EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000005386 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: THO complex subunit 4-like
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 3175 bases
Position: chrPEQF01098997.1:12533-15707
Accession: 111660396
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000006761	RRM_1	PF00076.22	5e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000006984	-	1483	XM_023413662	ENSSLDP00000006761	262 (aa)	XP_023269430	UPI000C6F6402

Gene Model

Click here to download ENSSLDG00000005386's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000005386's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000005386	-	100	51.971	ENSSLDG00000017803	alyref	100	50.534

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000005386	-	100	53.957	ENSG00000183684	ALYREF	97	53.091	Homo_sapiens
ENSSLDG00000005386	-	100	55.197	ENSAPOG00000018455	ALYREF	100	53.737	Acanthochromis_polyacanthus
ENSSLDG00000005386	-	76	61.000	ENSAMEG00000017463	ALYREF	74	59.500	Ailuropoda_melanoleuca
ENSSLDG00000005386	-	76	60.302	ENSACAG00000010526	ALYREF	99	50.554	Anolis_carolinensis
ENSSLDG00000005386	-	76	58.291	ENSANAG00000022638	-	77	58.883	Aotus_nancymaae
ENSSLDG00000005386	-	100	49.064	ENSANAG00000028229	-	78	47.566	Aotus_nancymaae
ENSSLDG00000005386	-	100	53.957	ENSBTAG00000008498	ALYREF	100	53.091	Bos_taurus
ENSSLDG00000005386	-	100	53.597	ENSCJAG00000039942	ALYREF	97	53.091	Callithrix_jacchus
ENSSLDG00000005386	-	100	53.957	ENSCAFG00000005877	ALYREF	100	53.091	Canis_familiaris
ENSSLDG00000005386	-	100	53.957	ENSCAFG00020009815	ALYREF	100	53.091	Canis_lupus_dingo
ENSSLDG00000005386	-	100	53.147	ENSCHIG00000017396	ALYREF	100	52.297	Capra_hircus
ENSSLDG00000005386	-	82	55.556	ENSTSYG00000002272	ALYREF	71	57.895	Carlito_syrichta
ENSSLDG00000005386	-	55	62.500	ENSCAPG00000014727	-	100	59.028	Cavia_aperea
ENSSLDG00000005386	-	100	54.135	ENSCPOG00000013710	ALYREF	100	52.000	Cavia_porcellus
ENSSLDG00000005386	-	100	49.242	ENSCCAG00000030237	-	100	48.669	Cebus_capucinus
ENSSLDG00000005386	-	100	51.557	ENSCCAG00000020578	-	97	53.091	Cebus_capucinus
ENSSLDG00000005386	-	100	53.957	ENSCATG00000033169	ALYREF	97	53.091	Cercocebus_atys
ENSSLDG00000005386	-	100	54.717	ENSCLAG00000015026	ALYREF	100	54.580	Chinchilla_lanigera
ENSSLDG00000005386	-	100	53.957	ENSCSAG00000002216	ALYREF	97	53.091	Chlorocebus_sabaeus
ENSSLDG00000005386	-	92	50.833	ENSCANG00000034056	ALYREF	88	58.115	Colobus_angolensis_palliatus
ENSSLDG00000005386	-	100	54.753	ENSCGRG00001018191	-	100	52.555	Cricetulus_griseus_chok1gshd
ENSSLDG00000005386	-	79	58.252	ENSCGRG00000015871	-	90	57.073	Cricetulus_griseus_crigri
ENSSLDG00000005386	-	65	77.515	ENSCSEG00000015438	-	92	77.515	Cynoglossus_semilaevis
ENSSLDG00000005386	-	75	57.653	ENSDNOG00000002563	ALYREF	75	61.735	Dasypus_novemcinctus
ENSSLDG00000005386	-	75	60.914	ENSDORG00000025849	-	73	61.421	Dipodomys_ordii
ENSSLDG00000005386	-	75	58.163	ENSETEG00000016596	ALYREF	100	58.673	Echinops_telfairi
ENSSLDG00000005386	-	100	53.957	ENSEASG00005005824	ALYREF	95	53.091	Equus_asinus_asinus
ENSSLDG00000005386	-	100	53.957	ENSECAG00000018754	ALYREF	95	53.091	Equus_caballus
ENSSLDG00000005386	-	64	56.983	ENSEEUG00000010164	ALYREF	100	56.983	Erinaceus_europaeus
ENSSLDG00000005386	-	100	53.957	ENSFCAG00000022549	ALYREF	98	53.091	Felis_catus
ENSSLDG00000005386	-	91	49.580	ENSFDAG00000001213	ALYREF	81	59.896	Fukomys_damarensis
ENSSLDG00000005386	-	100	53.237	ENSGALG00000007237	ALYREF	100	51.282	Gallus_gallus
ENSSLDG00000005386	-	100	55.235	ENSGACG00000013328	ALYREF	100	51.429	Gasterosteus_aculeatus
ENSSLDG00000005386	-	100	53.818	ENSGAGG00000008536	ALYREF	100	53.091	Gopherus_agassizii
ENSSLDG00000005386	-	100	53.957	ENSGGOG00000013935	ALYREF	99	52.727	Gorilla_gorilla
ENSSLDG00000005386	-	100	54.380	ENSHGLG00000008293	ALYREF	100	54.015	Heterocephalus_glaber_female
ENSSLDG00000005386	-	76	59.296	ENSHGLG00100006949	ALYREF	77	59.296	Heterocephalus_glaber_male
ENSSLDG00000005386	-	100	56.631	ENSHCOG00000015046	ALYREF	100	53.763	Hippocampus_comes
ENSSLDG00000005386	-	100	52.330	ENSJJAG00000004134	-	100	51.636	Jaculus_jaculus
ENSSLDG00000005386	-	100	54.182	ENSLACG00000005694	ALYREF	100	54.212	Latimeria_chalumnae
ENSSLDG00000005386	-	78	60.784	ENSLAFG00000003083	ALYREF	97	59.204	Loxodonta_africana
ENSSLDG00000005386	-	100	55.597	ENSMFAG00000001394	ALYREF	97	54.478	Macaca_fascicularis
ENSSLDG00000005386	-	100	53.957	ENSMMUG00000012884	ALYREF	97	53.091	Macaca_mulatta
ENSSLDG00000005386	-	100	53.957	ENSMNEG00000043666	ALYREF	97	53.091	Macaca_nemestrina
ENSSLDG00000005386	-	73	56.021	ENSMLEG00000043353	ALYREF	80	58.115	Mandrillus_leucophaeus
ENSSLDG00000005386	-	100	53.612	ENSMAUG00000020552	-	100	52.672	Mesocricetus_auratus
ENSSLDG00000005386	-	100	53.986	ENSMICG00000017403	ALYREF	97	52.364	Microcebus_murinus
ENSSLDG00000005386	-	100	53.817	ENSMOCG00000016792	-	100	51.908	Microtus_ochrogaster
ENSSLDG00000005386	-	98	53.285	ENSMODG00000003030	ALYREF	83	51.661	Monodelphis_domestica
ENSSLDG00000005386	-	100	54.064	ENSMALG00000019408	ALYREF	100	53.763	Monopterus_albus
ENSSLDG00000005386	-	100	54.745	MGP_CAROLIEiJ_G0017529	Alyref	100	53.285	Mus_caroli
ENSSLDG00000005386	-	98	50.775	MGP_CAROLIEiJ_G0014874	Alyref2	100	50.382	Mus_caroli
ENSSLDG00000005386	-	100	44.966	ENSMUSG00000097550	Gm21304	100	44.128	Mus_musculus
ENSSLDG00000005386	-	100	47.727	ENSMUSG00000086727	4931428L18Rik	100	45.802	Mus_musculus
ENSSLDG00000005386	-	100	44.371	ENSMUSG00000090854	Gm4340	99	43.509	Mus_musculus
ENSSLDG00000005386	-	100	44.966	ENSMUSG00000094144	Gm21312	100	44.128	Mus_musculus
ENSSLDG00000005386	-	76	53.535	ENSMUSG00000091101	Gm4302	61	52.020	Mus_musculus
ENSSLDG00000005386	-	76	53.535	ENSMUSG00000112856	Gm4305	62	52.020	Mus_musculus
ENSSLDG00000005386	-	100	44.966	ENSMUSG00000091779	Gm21293	100	44.128	Mus_musculus
ENSSLDG00000005386	-	100	44.966	ENSMUSG00000095022	Gm20765	100	44.128	Mus_musculus
ENSSLDG00000005386	-	76	52.525	ENSMUSG00000096640	Gm4312	62	51.515	Mus_musculus
ENSSLDG00000005386	-	100	54.745	ENSMUSG00000025134	Alyref	100	53.285	Mus_musculus
ENSSLDG00000005386	-	100	44.966	ENSMUSG00000097878	Gm8764	98	52.174	Mus_musculus
ENSSLDG00000005386	-	100	47.909	ENSMUSG00000117091	AC153137.1	100	45.802	Mus_musculus
ENSSLDG00000005386	-	98	51.562	ENSMUSG00000060244	Alyref2	100	51.527	Mus_musculus
ENSSLDG00000005386	-	76	53.535	ENSMUSG00000096744	Gm4307	62	52.020	Mus_musculus
ENSSLDG00000005386	-	100	44.966	ENSMUSG00000097427	Gm6763	98	52.174	Mus_musculus
ENSSLDG00000005386	-	76	52.525	ENSMUSG00000094314	Gm4301	62	51.515	Mus_musculus
ENSSLDG00000005386	-	76	53.535	ENSMUSG00000112931	Gm4303	62	52.020	Mus_musculus
ENSSLDG00000005386	-	76	50.505	MGP_PahariEiJ_G0027254	-	82	50.000	Mus_pahari
ENSSLDG00000005386	-	76	50.505	MGP_PahariEiJ_G0027255	-	80	50.000	Mus_pahari
ENSSLDG00000005386	-	70	56.923	MGP_PahariEiJ_G0018656	-	98	57.513	Mus_pahari
ENSSLDG00000005386	-	100	54.745	MGP_PahariEiJ_G0018655	-	100	53.285	Mus_pahari
ENSSLDG00000005386	-	100	54.745	MGP_SPRETEiJ_G0018373	Alyref	100	53.285	Mus_spretus
ENSSLDG00000005386	-	50	57.576	MGP_SPRETEiJ_G0016590	-	55	57.576	Mus_spretus
ENSSLDG00000005386	-	98	51.938	MGP_SPRETEiJ_G0015679	Alyref2	100	51.908	Mus_spretus
ENSSLDG00000005386	-	97	44.922	ENSMLUG00000024471	-	82	43.191	Myotis_lucifugus
ENSSLDG00000005386	-	97	47.566	ENSMLUG00000002626	-	98	46.642	Myotis_lucifugus
ENSSLDG00000005386	-	97	45.736	ENSMLUG00000015043	-	98	43.359	Myotis_lucifugus
ENSSLDG00000005386	-	97	49.412	ENSMLUG00000027516	-	78	47.451	Myotis_lucifugus
ENSSLDG00000005386	-	97	46.591	ENSMLUG00000026271	-	61	50.259	Myotis_lucifugus
ENSSLDG00000005386	-	97	47.656	ENSMLUG00000024976	-	61	49.485	Myotis_lucifugus
ENSSLDG00000005386	-	97	44.531	ENSMLUG00000022869	-	64	47.423	Myotis_lucifugus
ENSSLDG00000005386	-	100	44.891	ENSMLUG00000023213	-	77	46.890	Myotis_lucifugus
ENSSLDG00000005386	-	73	45.312	ENSMLUG00000028343	-	85	45.833	Myotis_lucifugus
ENSSLDG00000005386	-	97	45.489	ENSMLUG00000024447	-	60	48.454	Myotis_lucifugus
ENSSLDG00000005386	-	97	47.451	ENSMLUG00000025677	-	77	44.314	Myotis_lucifugus
ENSSLDG00000005386	-	97	46.275	ENSMLUG00000030407	-	77	42.045	Myotis_lucifugus
ENSSLDG00000005386	-	75	58.673	ENSMLUG00000009555	-	66	58.163	Myotis_lucifugus
ENSSLDG00000005386	-	97	43.922	ENSMLUG00000027352	-	77	43.529	Myotis_lucifugus
ENSSLDG00000005386	-	100	53.957	ENSNLEG00000010313	ALYREF	97	53.091	Nomascus_leucogenys
ENSSLDG00000005386	-	55	63.194	ENSMEUG00000002210	ALYREF	59	61.806	Notamacropus_eugenii
ENSSLDG00000005386	-	55	63.194	ENSOPRG00000005551	-	52	59.722	Ochotona_princeps
ENSSLDG00000005386	-	100	53.381	ENSODEG00000008359	ALYREF	100	52.518	Octodon_degus
ENSSLDG00000005386	-	100	49.338	ENSORLG00000012331	ALYREF	100	53.169	Oryzias_latipes
ENSSLDG00000005386	-	93	53.498	ENSOGAG00000012409	ALYREF	76	59.091	Otolemur_garnettii
ENSSLDG00000005386	-	75	60.714	ENSOARG00000017932	ALYREF	67	60.714	Ovis_aries
ENSSLDG00000005386	-	100	53.957	ENSPPRG00000010829	ALYREF	98	53.091	Panthera_pardus
ENSSLDG00000005386	-	51	64.662	ENSPTIG00000006399	ALYREF	70	66.917	Panthera_tigris_altaica
ENSSLDG00000005386	-	100	53.957	ENSPTRG00000009774	ALYREF	97	53.091	Pan_troglodytes
ENSSLDG00000005386	-	100	53.957	ENSPANG00000019265	ALYREF	97	53.091	Papio_anubis
ENSSLDG00000005386	-	53	62.143	ENSPSIG00000017541	ALYREF	97	61.151	Pelodiscus_sinensis
ENSSLDG00000005386	-	100	53.957	ENSPPYG00000008749	ALYREF	97	53.091	Pongo_abelii
ENSSLDG00000005386	-	100	53.986	ENSPCOG00000020874	ALYREF	97	52.364	Propithecus_coquereli
ENSSLDG00000005386	-	100	49.635	ENSPVAG00000017866	ALYREF	69	59.184	Pteropus_vampyrus
ENSSLDG00000005386	-	64	56.906	ENSRNOG00000036687	Alyref	91	56.667	Rattus_norvegicus
ENSSLDG00000005386	-	74	59.585	ENSRBIG00000039651	ALYREF	72	59.585	Rhinopithecus_bieti
ENSSLDG00000005386	-	77	59.701	ENSRROG00000045364	ALYREF	75	58.794	Rhinopithecus_roxellana
ENSSLDG00000005386	-	75	60.406	ENSSHAG00000010459	ALYREF	93	60.406	Sarcophilus_harrisii
ENSSLDG00000005386	-	100	97.736	ENSSDUG00000003992	-	100	97.736	Seriola_dumerili
ENSSLDG00000005386	-	100	53.261	ENSSPUG00000004600	ALYREF	100	52.899	Sphenodon_punctatus
ENSSLDG00000005386	-	98	53.480	ENSSPAG00000011178	ALYREF	96	51.079	Stegastes_partitus
ENSSLDG00000005386	-	100	54.015	ENSSSCG00000032655	ALYREF	100	54.015	Sus_scrofa
ENSSLDG00000005386	-	53	62.143	ENSTGUG00000003513	ALYREF	98	57.857	Taeniopygia_guttata
ENSSLDG00000005386	-	100	51.546	ENSTRUG00000008828	ALYREF	100	53.430	Takifugu_rubripes
ENSSLDG00000005386	-	75	60.714	ENSTBEG00000005834	ALYREF	100	60.714	Tupaia_belangeri
ENSSLDG00000005386	-	100	53.237	ENSTTRG00000012275	ALYREF	100	52.364	Tursiops_truncatus
ENSSLDG00000005386	-	100	55.894	ENSXETG00000005391	alyref	100	54.753	Xenopus_tropicalis