EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000005868 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 938 bases
Position: chrPEQF01022446.1:32-969
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000007399	zf-C2H2	PF00096.26	4.7e-20	1	4
ENSSLDP00000007399	zf-C2H2	PF00096.26	4.7e-20	2	4
ENSSLDP00000007399	zf-C2H2	PF00096.26	4.7e-20	3	4
ENSSLDP00000007399	zf-C2H2	PF00096.26	4.7e-20	4	4
ENSSLDP00000007399	zf-met	PF12874.7	7.8e-10	1	2
ENSSLDP00000007399	zf-met	PF12874.7	7.8e-10	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000007633	-	588	-	ENSSLDP00000007399	196 (aa)	-	-

Gene Model

Click here to download ENSSLDG00000005868's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000005868's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000005868	-	93	41.176	ENSSLDG00000016301	-	94	41.176
ENSSLDG00000005868	-	78	47.887	ENSSLDG00000001787	zbtb24	94	47.887
ENSSLDG00000005868	-	86	48.408	ENSSLDG00000015116	-	74	41.259
ENSSLDG00000005868	-	52	45.652	ENSSLDG00000002284	-	79	50.000
ENSSLDG00000005868	-	79	44.872	ENSSLDG00000014177	zbtb47b	69	44.872
ENSSLDG00000005868	-	80	41.667	ENSSLDG00000017614	-	95	41.667
ENSSLDG00000005868	-	94	63.636	ENSSLDG00000010390	-	97	63.636
ENSSLDG00000005868	-	99	55.556	ENSSLDG00000008645	-	94	55.556
ENSSLDG00000005868	-	78	49.485	ENSSLDG00000000432	-	86	49.485
ENSSLDG00000005868	-	82	46.104	ENSSLDG00000023060	-	72	46.763
ENSSLDG00000005868	-	65	39.091	ENSSLDG00000011412	snai1a	64	37.624
ENSSLDG00000005868	-	79	51.145	ENSSLDG00000004098	-	96	51.145
ENSSLDG00000005868	-	85	40.645	ENSSLDG00000017718	zbtb48	56	40.645
ENSSLDG00000005868	-	99	63.077	ENSSLDG00000013760	-	98	58.824
ENSSLDG00000005868	-	99	58.621	ENSSLDG00000007756	-	97	59.155
ENSSLDG00000005868	-	99	56.494	ENSSLDG00000012133	-	89	56.494
ENSSLDG00000005868	-	92	48.837	ENSSLDG00000001850	-	64	48.837
ENSSLDG00000005868	-	77	33.099	ENSSLDG00000015796	-	66	33.099
ENSSLDG00000005868	-	89	48.701	ENSSLDG00000006724	-	92	49.315
ENSSLDG00000005868	-	77	33.577	ENSSLDG00000025359	-	60	33.577
ENSSLDG00000005868	-	78	49.020	ENSSLDG00000000859	-	96	39.506
ENSSLDG00000005868	-	93	35.811	ENSSLDG00000000464	-	63	35.811
ENSSLDG00000005868	-	95	36.735	ENSSLDG00000017166	scrt1b	71	36.735
ENSSLDG00000005868	-	78	57.895	ENSSLDG00000018273	-	78	57.895
ENSSLDG00000005868	-	87	36.076	ENSSLDG00000014436	-	72	38.129
ENSSLDG00000005868	-	91	46.667	ENSSLDG00000000376	-	77	46.667
ENSSLDG00000005868	-	87	38.983	ENSSLDG00000013170	zbtb17	79	39.496
ENSSLDG00000005868	-	92	46.000	ENSSLDG00000023661	-	91	46.000
ENSSLDG00000005868	-	99	65.128	ENSSLDG00000005850	-	96	65.128
ENSSLDG00000005868	-	79	52.055	ENSSLDG00000015049	-	93	52.055
ENSSLDG00000005868	-	87	43.333	ENSSLDG00000002756	-	87	43.333
ENSSLDG00000005868	-	93	48.837	ENSSLDG00000000457	-	75	46.203
ENSSLDG00000005868	-	99	61.538	ENSSLDG00000020675	-	97	57.516
ENSSLDG00000005868	-	85	36.000	ENSSLDG00000004428	PRDM15	51	36.000
ENSSLDG00000005868	-	96	37.222	ENSSLDG00000002515	-	84	37.222
ENSSLDG00000005868	-	99	63.590	ENSSLDG00000020655	-	65	63.590
ENSSLDG00000005868	-	99	52.273	ENSSLDG00000000203	-	92	50.769
ENSSLDG00000005868	-	100	46.377	ENSSLDG00000000202	-	98	46.377
ENSSLDG00000005868	-	78	47.656	ENSSLDG00000007524	-	68	46.667
ENSSLDG00000005868	-	78	57.237	ENSSLDG00000012320	-	96	57.237
ENSSLDG00000005868	-	98	57.051	ENSSLDG00000018598	-	89	57.051
ENSSLDG00000005868	-	96	45.270	ENSSLDG00000013353	prdm5	80	45.161
ENSSLDG00000005868	-	80	43.137	ENSSLDG00000024295	ZNF319	87	43.137
ENSSLDG00000005868	-	79	52.597	ENSSLDG00000009821	-	80	52.597
ENSSLDG00000005868	-	99	62.745	ENSSLDG00000017937	-	95	68.627
ENSSLDG00000005868	-	86	42.857	ENSSLDG00000018521	znf646	54	41.584
ENSSLDG00000005868	-	79	41.558	ENSSLDG00000014166	znf319b	88	41.558
ENSSLDG00000005868	-	95	34.896	ENSSLDG00000004005	-	86	34.896
ENSSLDG00000005868	-	95	39.286	ENSSLDG00000007568	-	91	39.286
ENSSLDG00000005868	-	99	100.000	ENSSLDG00000006217	-	97	100.000
ENSSLDG00000005868	-	79	47.619	ENSSLDG00000012821	znf236	54	47.619
ENSSLDG00000005868	-	78	53.896	ENSSLDG00000020432	-	85	53.896
ENSSLDG00000005868	-	94	48.454	ENSSLDG00000000352	-	74	48.454
ENSSLDG00000005868	-	94	50.336	ENSSLDG00000005839	-	76	50.336
ENSSLDG00000005868	-	99	49.359	ENSSLDG00000001860	-	86	49.359
ENSSLDG00000005868	-	88	45.695	ENSSLDG00000002776	-	69	45.695
ENSSLDG00000005868	-	98	62.338	ENSSLDG00000018493	-	82	62.338
ENSSLDG00000005868	-	95	44.371	ENSSLDG00000004485	-	62	44.371
ENSSLDG00000005868	-	78	47.200	ENSSLDG00000021278	-	59	47.200
ENSSLDG00000005868	-	91	35.484	ENSSLDG00000012852	snai2	63	35.484
ENSSLDG00000005868	-	89	40.764	ENSSLDG00000009061	-	90	41.071
ENSSLDG00000005868	-	79	71.053	ENSSLDG00000010190	-	79	71.053
ENSSLDG00000005868	-	78	50.000	ENSSLDG00000006994	-	83	49.635
ENSSLDG00000005868	-	84	56.311	ENSSLDG00000012036	-	91	56.311
ENSSLDG00000005868	-	78	54.237	ENSSLDG00000020455	-	87	54.237
ENSSLDG00000005868	-	97	43.046	ENSSLDG00000005670	-	92	43.046
ENSSLDG00000005868	-	83	52.830	ENSSLDG00000020727	-	95	52.830
ENSSLDG00000005868	-	80	48.701	ENSSLDG00000006288	-	93	48.701
ENSSLDG00000005868	-	100	48.438	ENSSLDG00000018033	-	68	43.878
ENSSLDG00000005868	-	79	43.925	ENSSLDG00000013823	gfi1b	52	43.925
ENSSLDG00000005868	-	98	65.979	ENSSLDG00000016317	-	89	65.979
ENSSLDG00000005868	-	78	64.815	ENSSLDG00000009582	-	94	64.815
ENSSLDG00000005868	-	84	75.229	ENSSLDG00000004756	-	98	69.417

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000005868	-	78	53.595	ENSATEG00000003344	-	71	53.595	Anabas_testudineus
ENSSLDG00000005868	-	98	57.143	ENSACLG00000011642	-	95	57.143	Astatotilapia_calliptera
ENSSLDG00000005868	-	87	47.712	ENSACLG00000019270	-	81	47.712	Astatotilapia_calliptera
ENSSLDG00000005868	-	84	49.351	ENSCING00000003072	-	99	49.351	Ciona_intestinalis
ENSSLDG00000005868	-	79	46.405	ENSCING00000020618	-	91	46.405	Ciona_intestinalis
ENSSLDG00000005868	-	79	44.715	ENSCING00000000609	-	98	42.424	Ciona_intestinalis
ENSSLDG00000005868	-	84	50.980	ENSDNOG00000045100	-	80	50.980	Dasypus_novemcinctus
ENSSLDG00000005868	-	78	43.382	ENSEBUG00000015155	-	72	43.382	Eptatretus_burgeri
ENSSLDG00000005868	-	79	52.672	ENSEBUG00000015661	-	73	52.672	Eptatretus_burgeri
ENSSLDG00000005868	-	79	53.676	ENSIPUG00000005581	-	76	53.676	Ictalurus_punctatus
ENSSLDG00000005868	-	78	52.597	ENSIPUG00000007934	-	93	52.597	Ictalurus_punctatus
ENSSLDG00000005868	-	79	55.844	MGP_CAROLIEiJ_G0015655	-	79	55.844	Mus_caroli