EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSLDG00000005938 (Gene tree)
Gene ID: -
Gene Symbol: rpusd2
Alias: -
Full Name: RNA pseudouridine synthase domain containing 2
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 3072 bases
Position: chrPEQF01099419.1:1486580-1489651
Accession: 111644747
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000007473	PseudoU_synth_2	PF00849.22	9e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000007711	-	1957	XM_023393709	ENSSLDP00000007473	602 (aa)	XP_023249477	-

Gene Model

Click here to download ENSSLDG00000005938's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000005938's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000005938	rpusd2	87	52.564	ENSG00000166133	RPUSD2	80	56.394	Homo_sapiens
ENSSLDG00000005938	rpusd2	100	72.020	ENSAPOG00000000817	rpusd2	100	72.020	Acanthochromis_polyacanthus
ENSSLDG00000005938	rpusd2	84	53.755	ENSAMEG00000016996	RPUSD2	80	55.324	Ailuropoda_melanoleuca
ENSSLDG00000005938	rpusd2	90	75.963	ENSACIG00000024029	rpusd2	100	75.963	Amphilophus_citrinellus
ENSSLDG00000005938	rpusd2	100	72.488	ENSAOCG00000015237	rpusd2	100	72.578	Amphiprion_ocellaris
ENSSLDG00000005938	rpusd2	100	72.231	ENSAPEG00000021763	rpusd2	100	71.829	Amphiprion_percula
ENSSLDG00000005938	rpusd2	100	74.220	ENSATEG00000015242	rpusd2	100	74.220	Anabas_testudineus
ENSSLDG00000005938	rpusd2	77	57.602	ENSAPLG00000004723	RPUSD2	100	57.419	Anas_platyrhynchos
ENSSLDG00000005938	rpusd2	80	57.620	ENSACAG00000013893	RPUSD2	91	57.054	Anolis_carolinensis
ENSSLDG00000005938	rpusd2	91	52.834	ENSANAG00000009691	RPUSD2	80	56.458	Aotus_nancymaae
ENSSLDG00000005938	rpusd2	100	71.689	ENSACLG00000019531	rpusd2	100	71.689	Astatotilapia_calliptera
ENSSLDG00000005938	rpusd2	86	64.474	ENSAMXG00000013376	rpusd2	87	64.906	Astyanax_mexicanus
ENSSLDG00000005938	rpusd2	86	54.545	ENSBTAG00000003193	RPUSD2	79	56.458	Bos_taurus
ENSSLDG00000005938	rpusd2	82	55.242	ENSCJAG00000020841	RPUSD2	80	55.833	Callithrix_jacchus
ENSSLDG00000005938	rpusd2	84	53.557	ENSCAFG00000009165	RPUSD2	79	55.115	Canis_familiaris
ENSSLDG00000005938	rpusd2	84	53.557	ENSCAFG00020005849	RPUSD2	79	55.115	Canis_lupus_dingo
ENSSLDG00000005938	rpusd2	86	53.876	ENSCHIG00000006152	RPUSD2	79	56.042	Capra_hircus
ENSSLDG00000005938	rpusd2	89	54.494	ENSTSYG00000012844	RPUSD2	87	53.745	Carlito_syrichta
ENSSLDG00000005938	rpusd2	86	54.440	ENSCPOG00000013201	RPUSD2	80	56.695	Cavia_porcellus
ENSSLDG00000005938	rpusd2	82	55.444	ENSCCAG00000024378	RPUSD2	80	56.042	Cebus_capucinus
ENSSLDG00000005938	rpusd2	88	51.521	ENSCATG00000043734	RPUSD2	80	56.067	Cercocebus_atys
ENSSLDG00000005938	rpusd2	90	52.670	ENSCLAG00000011862	RPUSD2	80	56.485	Chinchilla_lanigera
ENSSLDG00000005938	rpusd2	82	55.870	ENSCSAG00000007538	RPUSD2	85	56.067	Chlorocebus_sabaeus
ENSSLDG00000005938	rpusd2	64	52.865	ENSCHOG00000004834	RPUSD2	63	53.646	Choloepus_hoffmanni
ENSSLDG00000005938	rpusd2	90	54.281	ENSCPBG00000013419	RPUSD2	88	58.385	Chrysemys_picta_bellii
ENSSLDG00000005938	rpusd2	82	55.466	ENSCANG00000003659	RPUSD2	80	56.067	Colobus_angolensis_palliatus
ENSSLDG00000005938	rpusd2	84	55.268	ENSCGRG00001009839	Rpusd2	76	56.250	Cricetulus_griseus_chok1gshd
ENSSLDG00000005938	rpusd2	84	55.268	ENSCGRG00000012348	Rpusd2	78	56.250	Cricetulus_griseus_crigri
ENSSLDG00000005938	rpusd2	100	66.446	ENSCSEG00000001953	rpusd2	99	66.446	Cynoglossus_semilaevis
ENSSLDG00000005938	rpusd2	99	70.333	ENSCVAG00000010848	rpusd2	99	70.333	Cyprinodon_variegatus
ENSSLDG00000005938	rpusd2	86	64.740	ENSDARG00000060992	rpusd2	82	65.949	Danio_rerio
ENSSLDG00000005938	rpusd2	88	53.296	ENSDNOG00000047745	RPUSD2	81	55.833	Dasypus_novemcinctus
ENSSLDG00000005938	rpusd2	79	55.882	ENSDORG00000009092	Rpusd2	99	55.882	Dipodomys_ordii
ENSSLDG00000005938	rpusd2	79	45.833	FBgn0051719	RluA-1	63	45.833	Drosophila_melanogaster
ENSSLDG00000005938	rpusd2	79	43.697	FBgn0032256	RluA-2	80	43.368	Drosophila_melanogaster
ENSSLDG00000005938	rpusd2	88	54.699	ENSETEG00000008581	RPUSD2	91	54.064	Echinops_telfairi
ENSSLDG00000005938	rpusd2	76	33.262	ENSEBUG00000012149	rpusd2	83	33.262	Eptatretus_burgeri
ENSSLDG00000005938	rpusd2	89	52.897	ENSEASG00005016463	RPUSD2	78	55.925	Equus_asinus_asinus
ENSSLDG00000005938	rpusd2	89	52.897	ENSECAG00000024178	RPUSD2	78	55.925	Equus_caballus
ENSSLDG00000005938	rpusd2	89	45.966	ENSEEUG00000005132	RPUSD2	83	48.340	Erinaceus_europaeus
ENSSLDG00000005938	rpusd2	88	65.977	ENSELUG00000016786	rpusd2	91	65.530	Esox_lucius
ENSSLDG00000005938	rpusd2	90	50.446	ENSFCAG00000040796	RPUSD2	93	50.449	Felis_catus
ENSSLDG00000005938	rpusd2	78	58.439	ENSFALG00000001122	RPUSD2	97	58.678	Ficedula_albicollis
ENSSLDG00000005938	rpusd2	90	51.934	ENSFDAG00000003070	RPUSD2	85	56.067	Fukomys_damarensis
ENSSLDG00000005938	rpusd2	100	67.715	ENSFHEG00000007518	rpusd2	99	67.715	Fundulus_heteroclitus
ENSSLDG00000005938	rpusd2	85	69.826	ENSGMOG00000011014	rpusd2	99	70.155	Gadus_morhua
ENSSLDG00000005938	rpusd2	84	57.396	ENSGALG00000041216	RPUSD2	94	58.799	Gallus_gallus
ENSSLDG00000005938	rpusd2	100	65.124	ENSGAFG00000003390	rpusd2	97	65.124	Gambusia_affinis
ENSSLDG00000005938	rpusd2	90	76.753	ENSGACG00000008656	rpusd2	99	76.753	Gasterosteus_aculeatus
ENSSLDG00000005938	rpusd2	89	56.354	ENSGAGG00000013098	RPUSD2	85	59.044	Gopherus_agassizii
ENSSLDG00000005938	rpusd2	82	55.061	ENSGGOG00000006684	RPUSD2	80	55.765	Gorilla_gorilla
ENSSLDG00000005938	rpusd2	100	71.993	ENSHBUG00000023777	rpusd2	100	71.993	Haplochromis_burtoni
ENSSLDG00000005938	rpusd2	90	51.381	ENSHGLG00000012765	RPUSD2	80	55.021	Heterocephalus_glaber_female
ENSSLDG00000005938	rpusd2	90	51.381	ENSHGLG00100006653	RPUSD2	80	55.021	Heterocephalus_glaber_male
ENSSLDG00000005938	rpusd2	89	71.536	ENSHCOG00000015587	rpusd2	86	71.536	Hippocampus_comes
ENSSLDG00000005938	rpusd2	85	67.578	ENSIPUG00000021006	rpusd2	82	67.383	Ictalurus_punctatus
ENSSLDG00000005938	rpusd2	89	53.558	ENSSTOG00000025619	RPUSD2	79	56.785	Ictidomys_tridecemlineatus
ENSSLDG00000005938	rpusd2	80	57.173	ENSJJAG00000023160	Rpusd2	94	52.930	Jaculus_jaculus
ENSSLDG00000005938	rpusd2	100	66.832	ENSKMAG00000006618	rpusd2	98	67.107	Kryptolebias_marmoratus
ENSSLDG00000005938	rpusd2	100	72.139	ENSLBEG00000021571	rpusd2	99	72.139	Labrus_bergylta
ENSSLDG00000005938	rpusd2	79	57.438	ENSLACG00000017338	RPUSD2	99	57.438	Latimeria_chalumnae
ENSSLDG00000005938	rpusd2	88	63.296	ENSLOCG00000014755	rpusd2	99	63.670	Lepisosteus_oculatus
ENSSLDG00000005938	rpusd2	86	54.286	ENSLAFG00000015588	RPUSD2	83	56.965	Loxodonta_africana
ENSSLDG00000005938	rpusd2	88	51.521	ENSMFAG00000045062	RPUSD2	80	56.067	Macaca_fascicularis
ENSSLDG00000005938	rpusd2	88	51.521	ENSMMUG00000001483	RPUSD2	80	56.067	Macaca_mulatta
ENSSLDG00000005938	rpusd2	89	45.133	ENSMNEG00000041429	RPUSD2	80	48.649	Macaca_nemestrina
ENSSLDG00000005938	rpusd2	63	54.188	ENSMLEG00000036551	RPUSD2	80	54.188	Mandrillus_leucophaeus
ENSSLDG00000005938	rpusd2	100	72.533	ENSMAMG00000001077	rpusd2	98	72.533	Mastacembelus_armatus
ENSSLDG00000005938	rpusd2	90	76.147	ENSMZEG00005006947	rpusd2	100	76.147	Maylandia_zebra
ENSSLDG00000005938	rpusd2	81	57.732	ENSMGAG00000003058	RPUSD2	97	58.230	Meleagris_gallopavo
ENSSLDG00000005938	rpusd2	91	52.347	ENSMAUG00000020467	Rpusd2	78	56.082	Mesocricetus_auratus
ENSSLDG00000005938	rpusd2	88	52.390	ENSMICG00000028637	RPUSD2	92	51.476	Microcebus_murinus
ENSSLDG00000005938	rpusd2	87	54.598	ENSMOCG00000020061	Rpusd2	79	56.667	Microtus_ochrogaster
ENSSLDG00000005938	rpusd2	100	73.920	ENSMMOG00000012020	rpusd2	99	73.920	Mola_mola
ENSSLDG00000005938	rpusd2	83	54.635	ENSMODG00000000300	RPUSD2	80	55.925	Monodelphis_domestica
ENSSLDG00000005938	rpusd2	100	73.727	ENSMALG00000010024	rpusd2	100	73.727	Monopterus_albus
ENSSLDG00000005938	rpusd2	91	52.973	MGP_CAROLIEiJ_G0024130	Rpusd2	90	52.182	Mus_caroli
ENSSLDG00000005938	rpusd2	91	52.632	ENSMUSG00000027324	Rpusd2	90	52.182	Mus_musculus
ENSSLDG00000005938	rpusd2	87	53.484	MGP_PahariEiJ_G0025573	Rpusd2	78	55.833	Mus_pahari
ENSSLDG00000005938	rpusd2	91	52.632	MGP_SPRETEiJ_G0025046	Rpusd2	79	56.458	Mus_spretus
ENSSLDG00000005938	rpusd2	89	52.720	ENSMPUG00000008517	RPUSD2	79	55.624	Mustela_putorius_furo
ENSSLDG00000005938	rpusd2	89	52.285	ENSMLUG00000007971	RPUSD2	87	56.133	Myotis_lucifugus
ENSSLDG00000005938	rpusd2	85	55.882	ENSNGAG00000014126	Rpusd2	80	57.292	Nannospalax_galili
ENSSLDG00000005938	rpusd2	100	70.199	ENSNBRG00000010070	rpusd2	100	70.199	Neolamprologus_brichardi
ENSSLDG00000005938	rpusd2	88	52.072	ENSNLEG00000035735	RPUSD2	80	56.184	Nomascus_leucogenys
ENSSLDG00000005938	rpusd2	88	53.803	ENSMEUG00000008500	RPUSD2	84	56.757	Notamacropus_eugenii
ENSSLDG00000005938	rpusd2	82	56.048	ENSOPRG00000014177	-	81	56.667	Ochotona_princeps
ENSSLDG00000005938	rpusd2	86	53.861	ENSODEG00000017193	RPUSD2	81	56.067	Octodon_degus
ENSSLDG00000005938	rpusd2	90	74.679	ENSONIG00000020102	rpusd2	100	74.679	Oreochromis_niloticus
ENSSLDG00000005938	rpusd2	93	51.207	ENSOCUG00000015745	RPUSD2	78	56.875	Oryctolagus_cuniculus
ENSSLDG00000005938	rpusd2	99	64.851	ENSORLG00000015516	rpusd2	99	63.861	Oryzias_latipes
ENSSLDG00000005938	rpusd2	99	64.628	ENSORLG00020010533	rpusd2	99	64.463	Oryzias_latipes_hni
ENSSLDG00000005938	rpusd2	99	64.132	ENSORLG00015009206	rpusd2	99	63.471	Oryzias_latipes_hsok
ENSSLDG00000005938	rpusd2	99	65.733	ENSOMEG00000007355	rpusd2	90	65.568	Oryzias_melastigma
ENSSLDG00000005938	rpusd2	90	52.260	ENSOGAG00000004867	RPUSD2	84	56.250	Otolemur_garnettii
ENSSLDG00000005938	rpusd2	80	56.875	ENSOARG00000020235	RPUSD2	87	53.084	Ovis_aries
ENSSLDG00000005938	rpusd2	87	52.564	ENSPPAG00000032874	RPUSD2	80	56.184	Pan_paniscus
ENSSLDG00000005938	rpusd2	90	51.356	ENSPPRG00000010446	RPUSD2	80	55.417	Panthera_pardus
ENSSLDG00000005938	rpusd2	90	51.356	ENSPTIG00000013316	RPUSD2	93	51.361	Panthera_tigris_altaica
ENSSLDG00000005938	rpusd2	87	52.747	ENSPTRG00000006924	RPUSD2	80	56.394	Pan_troglodytes
ENSSLDG00000005938	rpusd2	88	51.699	ENSPANG00000019339	RPUSD2	80	56.276	Papio_anubis
ENSSLDG00000005938	rpusd2	88	62.039	ENSPKIG00000023017	rpusd2	81	64.338	Paramormyrops_kingsleyae
ENSSLDG00000005938	rpusd2	64	55.039	ENSPSIG00000012680	RPUSD2	100	55.039	Pelodiscus_sinensis
ENSSLDG00000005938	rpusd2	81	79.551	ENSPMGG00000018165	rpusd2	84	84.553	Periophthalmus_magnuspinnatus
ENSSLDG00000005938	rpusd2	84	55.446	ENSPEMG00000012878	Rpusd2	82	56.432	Peromyscus_maniculatus_bairdii
ENSSLDG00000005938	rpusd2	84	62.169	ENSPCIG00000023199	RPUSD2	80	68.519	Phascolarctos_cinereus
ENSSLDG00000005938	rpusd2	100	65.025	ENSPFOG00000006829	rpusd2	98	66.556	Poecilia_formosa
ENSSLDG00000005938	rpusd2	85	73.786	ENSPLAG00000022914	rpusd2	96	73.786	Poecilia_latipinna
ENSSLDG00000005938	rpusd2	100	65.189	ENSPMEG00000009835	rpusd2	96	73.786	Poecilia_mexicana
ENSSLDG00000005938	rpusd2	100	65.353	ENSPREG00000016441	rpusd2	94	65.353	Poecilia_reticulata
ENSSLDG00000005938	rpusd2	82	55.263	ENSPPYG00000006355	RPUSD2	80	55.975	Pongo_abelii
ENSSLDG00000005938	rpusd2	90	51.699	ENSPCOG00000028019	RPUSD2	93	50.903	Propithecus_coquereli
ENSSLDG00000005938	rpusd2	95	50.514	ENSPVAG00000001837	RPUSD2	99	49.829	Pteropus_vampyrus
ENSSLDG00000005938	rpusd2	86	76.108	ENSPNYG00000021507	rpusd2	94	76.108	Pundamilia_nyererei
ENSSLDG00000005938	rpusd2	91	52.459	ENSRNOG00000046797	Rpusd2	78	56.042	Rattus_norvegicus
ENSSLDG00000005938	rpusd2	91	52.459	ENSRNOG00000010528	LOC100911166	78	56.042	Rattus_norvegicus
ENSSLDG00000005938	rpusd2	82	55.466	ENSRBIG00000030813	RPUSD2	80	56.067	Rhinopithecus_bieti
ENSSLDG00000005938	rpusd2	82	55.263	ENSRROG00000026664	RPUSD2	80	55.858	Rhinopithecus_roxellana
ENSSLDG00000005938	rpusd2	82	56.653	ENSSBOG00000035031	RPUSD2	80	57.292	Saimiri_boliviensis_boliviensis
ENSSLDG00000005938	rpusd2	64	52.284	ENSSHAG00000015108	RPUSD2	91	52.284	Sarcophilus_harrisii
ENSSLDG00000005938	rpusd2	96	56.402	ENSSFOG00015019057	rpusd2	91	56.402	Scleropages_formosus
ENSSLDG00000005938	rpusd2	100	78.218	ENSSMAG00000000903	rpusd2	100	81.101	Scophthalmus_maximus
ENSSLDG00000005938	rpusd2	100	97.010	ENSSDUG00000019139	rpusd2	100	97.010	Seriola_dumerili
ENSSLDG00000005938	rpusd2	88	54.511	ENSSARG00000002792	RPUSD2	81	57.261	Sorex_araneus
ENSSLDG00000005938	rpusd2	83	55.734	ENSSPUG00000001206	RPUSD2	89	56.057	Sphenodon_punctatus
ENSSLDG00000005938	rpusd2	100	70.132	ENSSPAG00000003578	rpusd2	100	70.132	Stegastes_partitus
ENSSLDG00000005938	rpusd2	90	51.718	ENSSSCG00000036700	RPUSD2	91	50.909	Sus_scrofa
ENSSLDG00000005938	rpusd2	86	75.769	ENSTRUG00000025880	rpusd2	95	75.915	Takifugu_rubripes
ENSSLDG00000005938	rpusd2	88	71.321	ENSTNIG00000017329	rpusd2	99	71.321	Tetraodon_nigroviridis
ENSSLDG00000005938	rpusd2	88	47.080	ENSTBEG00000007933	RPUSD2	92	47.059	Tupaia_belangeri
ENSSLDG00000005938	rpusd2	90	53.345	ENSTTRG00000010585	RPUSD2	93	53.273	Tursiops_truncatus
ENSSLDG00000005938	rpusd2	84	54.635	ENSUAMG00000001470	RPUSD2	86	56.250	Ursus_americanus
ENSSLDG00000005938	rpusd2	84	54.635	ENSUMAG00000012487	RPUSD2	70	56.250	Ursus_maritimus
ENSSLDG00000005938	rpusd2	86	53.905	ENSVPAG00000003844	RPUSD2	80	55.925	Vicugna_pacos
ENSSLDG00000005938	rpusd2	88	50.814	ENSVVUG00000026590	RPUSD2	92	50.820	Vulpes_vulpes
ENSSLDG00000005938	rpusd2	84	55.842	ENSXETG00000015973	rpusd2	95	56.757	Xenopus_tropicalis
ENSSLDG00000005938	rpusd2	100	67.164	ENSXMAG00000021821	rpusd2	99	70.772	Xiphophorus_maculatus