275	-	96	45.933	ENSSLDG00000012251	rab1ba	99	45.933
ENSSLDG00000005275	-	100	63.761	ENSSLDG00000012091	rab25b	100	63.761
ENSSLDG00000005275	-	77	52.096	ENSSLDG00000005718	-	78	52.096
ENSSLDG00000005275	-	78	39.306	ENSSLDG00000019214	zgc:101559	74	39.306
ENSSLDG00000005275	-	100	96.330	ENSSLDG00000005221	rab11ba	100	96.330
ENSSLDG00000005275	-	72	35.669	ENSSLDG00000012474	rab6bb	75	35.669
ENSSLDG00000005275	-	80	46.023	ENSSLDG00000009068	-	83	46.023
ENSSLDG00000005275	-	96	45.283	ENSSLDG00000018942	rab1ab	99	45.283
ENSSLDG00000005275	-	95	30.631	ENSSLDG00000002646	si:dkey-34d22.5	97	30.631
ENSSLDG00000005275	-	94	34.928	ENSSLDG00000004352	-	92	34.928
ENSSLDG00000005275	-	100	86.239	ENSSLDG00000009438	rab11a	100	86.239
ENSSLDG00000005275	-	100	97.706	ENSSLDG00000020676	rab11bb	100	97.706
ENSSLDG00000005275	-	79	33.721	ENSSLDG00000000287	rab23	79	34.969
ENSSLDG00000005275	-	79	40.678	ENSSLDG00000009351	rab9b	86	40.678
ENSSLDG00000005275	-	66	42.667	ENSSLDG00000008070	-	62	42.667
ENSSLDG00000005275	-	70	34.839	ENSSLDG00000022168	kras	87	35.928
ENSSLDG00000005275	-	74	47.826	ENSSLDG00000017771	rab5c	73	47.826
ENSSLDG00000005275	-	68	35.333	ENSSLDG00000012627	hrasb	85	36.420
ENSSLDG00000005275	-	72	36.943	ENSSLDG00000015289	-	75	36.943
ENSSLDG00000005275	-	85	33.333	ENSSLDG00000009573	rab34a	76	33.155
ENSSLDG00000005275	-	78	45.614	ENSSLDG00000006014	rab18b	83	45.614
ENSSLDG00000005275	-	82	38.043	ENSSLDG00000022004	rab33a	65	38.043
ENSSLDG00000005275	-	96	39.048	ENSSLDG00000022533	rab30	97	39.048
ENSSLDG00000005275	-	74	30.061	ENSSLDG00000025169	rhebl1	88	30.061
ENSSLDG00000005275	-	94	41.546	ENSSLDG00000006360	RAB39B	96	41.546
ENSSLDG00000005275	-	77	52.695	ENSSLDG00000010503	rab14	78	52.695
ENSSLDG00000005275	-	94	33.816	ENSSLDG00000008584	rab33ba	87	33.816
ENSSLDG00000005275	-	72	39.877	ENSSLDG00000012391	RAB7A	78	39.877
ENSSLDG00000005275	-	74	33.537	ENSSLDG00000021833	si:ch73-116o1.2	82	35.227
ENSSLDG00000005275	-	99	63.927	ENSSLDG00000010880	rab25a	99	63.927
ENSSLDG00000005275	-	76	42.771	ENSSLDG00000021984	RAB15	78	42.771
ENSSLDG00000005275	-	53	39.316	ENSSLDG00000014812	rab34b	57	39.316
ENSSLDG00000005275	-	83	41.530	ENSSLDG00000020354	rab42a	84	41.530
ENSSLDG00000005275	-	74	42.857	ENSSLDG00000020438	rab22a	83	42.857
ENSSLDG00000005275	-	78	54.386	ENSSLDG00000022555	rab2a	81	54.386
ENSSLDG00000005275	-	71	34.161	ENSSLDG00000011597	si:dkey-13a21.4	77	34.161
ENSSLDG00000005275	-	75	42.424	ENSSLDG00000022239	rab12	84	37.736
ENSSLDG00000005275	-	76	51.807	ENSSLDG00000011757	-	84	51.807

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000005275	-	100	97.706	ENSAPOG00000023455	rab11bb	100	97.706	Acanthochromis_polyacanthus
ENSSLDG00000005275	-	100	85.780	ENSACIG00000019631	rab11bb	100	85.780	Amphilophus_citrinellus
ENSSLDG00000005275	-	100	100.000	ENSACIG00000024376	-	100	100.000	Amphilophus_citrinellus
ENSSLDG00000005275	-	100	100.000	ENSAOCG00000018849	-	100	100.000	Amphiprion_ocellaris
ENSSLDG00000005275	-	100	97.706	ENSAOCG00000018239	rab11bb	100	97.706	Amphiprion_ocellaris
ENSSLDG00000005275	-	100	97.706	ENSAPEG00000016590	rab11bb	100	97.706	Amphiprion_percula
ENSSLDG00000005275	-	100	99.541	ENSATEG00000023725	-	100	99.541	Anabas_testudineus
ENSSLDG00000005275	-	100	97.706	ENSATEG00000017696	rab11bb	100	97.706	Anabas_testudineus
ENSSLDG00000005275	-	94	98.544	ENSAPLG00000011046	-	94	98.544	Anas_platyrhynchos
ENSSLDG00000005275	-	100	100.000	ENSACLG00000005446	-	100	100.000	Astatotilapia_calliptera
ENSSLDG00000005275	-	100	97.706	ENSACLG00000007076	rab11bb	100	97.706	Astatotilapia_calliptera
ENSSLDG00000005275	-	100	99.083	ENSAMXG00000042655	rab11bb	100	99.083	Astyanax_mexicanus
ENSSLDG00000005275	-	100	96.789	ENSAMXG00000037623	-	100	96.789	Astyanax_mexicanus
ENSSLDG00000005275	-	100	96.789	ENSBTAG00000002475	RAB11B	100	96.789	Bos_taurus
ENSSLDG00000005275	-	96	95.215	ENSCHIG00000022426	-	93	95.215	Capra_hircus
ENSSLDG00000005275	-	100	96.789	ENSCATG00000029188	-	100	96.789	Cercocebus_atys
ENSSLDG00000005275	-	100	97.706	ENSCPBG00000017056	-	100	97.706	Chrysemys_picta_bellii
ENSSLDG00000005275	-	100	99.541	ENSCSEG00000007239	-	100	99.541	Cynoglossus_semilaevis
ENSSLDG00000005275	-	100	97.706	ENSCSEG00000012149	rab11bb	100	97.706	Cynoglossus_semilaevis
ENSSLDG00000005275	-	100	95.872	ENSCVAG00000019751	-	100	95.872	Cyprinodon_variegatus
ENSSLDG00000005275	-	100	97.706	ENSCVAG00000017021	-	100	97.706	Cyprinodon_variegatus
ENSSLDG00000005275	-	100	99.083	ENSCVAG00000019718	-	100	99.083	Cyprinodon_variegatus
ENSSLDG00000005275	-	100	97.706	ENSDARG00000090086	rab11bb	100	97.706	Danio_rerio
ENSSLDG00000005275	-	99	94.470	ENSETEG00000000905	-	99	94.470	Echinops_telfairi
ENSSLDG00000005275	-	99	94.419	ENSEASG00005003708	-	99	94.419	Equus_asinus_asinus
ENSSLDG00000005275	-	99	94.419	ENSECAG00000000716	RAB11B	99	94.419	Equus_caballus
ENSSLDG00000005275	-	100	98.624	ENSELUG00000020948	-	98	100.000	Esox_lucius
ENSSLDG00000005275	-	100	97.706	ENSELUG00000021148	rab11bb	100	97.706	Esox_lucius
ENSSLDG00000005275	-	100	97.706	ENSELUG00000000916	-	100	97.706	Esox_lucius
ENSSLDG00000005275	-	100	97.706	ENSFALG00000011828	-	100	97.706	Ficedula_albicollis
ENSSLDG00000005275	-	100	99.541	ENSFHEG00000022676	-	100	99.541	Fundulus_heteroclitus
ENSSLDG00000005275	-	100	97.706	ENSFHEG00000018353	rab11bb	100	97.706	Fundulus_heteroclitus
ENSSLDG00000005275	-	100	97.706	ENSGMOG00000009211	rab11bb	100	97.706	Gadus_morhua
ENSSLDG00000005275	-	99	95.370	ENSGMOG00000009668	-	99	95.370	Gadus_morhua
ENSSLDG00000005275	-	100	97.706	ENSGALG00000000613	RAB11B	100	97.706	Gallus_gallus
ENSSLDG00000005275	-	100	97.706	ENSGAFG00000007102	rab11bb	100	97.706	Gambusia_affinis
ENSSLDG00000005275	-	100	95.413	ENSGACG00000013297	-	99	95.413	Gasterosteus_aculeatus
ENSSLDG00000005275	-	100	97.248	ENSGACG00000015479	rab11bb	100	97.248	Gasterosteus_aculeatus
ENSSLDG00000005275	-	100	96.789	ENSGGOG00000014516	RAB11B	100	96.789	Gorilla_gorilla
ENSSLDG00000005275	-	100	100.000	ENSHBUG00000009947	-	100	100.000	Haplochromis_burtoni
ENSSLDG00000005275	-	100	97.706	ENSHBUG00000014777	rab11bb	100	97.706	Haplochromis_burtoni
ENSSLDG00000005275	-	100	96.789	ENSHCOG00000000954	-	100	96.789	Hippocampus_comes
ENSSLDG00000005275	-	100	98.165	ENSHCOG00000002423	rab11bb	100	98.165	Hippocampus_comes
ENSSLDG00000005275	-	100	93.578	ENSHCOG00000000985	-	100	93.578	Hippocampus_comes
ENSSLDG00000005275	-	100	98.624	ENSIPUG00000019927	rab11bb	100	98.624	Ictalurus_punctatus
ENSSLDG00000005275	-	100	96.789	ENSIPUG00000025100	rab11b	100	96.789	Ictalurus_punctatus
ENSSLDG00000005275	-	100	97.706	ENSKMAG00000009033	rab11bb	100	97.706	Kryptolebias_marmoratus
ENSSLDG00000005275	-	100	100.000	ENSKMAG00000006170	-	100	100.000	Kryptolebias_marmoratus
ENSSLDG00000005275	-	100	91.743	ENSLBEG00000005981	-	100	91.743	Labrus_bergylta
ENSSLDG00000005275	-	100	99.083	ENSLBEG00000004172	-	100	99.083	Labrus_bergylta
ENSSLDG00000005275	-	100	97.706	ENSLBEG00000015248	rab11bb	100	97.706	Labrus_bergylta
ENSSLDG00000005275	-	100	97.706	ENSLACG00000016857	-	100	97.706	Latimeria_chalumnae
ENSSLDG00000005275	-	100	96.789	ENSMFAG00000003654	RAB11B	100	96.789	Macaca_fascicularis
ENSSLDG00000005275	-	100	96.789	ENSMLEG00000030601	-	100	96.789	Mandrillus_leucophaeus
ENSSLDG00000005275	-	100	97.248	ENSMAMG00000006378	rab11bb	100	97.248	Mastacembelus_armatus
ENSSLDG00000005275	-	100	98.624	ENSMAMG00000018533	-	100	98.624	Mastacembelus_armatus
ENSSLDG00000005275	-	100	100.000	ENSMZEG00005010975	-	100	100.000	Maylandia_zebra
ENSSLDG00000005275	-	100	97.706	ENSMZEG00005003352	rab11bb	100	97.706	Maylandia_zebra
ENSSLDG00000005275	-	100	96.789	ENSMICG00000034065	-	100	96.789	Microcebus_murinus
ENSSLDG00000005275	-	99	95.853	ENSMMOG00000001238	-	99	95.853	Mola_mola
ENSSLDG00000005275	-	94	97.561	ENSMMOG00000007917	rab11bb	100	97.561	Mola_mola
ENSSLDG00000005275	-	100	100.000	ENSMMOG00000001250	-	100	100.000	Mola_mola
ENSSLDG00000005275	-	100	97.706	ENSMODG00000003841	-	100	97.706	Monodelphis_domestica
ENSSLDG00000005275	-	100	97.706	ENSMALG00000022187	rab11bb	100	97.706	Monopterus_albus
ENSSLDG00000005275	-	94	88.889	ENSMLUG00000006677	-	100	88.889	Myotis_lucifugus
ENSSLDG00000005275	-	100	100.000	ENSNBRG00000023885	-	100	100.000	Neolamprologus_brichardi
ENSSLDG00000005275	-	100	97.706	ENSNBRG00000000372	rab11bb	100	97.706	Neolamprologus_brichardi
ENSSLDG00000005275	-	100	97.706	ENSMEUG00000003686	-	100	97.706	Notamacropus_eugenii
ENSSLDG00000005275	-	100	97.706	ENSONIG00000010435	rab11bb	100	97.706	Oreochromis_niloticus
ENSSLDG00000005275	-	100	100.000	ENSONIG00000002544	-	100	100.000	Oreochromis_niloticus
ENSSLDG00000005275	-	52	94.737	ENSOANG00000031567	-	82	94.737	Ornithorhynchus_anatinus
ENSSLDG00000005275	-	99	98.157	ENSORLG00000015284	-	72	98.157	Oryzias_latipes
ENSSLDG00000005275	-	100	97.248	ENSORLG00000013938	rab11bb	100	97.248	Oryzias_latipes
ENSSLDG00000005275	-	99	98.157	ENSORLG00020020844	RAB11B	99	98.157	Oryzias_latipes_hni
ENSSLDG00000005275	-	100	97.248	ENSORLG00020019393	rab11bb	100	97.248	Oryzias_latipes_hni
ENSSLDG00000005275	-	99	98.157	ENSORLG00015016999	RAB11B	99	98.157	Oryzias_latipes_hsok
ENSSLDG00000005275	-	100	97.248	ENSORLG00015020173	rab11bb	100	97.248	Oryzias_latipes_hsok
ENSSLDG00000005275	-	100	97.706	ENSOMEG00000017806	-	100	97.706	Oryzias_melastigma
ENSSLDG00000005275	-	100	99.083	ENSOMEG00000002562	-	100	99.083	Oryzias_melastigma
ENSSLDG00000005275	-	100	96.789	ENSPPAG00000028589	-	100	96.789	Pan_paniscus
ENSSLDG00000005275	-	100	96.789	ENSPTRG00000010422	RAB11B	100	96.789	Pan_troglodytes
ENSSLDG00000005275	-	100	96.789	ENSPANG00000007765	-	100	96.789	Papio_anubis
ENSSLDG00000005275	-	100	97.706	ENSPKIG00000011640	rab11bb	100	97.706	Paramormyrops_kingsleyae
ENSSLDG00000005275	-	100	97.248	ENSPKIG00000011703	-	100	97.248	Paramormyrops_kingsleyae
ENSSLDG00000005275	-	98	97.196	ENSPKIG00000001389	-	69	97.196	Paramormyrops_kingsleyae
ENSSLDG00000005275	-	98	93.607	ENSPSIG00000010242	-	85	93.607	Pelodiscus_sinensis
ENSSLDG00000005275	-	99	94.470	ENSPMGG00000014336	-	99	94.470	Periophthalmus_magnuspinnatus
ENSSLDG00000005275	-	100	98.165	ENSPMGG00000014333	-	100	98.165	Periophthalmus_magnuspinnatus
ENSSLDG00000005275	-	100	97.706	ENSPMGG00000009435	rab11bb	100	97.706	Periophthalmus_magnuspinnatus
ENSSLDG00000005275	-	97	97.170	ENSPCIG00000020371	-	99	97.170	Phascolarctos_cinereus
ENSSLDG00000005275	-	100	97.706	ENSPFOG00000024114	-	100	97.706	Poecilia_formosa
ENSSLDG00000005275	-	100	100.000	ENSPFOG00000006224	-	100	100.000	Poecilia_formosa
ENSSLDG00000005275	-	100	97.706	ENSPLAG00000001598	rab11bb	100	97.706	Poecilia_latipinna
ENSSLDG00000005275	-	100	100.000	ENSPLAG00000014207	-	100	100.000	Poecilia_latipinna
ENSSLDG00000005275	-	100	97.706	ENSPMEG00000012389	rab11bb	100	97.706	Poecilia_mexicana
ENSSLDG00000005275	-	100	100.000	ENSPMEG00000007842	-	100	100.000	Poecilia_mexicana
ENSSLDG00000005275	-	100	97.706	ENSPREG00000014269	rab11bb	100	97.706	Poecilia_reticulata
ENSSLDG00000005275	-	100	99.541	ENSPREG00000006336	-	100	99.541	Poecilia_reticulata
ENSSLDG00000005275	-	100	97.706	ENSPNYG00000004098	rab11bb	100	97.706	Pundamilia_nyererei
ENSSLDG00000005275	-	100	100.000	ENSPNYG00000019611	-	100	100.000	Pundamilia_nyererei
ENSSLDG00000005275	-	100	96.789	ENSRROG00000037812	-	100	96.789	Rhinopithecus_roxellana
ENSSLDG00000005275	-	97	96.698	ENSSHAG00000006816	-	97	96.698	Sarcophilus_harrisii
ENSSLDG00000005275	-	100	97.248	ENSSFOG00015009042	rab11bb	100	97.248	Scleropages_formosus
ENSSLDG00000005275	-	100	73.853	ENSSFOG00015006245	-	100	73.853	Scleropages_formosus
ENSSLDG00000005275	-	100	97.248	ENSSMAG00000004922	rab11bb	100	97.248	Scophthalmus_maximus
ENSSLDG00000005275	-	100	96.330	ENSSMAG00000018613	-	100	96.330	Scophthalmus_maximus
ENSSLDG00000005275	-	100	97.706	ENSSDUG00000013558	rab11bb	100	97.706	Seriola_dumerili
ENSSLDG00000005275	-	100	100.000	ENSSDUG00000002934	-	100	100.000	Seriola_dumerili
ENSSLDG00000005275	-	100	97.706	ENSSPUG00000002243	-	100	97.706	Sphenodon_punctatus
ENSSLDG00000005275	-	100	97.706	ENSSPAG00000011419	rab11bb	100	97.706	Stegastes_partitus
ENSSLDG00000005275	-	100	100.000	ENSSPAG00000014559	-	100	100.000	Stegastes_partitus
ENSSLDG00000005275	-	100	97.706	ENSTGUG00000000084	-	100	97.706	Taeniopygia_guttata
ENSSLDG00000005275	-	100	97.706	ENSTRUG00000022029	rab11bb	100	97.706	Takifugu_rubripes
ENSSLDG00000005275	-	99	99.537	ENSTRUG00000021619	-	100	99.537	Takifugu_rubripes
ENSSLDG00000005275	-	99	95.853	ENSTRUG00000021614	-	99	95.853	Takifugu_rubripes
ENSSLDG00000005275	-	99	99.537	ENSTNIG00000013182	-	100	99.537	Tetraodon_nigroviridis
ENSSLDG00000005275	-	99	95.392	ENSTNIG00000013184	-	99	95.392	Tetraodon_nigroviridis
ENSSLDG00000005275	-	100	96.789	ENSTNIG00000011081	rab11bb	100	96.789	Tetraodon_nigroviridis
ENSSLDG00000005275	-	93	97.044	ENSTNIG00000002003	-	100	97.044	Tetraodon_nigroviridis
ENSSLDG00000005275	-	94	97.561	ENSUAMG00000006639	-	99	97.561	Ursus_americanus
ENSSLDG00000005275	-	100	96.804	ENSXETG00000025484	rab11b.1	99	96.804	Xenopus_tropicalis
ENSSLDG00000005275	-	100	100.000	ENSXCOG00000009190	-	100	100.000	Xiphophorus_couchianus
ENSSLDG00000005275	-	100	97.706	ENSXCOG00000008042	-	100	97.706	Xiphophorus_couchianus
ENSSLDG00000005275	-	100	97.706	ENSXMAG00000011926	rab11bb	100	97.706	Xiphophorus_maculatus
ENSSLDG00000005275	-	100	99.541	ENSXMAG00000024840	-	100	99.541	Xiphophorus_maculatus