EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000005670 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 3983 bases
Position: chrPEQF01099450.1:427337-431319
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000007141	zf-C2H2	PF00096.26	2.8e-48	1	8
ENSSLDP00000007141	zf-C2H2	PF00096.26	2.8e-48	2	8
ENSSLDP00000007141	zf-C2H2	PF00096.26	2.8e-48	3	8
ENSSLDP00000007141	zf-C2H2	PF00096.26	2.8e-48	4	8
ENSSLDP00000007141	zf-C2H2	PF00096.26	2.8e-48	5	8
ENSSLDP00000007141	zf-C2H2	PF00096.26	2.8e-48	6	8
ENSSLDP00000007141	zf-C2H2	PF00096.26	2.8e-48	7	8
ENSSLDP00000007141	zf-C2H2	PF00096.26	2.8e-48	8	8
ENSSLDP00000007141	zf-met	PF12874.7	1.1e-14	1	3
ENSSLDP00000007141	zf-met	PF12874.7	1.1e-14	2	3
ENSSLDP00000007141	zf-met	PF12874.7	1.1e-14	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000007366	-	1524	-	ENSSLDP00000007141	507 (aa)	-	-

Gene Model

Click here to download ENSSLDG00000005670's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000005670's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000005670	-	94	45.695	ENSSLDG00000020990	-	56	45.695
ENSSLDG00000005670	-	92	34.694	ENSSLDG00000024295	ZNF319	94	34.694
ENSSLDG00000005670	-	85	43.000	ENSSLDG00000007568	-	91	43.000
ENSSLDG00000005670	-	93	30.303	ENSSLDG00000012415	si:dkey-89b17.4	93	30.303
ENSSLDG00000005670	-	91	42.308	ENSSLDG00000004756	-	90	42.308
ENSSLDG00000005670	-	94	31.563	ENSSLDG00000011849	-	67	31.563
ENSSLDG00000005670	-	92	35.510	ENSSLDG00000018273	-	92	35.510
ENSSLDG00000005670	-	95	37.054	ENSSLDG00000023661	-	86	37.054
ENSSLDG00000005670	-	90	36.397	ENSSLDG00000020432	-	96	36.397
ENSSLDG00000005670	-	91	40.000	ENSSLDG00000017614	-	95	40.000
ENSSLDG00000005670	-	92	35.945	ENSSLDG00000014166	znf319b	81	35.945
ENSSLDG00000005670	-	92	43.046	ENSSLDG00000006217	-	95	43.046
ENSSLDG00000005670	-	89	39.683	ENSSLDG00000013760	-	95	39.683
ENSSLDG00000005670	-	76	35.922	ENSSLDG00000025359	-	61	35.032
ENSSLDG00000005670	-	91	31.834	ENSSLDG00000017718	zbtb48	56	32.680
ENSSLDG00000005670	-	90	36.735	ENSSLDG00000014177	zbtb47b	70	36.735
ENSSLDG00000005670	-	90	44.231	ENSSLDG00000000432	-	96	44.231
ENSSLDG00000005670	-	94	38.326	ENSSLDG00000007756	-	96	36.782
ENSSLDG00000005670	-	91	41.441	ENSSLDG00000010390	-	84	41.441
ENSSLDG00000005670	-	89	35.922	ENSSLDG00000015116	-	72	35.922
ENSSLDG00000005670	-	75	46.988	ENSSLDG00000009582	-	96	46.988
ENSSLDG00000005670	-	91	40.404	ENSSLDG00000023060	-	87	40.404
ENSSLDG00000005670	-	90	40.909	ENSSLDG00000000352	-	68	40.909
ENSSLDG00000005670	-	94	36.810	ENSSLDG00000025265	znf526	63	31.504
ENSSLDG00000005670	-	90	39.198	ENSSLDG00000008645	-	89	39.198
ENSSLDG00000005670	-	89	35.540	ENSSLDG00000020455	-	82	35.540
ENSSLDG00000005670	-	90	31.214	ENSSLDG00000000464	-	55	33.140
ENSSLDG00000005670	-	83	37.879	ENSSLDG00000017166	scrt1b	60	37.879
ENSSLDG00000005670	-	90	47.674	ENSSLDG00000001787	zbtb24	95	47.674
ENSSLDG00000005670	-	92	41.732	ENSSLDG00000005999	-	56	41.732
ENSSLDG00000005670	-	92	40.254	ENSSLDG00000012133	-	92	39.823
ENSSLDG00000005670	-	95	33.493	ENSSLDG00000016301	-	94	32.584
ENSSLDG00000005670	-	91	37.634	ENSSLDG00000018493	-	82	38.247
ENSSLDG00000005670	-	74	41.818	ENSSLDG00000015049	-	93	41.818
ENSSLDG00000005670	-	92	42.143	ENSSLDG00000002756	-	83	42.143
ENSSLDG00000005670	-	92	40.860	ENSSLDG00000006994	-	93	31.447
ENSSLDG00000005670	-	93	38.247	ENSSLDG00000007524	-	72	40.404
ENSSLDG00000005670	-	89	37.864	ENSSLDG00000018598	-	86	37.864
ENSSLDG00000005670	-	92	41.026	ENSSLDG00000018033	-	60	41.026
ENSSLDG00000005670	-	70	43.210	ENSSLDG00000000202	-	80	43.210
ENSSLDG00000005670	-	92	43.564	ENSSLDG00000000203	-	92	43.478
ENSSLDG00000005670	-	83	35.606	ENSSLDG00000016454	-	51	35.606
ENSSLDG00000005670	-	93	37.363	ENSSLDG00000006724	-	92	39.884
ENSSLDG00000005670	-	90	34.875	ENSSLDG00000009821	-	80	34.875
ENSSLDG00000005670	-	90	43.810	ENSSLDG00000021278	-	66	43.810
ENSSLDG00000005670	-	95	34.667	ENSSLDG00000004485	-	66	34.667
ENSSLDG00000005670	-	84	37.671	ENSSLDG00000002515	-	87	37.671
ENSSLDG00000005670	-	92	36.424	ENSSLDG00000000859	-	93	33.441
ENSSLDG00000005670	-	92	42.222	ENSSLDG00000013823	gfi1b	51	42.222
ENSSLDG00000005670	-	90	36.207	ENSSLDG00000001850	-	57	36.207
ENSSLDG00000005670	-	92	34.764	ENSSLDG00000013170	zbtb17	90	38.182
ENSSLDG00000005670	-	83	39.669	ENSSLDG00000004005	-	73	39.669
ENSSLDG00000005670	-	93	41.379	ENSSLDG00000020675	-	93	38.532
ENSSLDG00000005670	-	89	43.651	ENSSLDG00000004098	-	96	43.651
ENSSLDG00000005670	-	89	42.308	ENSSLDG00000010190	-	77	42.308
ENSSLDG00000005670	-	93	43.636	ENSSLDG00000002776	-	71	43.636
ENSSLDG00000005670	-	92	33.846	ENSSLDG00000005839	-	74	33.846
ENSSLDG00000005670	-	90	42.045	ENSSLDG00000001860	-	89	40.113
ENSSLDG00000005670	-	89	41.558	ENSSLDG00000017937	-	97	38.710
ENSSLDG00000005670	-	93	32.797	ENSSLDG00000006288	-	92	33.185
ENSSLDG00000005670	-	89	37.968	ENSSLDG00000016317	-	86	37.968
ENSSLDG00000005670	-	95	33.784	ENSSLDG00000012852	snai2	71	33.784
ENSSLDG00000005670	-	90	40.000	ENSSLDG00000025676	-	54	40.000
ENSSLDG00000005670	-	90	43.548	ENSSLDG00000012036	-	94	43.548
ENSSLDG00000005670	-	94	42.991	ENSSLDG00000005850	-	95	43.860
ENSSLDG00000005670	-	90	39.320	ENSSLDG00000020655	-	64	39.320
ENSSLDG00000005670	-	88	34.711	ENSSLDG00000014465	-	83	34.711
ENSSLDG00000005670	-	93	33.333	ENSSLDG00000018521	znf646	89	33.333
ENSSLDG00000005670	-	93	37.241	ENSSLDG00000012821	znf236	77	37.241
ENSSLDG00000005670	-	90	41.964	ENSSLDG00000012320	-	97	41.964
ENSSLDG00000005670	-	92	32.645	ENSSLDG00000000376	-	77	32.828
ENSSLDG00000005670	-	85	42.241	ENSSLDG00000009061	-	92	33.921
ENSSLDG00000005670	-	96	42.222	ENSSLDG00000020727	-	94	40.000
ENSSLDG00000005670	-	94	36.140	ENSSLDG00000013353	prdm5	73	36.140
ENSSLDG00000005670	-	92	32.090	ENSSLDG00000000457	-	75	31.579
ENSSLDG00000005670	-	92	43.046	ENSSLDG00000005868	-	97	43.046
ENSSLDG00000005670	-	89	35.088	ENSSLDG00000014436	-	76	35.088

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000005670	-	90	83.516	ENSAPOG00000001563	-	89	77.243	Acanthochromis_polyacanthus
ENSSLDG00000005670	-	91	67.177	ENSACIG00000015411	-	87	68.271	Amphilophus_citrinellus
ENSSLDG00000005670	-	92	84.536	ENSAOCG00000013589	-	97	84.536	Amphiprion_ocellaris
ENSSLDG00000005670	-	90	90.377	ENSAOCG00000013505	-	52	89.370	Amphiprion_ocellaris
ENSSLDG00000005670	-	92	83.333	ENSAPEG00000022774	-	91	83.333	Amphiprion_percula
ENSSLDG00000005670	-	90	90.377	ENSAPEG00000022756	-	53	89.020	Amphiprion_percula
ENSSLDG00000005670	-	89	91.406	ENSATEG00000019261	-	80	90.909	Anabas_testudineus
ENSSLDG00000005670	-	90	91.701	ENSATEG00000019284	-	50	89.655	Anabas_testudineus
ENSSLDG00000005670	-	91	80.308	ENSACLG00000008606	-	91	80.308	Astatotilapia_calliptera
ENSSLDG00000005670	-	90	85.714	ENSACLG00000008624	-	83	85.714	Astatotilapia_calliptera
ENSSLDG00000005670	-	90	79.085	ENSCSEG00000008903	-	85	78.602	Cynoglossus_semilaevis
ENSSLDG00000005670	-	91	64.986	ENSCVAG00000016534	-	73	64.835	Cyprinodon_variegatus
ENSSLDG00000005670	-	90	58.036	ENSGMOG00000000494	-	97	58.457	Gadus_morhua
ENSSLDG00000005670	-	94	76.632	ENSGAFG00000002659	-	66	76.632	Gambusia_affinis
ENSSLDG00000005670	-	94	81.667	ENSGACG00000001377	-	93	83.260	Gasterosteus_aculeatus
ENSSLDG00000005670	-	89	75.258	ENSHBUG00000008502	-	84	75.258	Haplochromis_burtoni
ENSSLDG00000005670	-	92	76.582	ENSHCOG00000000511	-	94	71.084	Hippocampus_comes
ENSSLDG00000005670	-	94	73.641	ENSLBEG00000018509	-	94	73.641	Labrus_bergylta
ENSSLDG00000005670	-	91	89.254	ENSMAMG00000018137	-	64	89.126	Mastacembelus_armatus
ENSSLDG00000005670	-	89	75.258	ENSMZEG00005002583	-	95	75.258	Maylandia_zebra
ENSSLDG00000005670	-	97	59.936	ENSMMOG00000009733	-	85	70.645	Mola_mola
ENSSLDG00000005670	-	89	58.025	ENSMALG00000019991	-	96	58.025	Monopterus_albus
ENSSLDG00000005670	-	91	83.439	ENSNBRG00000008223	-	78	83.471	Neolamprologus_brichardi
ENSSLDG00000005670	-	92	83.040	ENSONIG00000017233	-	100	83.040	Oreochromis_niloticus
ENSSLDG00000005670	-	90	76.250	ENSOMEG00000016463	-	64	74.713	Oryzias_melastigma
ENSSLDG00000005670	-	90	49.211	ENSPMGG00000002384	-	99	49.211	Periophthalmus_magnuspinnatus
ENSSLDG00000005670	-	94	76.421	ENSPFOG00000006287	-	70	76.421	Poecilia_formosa
ENSSLDG00000005670	-	94	76.421	ENSPMEG00000005897	-	64	76.421	Poecilia_mexicana
ENSSLDG00000005670	-	93	72.198	ENSPREG00000021246	-	93	72.198	Poecilia_reticulata
ENSSLDG00000005670	-	91	83.077	ENSPNYG00000023088	-	84	75.258	Pundamilia_nyererei
ENSSLDG00000005670	-	92	94.872	ENSSDUG00000004892	-	96	68.000	Seriola_dumerili
ENSSLDG00000005670	-	93	82.119	ENSSPAG00000022219	-	65	82.119	Stegastes_partitus
ENSSLDG00000005670	-	91	77.704	ENSTNIG00000011188	-	98	77.704	Tetraodon_nigroviridis
ENSSLDG00000005670	-	89	75.207	ENSXCOG00000012645	-	51	75.207	Xiphophorus_couchianus
ENSSLDG00000005670	-	94	76.421	ENSXMAG00000000866	-	58	76.421	Xiphophorus_maculatus