EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000005943 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 378 bases
Position: chrPEQF01010360.1:23-400
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000007517	Ribosomal_L22e	PF01776.17	1.2e-46	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000007755	-	378	-	ENSSLDP00000007517	125 (aa)	-	-

Gene Model

Click here to download ENSSLDG00000005943's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000005943's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000005943	-	80	64.356	ENSSLDG00000016849	-	83	63.889
ENSSLDG00000005943	-	60	50.667	ENSSLDG00000013928	-	57	55.000
ENSSLDG00000005943	-	96	55.738	ENSSLDG00000009433	rpl22l1	90	57.944
ENSSLDG00000005943	-	90	58.333	ENSSLDG00000019980	rpl22	83	61.682

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000005943	-	89	55.357	WBGene00004434	rpl-22	78	55.446	Caenorhabditis_elegans
ENSSLDG00000005943	-	67	62.791	ENSEBUG00000012931	-	99	60.000	Eptatretus_burgeri
ENSSLDG00000005943	-	89	44.144	YFL034C-A	RPL22B	87	44.340	Saccharomyces_cerevisiae
ENSSLDG00000005943	-	89	46.847	YLR061W	RPL22A	87	48.113	Saccharomyces_cerevisiae