EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000005960 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 4326 bases
Position: chrPEQF01099458.1:1031887-1036212
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000007503	PARP	PF00644.20	1.1e-28	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000007741	-	2980	-	ENSSLDP00000007503	360 (aa)	-	-

Gene Model

Click here to download ENSSLDG00000005960's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000005960's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000005960	-	58	44.498	ENSSLDG00000011620	-	70	44.498

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000005960	-	93	32.000	ENSACIG00000004252	si:ch211-219a4.3	68	32.000	Amphilophus_citrinellus
ENSSLDG00000005960	-	93	35.632	ENSACIG00000004115	si:ch211-219a4.3	69	33.621	Amphilophus_citrinellus
ENSSLDG00000005960	-	55	78.000	ENSACIG00000009912	-	63	78.000	Amphilophus_citrinellus
ENSSLDG00000005960	-	94	34.561	ENSACIG00000003944	si:ch211-219a4.3	70	34.561	Amphilophus_citrinellus
ENSSLDG00000005960	-	56	79.208	ENSACIG00000009927	-	98	79.208	Amphilophus_citrinellus
ENSSLDG00000005960	-	74	42.391	ENSACIG00000020176	-	98	42.391	Amphilophus_citrinellus
ENSSLDG00000005960	-	90	59.697	ENSAOCG00000002975	-	94	59.697	Amphiprion_ocellaris
ENSSLDG00000005960	-	51	68.306	ENSAOCG00000002980	-	59	68.306	Amphiprion_ocellaris
ENSSLDG00000005960	-	100	65.746	ENSAPEG00000003728	-	62	65.746	Amphiprion_percula
ENSSLDG00000005960	-	99	71.944	ENSATEG00000002598	-	59	71.944	Anabas_testudineus
ENSSLDG00000005960	-	95	37.673	ENSACAG00000009741	-	72	37.741	Anolis_carolinensis
ENSSLDG00000005960	-	54	77.665	ENSACLG00000013170	-	90	77.665	Astatotilapia_calliptera
ENSSLDG00000005960	-	55	80.500	ENSACLG00000013093	-	61	80.500	Astatotilapia_calliptera
ENSSLDG00000005960	-	100	70.637	ENSACLG00000013116	-	59	70.637	Astatotilapia_calliptera
ENSSLDG00000005960	-	55	47.208	ENSACLG00000005418	-	56	49.444	Astatotilapia_calliptera
ENSSLDG00000005960	-	100	70.360	ENSACLG00000013074	-	75	65.789	Astatotilapia_calliptera
ENSSLDG00000005960	-	99	34.759	ENSAMXG00000031852	-	52	34.759	Astyanax_mexicanus
ENSSLDG00000005960	-	53	55.440	ENSCSEG00000020071	-	55	55.440	Cynoglossus_semilaevis
ENSSLDG00000005960	-	65	42.979	ENSCSEG00000017936	si:ch211-219a4.3	53	46.701	Cynoglossus_semilaevis
ENSSLDG00000005960	-	59	46.698	ENSCVAG00000017520	-	87	46.698	Cyprinodon_variegatus
ENSSLDG00000005960	-	55	71.500	ENSCVAG00000014329	-	62	71.500	Cyprinodon_variegatus
ENSSLDG00000005960	-	99	37.127	ENSDARG00000040445	si:ch211-219a4.3	70	37.127	Danio_rerio
ENSSLDG00000005960	-	98	57.345	ENSDARG00000099377	si:cabz01030277.1	67	57.062	Danio_rerio
ENSSLDG00000005960	-	99	54.722	ENSDARG00000105415	si:ch211-163c2.1	70	54.722	Danio_rerio
ENSSLDG00000005960	-	86	38.730	ENSFHEG00000008557	-	57	36.977	Fundulus_heteroclitus
ENSSLDG00000005960	-	55	65.000	ENSFHEG00000008820	-	87	65.000	Fundulus_heteroclitus
ENSSLDG00000005960	-	89	36.578	ENSGMOG00000011231	-	62	43.689	Gadus_morhua
ENSSLDG00000005960	-	99	38.070	ENSGAFG00000009879	si:ch211-219a4.3	72	38.070	Gambusia_affinis
ENSSLDG00000005960	-	85	40.645	ENSGAFG00000001814	-	52	47.475	Gambusia_affinis
ENSSLDG00000005960	-	55	71.000	ENSGAFG00000002533	-	64	71.000	Gambusia_affinis
ENSSLDG00000005960	-	93	35.933	ENSHBUG00000005337	-	68	35.933	Haplochromis_burtoni
ENSSLDG00000005960	-	55	49.239	ENSHBUG00000005369	-	57	49.239	Haplochromis_burtoni
ENSSLDG00000005960	-	51	78.261	ENSKMAG00000003908	-	60	78.261	Kryptolebias_marmoratus
ENSSLDG00000005960	-	51	78.804	ENSKMAG00000012870	-	56	78.804	Kryptolebias_marmoratus
ENSSLDG00000005960	-	54	46.701	ENSLACG00000009107	-	96	46.701	Latimeria_chalumnae
ENSSLDG00000005960	-	99	35.772	ENSLACG00000001018	-	61	35.772	Latimeria_chalumnae
ENSSLDG00000005960	-	56	68.159	ENSMZEG00005026601	-	70	68.159	Maylandia_zebra
ENSSLDG00000005960	-	93	35.795	ENSMZEG00005025678	si:ch211-219a4.3	57	50.505	Maylandia_zebra
ENSSLDG00000005960	-	99	34.400	ENSMMOG00000005282	-	57	34.400	Mola_mola
ENSSLDG00000005960	-	99	32.973	ENSMMOG00000005277	-	57	32.973	Mola_mola
ENSSLDG00000005960	-	72	34.559	ENSMODG00000007157	-	83	34.559	Monodelphis_domestica
ENSSLDG00000005960	-	99	74.033	ENSMALG00000015864	-	76	74.033	Monopterus_albus
ENSSLDG00000005960	-	100	39.295	ENSMLUG00000027718	-	83	39.295	Myotis_lucifugus
ENSSLDG00000005960	-	53	78.010	ENSNBRG00000004048	-	100	78.010	Neolamprologus_brichardi
ENSSLDG00000005960	-	54	81.538	ENSNBRG00000004017	-	91	81.538	Neolamprologus_brichardi
ENSSLDG00000005960	-	55	78.000	ENSNBRG00000003877	-	68	78.000	Neolamprologus_brichardi
ENSSLDG00000005960	-	99	63.611	ENSONIG00000012986	-	50	63.611	Oreochromis_niloticus
ENSSLDG00000005960	-	92	38.872	ENSONIG00000007870	-	63	39.937	Oreochromis_niloticus
ENSSLDG00000005960	-	100	65.097	ENSORLG00000007845	-	54	65.097	Oryzias_latipes
ENSSLDG00000005960	-	99	35.519	ENSORLG00000008781	-	54	35.519	Oryzias_latipes
ENSSLDG00000005960	-	99	59.167	ENSORLG00000026291	-	57	59.167	Oryzias_latipes
ENSSLDG00000005960	-	99	58.611	ENSORLG00020005917	-	57	58.611	Oryzias_latipes_hni
ENSSLDG00000005960	-	99	36.339	ENSORLG00015021971	si:ch211-219a4.3	71	36.339	Oryzias_latipes_hsok
ENSSLDG00000005960	-	55	72.222	ENSORLG00015003387	-	58	72.222	Oryzias_latipes_hsok
ENSSLDG00000005960	-	86	38.365	ENSOMEG00000019715	si:ch211-219a4.3	66	38.365	Oryzias_melastigma
ENSSLDG00000005960	-	50	72.527	ENSOMEG00000016369	-	56	72.527	Oryzias_melastigma
ENSSLDG00000005960	-	55	71.717	ENSOMEG00000016380	-	59	71.717	Oryzias_melastigma
ENSSLDG00000005960	-	55	72.727	ENSOMEG00000016395	-	62	72.727	Oryzias_melastigma
ENSSLDG00000005960	-	92	60.725	ENSOMEG00000016408	-	99	60.725	Oryzias_melastigma
ENSSLDG00000005960	-	99	37.500	ENSPKIG00000004027	-	54	37.500	Paramormyrops_kingsleyae
ENSSLDG00000005960	-	63	47.577	ENSPKIG00000004135	-	64	47.577	Paramormyrops_kingsleyae
ENSSLDG00000005960	-	56	57.711	ENSPMGG00000017987	-	92	57.711	Periophthalmus_magnuspinnatus
ENSSLDG00000005960	-	86	40.514	ENSPMGG00000004482	-	53	48.000	Periophthalmus_magnuspinnatus
ENSSLDG00000005960	-	99	34.332	ENSPMGG00000007159	-	71	34.332	Periophthalmus_magnuspinnatus
ENSSLDG00000005960	-	100	31.250	ENSPMAG00000009649	-	53	31.169	Petromyzon_marinus
ENSSLDG00000005960	-	93	38.857	ENSPFOG00000021893	-	91	38.857	Poecilia_formosa
ENSSLDG00000005960	-	99	61.667	ENSPFOG00000024351	-	76	61.667	Poecilia_formosa
ENSSLDG00000005960	-	100	63.712	ENSPFOG00000005470	-	86	62.881	Poecilia_formosa
ENSSLDG00000005960	-	99	61.111	ENSPLAG00000004367	-	52	61.111	Poecilia_latipinna
ENSSLDG00000005960	-	51	71.585	ENSPLAG00000004362	-	66	71.585	Poecilia_latipinna
ENSSLDG00000005960	-	79	39.510	ENSPLAG00000023515	-	94	39.510	Poecilia_latipinna
ENSSLDG00000005960	-	99	61.667	ENSPMEG00000012541	-	52	61.667	Poecilia_mexicana
ENSSLDG00000005960	-	100	62.050	ENSPMEG00000012524	-	65	62.050	Poecilia_mexicana
ENSSLDG00000005960	-	79	39.860	ENSPMEG00000004356	-	94	39.860	Poecilia_mexicana
ENSSLDG00000005960	-	55	69.500	ENSPREG00000003560	-	62	69.500	Poecilia_reticulata
ENSSLDG00000005960	-	87	39.873	ENSPREG00000019242	-	62	39.873	Poecilia_reticulata
ENSSLDG00000005960	-	55	47.716	ENSPREG00000007470	-	90	46.961	Poecilia_reticulata
ENSSLDG00000005960	-	99	61.219	ENSPREG00000003531	-	52	61.219	Poecilia_reticulata
ENSSLDG00000005960	-	55	79.500	ENSPNYG00000021303	-	63	79.500	Pundamilia_nyererei
ENSSLDG00000005960	-	63	47.162	ENSPNYG00000013937	-	56	51.010	Pundamilia_nyererei
ENSSLDG00000005960	-	55	67.839	ENSPNYG00000021378	-	61	67.839	Pundamilia_nyererei
ENSSLDG00000005960	-	51	49.727	ENSPNYG00000001714	-	53	49.727	Pundamilia_nyererei
ENSSLDG00000005960	-	99	54.696	ENSPNAG00000020642	-	70	54.696	Pygocentrus_nattereri
ENSSLDG00000005960	-	99	37.396	ENSSFOG00015001605	-	78	46.930	Scleropages_formosus
ENSSLDG00000005960	-	56	53.465	ENSSFOG00015012828	-	51	53.465	Scleropages_formosus
ENSSLDG00000005960	-	81	45.017	ENSSFOG00015012771	-	53	45.017	Scleropages_formosus
ENSSLDG00000005960	-	100	61.773	ENSSMAG00000007826	-	57	61.773	Scophthalmus_maximus
ENSSLDG00000005960	-	100	95.278	ENSSDUG00000007576	-	62	95.278	Seriola_dumerili
ENSSLDG00000005960	-	99	34.759	ENSTRUG00000004579	-	57	44.670	Takifugu_rubripes
ENSSLDG00000005960	-	99	36.240	ENSTRUG00000004556	-	84	36.240	Takifugu_rubripes
ENSSLDG00000005960	-	54	48.731	ENSUAMG00000004120	-	51	48.731	Ursus_americanus
ENSSLDG00000005960	-	94	34.770	ENSXETG00000010161	parp14.3	77	43.348	Xenopus_tropicalis
ENSSLDG00000005960	-	51	38.172	ENSXETG00000031130	-	51	38.172	Xenopus_tropicalis
ENSSLDG00000005960	-	87	39.873	ENSXCOG00000014707	-	55	50.254	Xiphophorus_couchianus
ENSSLDG00000005960	-	100	64.820	ENSXMAG00000001866	-	59	64.820	Xiphophorus_maculatus
ENSSLDG00000005960	-	53	68.394	ENSXMAG00000010352	-	83	68.394	Xiphophorus_maculatus
ENSSLDG00000005960	-	100	59.557	ENSXMAG00000027110	-	52	59.557	Xiphophorus_maculatus