EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSLDG00000005971 (Gene tree)
Gene ID: -
Gene Symbol: trmt1
Alias: im:7150454
Full Name: tRNA methyltransferase 1
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 16646 bases
Position: chrPEQF01098900.1:380363-397008
Accession: 111657944
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000007561	TRM	PF02005.16	8.5e-138	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000007799	-	5114	XM_023410291	ENSSLDP00000007561	670 (aa)	XP_023266059	UPI000C6F8231

Gene Model

Click here to download ENSSLDG00000005971's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000005971's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000005971	trmt1	84	67.714	ENSG00000104907	TRMT1	100	75.000	Homo_sapiens
ENSSLDG00000005971	trmt1	84	66.434	ENSAMEG00000012598	TRMT1	85	66.608	Ailuropoda_melanoleuca
ENSSLDG00000005971	trmt1	92	80.227	ENSACIG00000018680	trmt1	97	80.227	Amphilophus_citrinellus
ENSSLDG00000005971	trmt1	100	85.672	ENSAOCG00000006781	trmt1	100	84.776	Amphiprion_ocellaris
ENSSLDG00000005971	trmt1	100	85.821	ENSAPEG00000007712	trmt1	100	84.925	Amphiprion_percula
ENSSLDG00000005971	trmt1	100	87.015	ENSATEG00000001872	trmt1	100	87.015	Anabas_testudineus
ENSSLDG00000005971	trmt1	85	67.414	ENSACAG00000003825	TRMT1	94	67.414	Anolis_carolinensis
ENSSLDG00000005971	trmt1	84	65.674	ENSANAG00000023016	TRMT1	92	65.674	Aotus_nancymaae
ENSSLDG00000005971	trmt1	92	84.740	ENSACLG00000010073	trmt1	98	85.930	Astatotilapia_calliptera
ENSSLDG00000005971	trmt1	93	76.837	ENSAMXG00000012026	trmt1	93	76.518	Astyanax_mexicanus
ENSSLDG00000005971	trmt1	86	65.874	ENSBTAG00000019325	TRMT1	83	65.874	Bos_taurus
ENSSLDG00000005971	trmt1	80	39.779	WBGene00006613	trm-1	96	39.779	Caenorhabditis_elegans
ENSSLDG00000005971	trmt1	84	64.398	ENSCJAG00000004566	TRMT1	88	64.398	Callithrix_jacchus
ENSSLDG00000005971	trmt1	84	67.308	ENSCAFG00000017070	TRMT1	90	67.308	Canis_familiaris
ENSSLDG00000005971	trmt1	84	67.368	ENSCAFG00020005397	TRMT1	88	67.368	Canis_lupus_dingo
ENSSLDG00000005971	trmt1	86	65.936	ENSCHIG00000013569	TRMT1	88	65.936	Capra_hircus
ENSSLDG00000005971	trmt1	84	64.974	ENSTSYG00000003207	TRMT1	87	64.974	Carlito_syrichta
ENSSLDG00000005971	trmt1	79	62.056	ENSCAPG00000003355	TRMT1	94	62.056	Cavia_aperea
ENSSLDG00000005971	trmt1	84	65.165	ENSCPOG00000011754	TRMT1	87	65.165	Cavia_porcellus
ENSSLDG00000005971	trmt1	84	63.923	ENSCCAG00000022263	TRMT1	92	63.923	Cebus_capucinus
ENSSLDG00000005971	trmt1	84	67.483	ENSCATG00000039850	TRMT1	86	67.483	Cercocebus_atys
ENSSLDG00000005971	trmt1	76	56.170	ENSCATG00000038220	-	92	56.170	Cercocebus_atys
ENSSLDG00000005971	trmt1	84	66.492	ENSCLAG00000015295	TRMT1	89	63.986	Chinchilla_lanigera
ENSSLDG00000005971	trmt1	70	70.526	ENSCSAG00000006500	TRMT1	89	70.526	Chlorocebus_sabaeus
ENSSLDG00000005971	trmt1	84	70.745	ENSCPBG00000023866	TRMT1	85	70.922	Chrysemys_picta_bellii
ENSSLDG00000005971	trmt1	81	48.812	ENSCING00000002884	-	97	48.812	Ciona_intestinalis
ENSSLDG00000005971	trmt1	80	50.923	ENSCSAVG00000010927	-	100	48.987	Ciona_savignyi
ENSSLDG00000005971	trmt1	85	51.807	ENSCANG00000031650	-	91	51.807	Colobus_angolensis_palliatus
ENSSLDG00000005971	trmt1	84	53.136	ENSCANG00000040631	TRMT1	86	53.136	Colobus_angolensis_palliatus
ENSSLDG00000005971	trmt1	86	65.120	ENSCGRG00001022594	Trmt1	89	65.120	Cricetulus_griseus_chok1gshd
ENSSLDG00000005971	trmt1	86	65.120	ENSCGRG00000017732	Trmt1	87	65.120	Cricetulus_griseus_crigri
ENSSLDG00000005971	trmt1	100	79.792	ENSCSEG00000001643	trmt1	100	79.495	Cynoglossus_semilaevis
ENSSLDG00000005971	trmt1	100	80.896	ENSCVAG00000011886	trmt1	100	80.896	Cyprinodon_variegatus
ENSSLDG00000005971	trmt1	97	72.549	ENSDARG00000010978	trmt1	98	72.851	Danio_rerio
ENSSLDG00000005971	trmt1	76	45.113	ENSDNOG00000048240	-	89	45.113	Dasypus_novemcinctus
ENSSLDG00000005971	trmt1	84	64.974	ENSDORG00000014298	Trmt1	86	64.974	Dipodomys_ordii
ENSSLDG00000005971	trmt1	82	45.583	FBgn0032430	CG6388	95	45.583	Drosophila_melanogaster
ENSSLDG00000005971	trmt1	85	48.090	ENSEBUG00000003449	trmt1	83	48.174	Eptatretus_burgeri
ENSSLDG00000005971	trmt1	89	64.298	ENSEASG00005004050	TRMT1	91	65.470	Equus_asinus_asinus
ENSSLDG00000005971	trmt1	89	64.463	ENSECAG00000016149	TRMT1	91	65.641	Equus_caballus
ENSSLDG00000005971	trmt1	58	56.709	ENSEEUG00000014102	-	100	56.709	Erinaceus_europaeus
ENSSLDG00000005971	trmt1	99	73.451	ENSELUG00000021659	trmt1	99	73.264	Esox_lucius
ENSSLDG00000005971	trmt1	84	66.087	ENSFCAG00000000483	TRMT1	87	66.261	Felis_catus
ENSSLDG00000005971	trmt1	87	64.915	ENSFDAG00000007386	TRMT1	89	64.915	Fukomys_damarensis
ENSSLDG00000005971	trmt1	90	80.592	ENSFHEG00000012865	trmt1	99	79.770	Fundulus_heteroclitus
ENSSLDG00000005971	trmt1	85	73.989	ENSGMOG00000006564	trmt1	99	74.692	Gadus_morhua
ENSSLDG00000005971	trmt1	100	81.045	ENSGAFG00000011862	trmt1	100	80.896	Gambusia_affinis
ENSSLDG00000005971	trmt1	86	83.737	ENSGACG00000000227	trmt1	94	84.602	Gasterosteus_aculeatus
ENSSLDG00000005971	trmt1	89	68.174	ENSGAGG00000016432	TRMT1	84	70.922	Gopherus_agassizii
ENSSLDG00000005971	trmt1	84	67.714	ENSGGOG00000014007	TRMT1	87	67.657	Gorilla_gorilla
ENSSLDG00000005971	trmt1	82	78.506	ENSHBUG00000008821	trmt1	92	78.506	Haplochromis_burtoni
ENSSLDG00000005971	trmt1	87	65.144	ENSHGLG00000015972	TRMT1	89	65.144	Heterocephalus_glaber_female
ENSSLDG00000005971	trmt1	87	61.149	ENSHGLG00100018112	TRMT1	90	61.149	Heterocephalus_glaber_male
ENSSLDG00000005971	trmt1	100	74.328	ENSHCOG00000009447	trmt1	91	81.849	Hippocampus_comes
ENSSLDG00000005971	trmt1	94	71.581	ENSIPUG00000002899	trmt1	95	72.308	Ictalurus_punctatus
ENSSLDG00000005971	trmt1	86	65.582	ENSSTOG00000012531	TRMT1	89	65.582	Ictidomys_tridecemlineatus
ENSSLDG00000005971	trmt1	84	66.492	ENSJJAG00000017154	Trmt1	88	66.492	Jaculus_jaculus
ENSSLDG00000005971	trmt1	99	82.380	ENSKMAG00000011809	trmt1	98	85.616	Kryptolebias_marmoratus
ENSSLDG00000005971	trmt1	100	83.607	ENSLBEG00000012703	trmt1	100	83.607	Labrus_bergylta
ENSSLDG00000005971	trmt1	84	62.039	ENSLACG00000014585	TRMT1	94	61.888	Latimeria_chalumnae
ENSSLDG00000005971	trmt1	85	71.278	ENSLOCG00000006479	trmt1	99	71.278	Lepisosteus_oculatus
ENSSLDG00000005971	trmt1	84	67.073	ENSLAFG00000014072	TRMT1	88	67.073	Loxodonta_africana
ENSSLDG00000005971	trmt1	84	67.483	ENSMFAG00000033143	TRMT1	86	67.483	Macaca_fascicularis
ENSSLDG00000005971	trmt1	84	63.158	ENSMMUG00000001167	TRMT1	87	63.158	Macaca_mulatta
ENSSLDG00000005971	trmt1	84	67.133	ENSMNEG00000037867	TRMT1	86	67.133	Macaca_nemestrina
ENSSLDG00000005971	trmt1	84	67.308	ENSMLEG00000016142	TRMT1	87	67.308	Mandrillus_leucophaeus
ENSSLDG00000005971	trmt1	99	87.126	ENSMAMG00000004357	trmt1	100	87.126	Mastacembelus_armatus
ENSSLDG00000005971	trmt1	100	81.642	ENSMZEG00005014510	trmt1	100	81.642	Maylandia_zebra
ENSSLDG00000005971	trmt1	84	65.445	ENSMAUG00000011134	Trmt1	87	65.445	Mesocricetus_auratus
ENSSLDG00000005971	trmt1	84	67.657	ENSMICG00000000793	TRMT1	86	67.657	Microcebus_murinus
ENSSLDG00000005971	trmt1	84	66.025	ENSMOCG00000015895	Trmt1	86	66.025	Microtus_ochrogaster
ENSSLDG00000005971	trmt1	93	83.333	ENSMMOG00000011097	trmt1	100	83.333	Mola_mola
ENSSLDG00000005971	trmt1	92	63.738	ENSMODG00000011619	TRMT1	95	65.541	Monodelphis_domestica
ENSSLDG00000005971	trmt1	83	66.843	MGP_CAROLIEiJ_G0031304	Trmt1	86	66.843	Mus_caroli
ENSSLDG00000005971	trmt1	83	67.019	ENSMUSG00000001909	Trmt1	86	67.019	Mus_musculus
ENSSLDG00000005971	trmt1	83	66.843	MGP_SPRETEiJ_G0032422	Trmt1	86	66.843	Mus_spretus
ENSSLDG00000005971	trmt1	84	67.826	ENSMPUG00000004210	TRMT1	82	67.826	Mustela_putorius_furo
ENSSLDG00000005971	trmt1	86	66.724	ENSMLUG00000012809	TRMT1	87	66.724	Myotis_lucifugus
ENSSLDG00000005971	trmt1	85	65.685	ENSNGAG00000022486	Trmt1	87	65.685	Nannospalax_galili
ENSSLDG00000005971	trmt1	75	91.176	ENSNBRG00000024376	trmt1	87	91.176	Neolamprologus_brichardi
ENSSLDG00000005971	trmt1	66	67.007	ENSNLEG00000013019	-	83	67.007	Nomascus_leucogenys
ENSSLDG00000005971	trmt1	87	65.641	ENSMEUG00000013756	TRMT1	99	65.641	Notamacropus_eugenii
ENSSLDG00000005971	trmt1	71	70.244	ENSOPRG00000009471	-	74	70.244	Ochotona_princeps
ENSSLDG00000005971	trmt1	84	66.435	ENSODEG00000010323	TRMT1	87	66.435	Octodon_degus
ENSSLDG00000005971	trmt1	100	85.821	ENSONIG00000000400	trmt1	100	85.821	Oreochromis_niloticus
ENSSLDG00000005971	trmt1	70	71.218	ENSOCUG00000021934	TRMT1	90	71.218	Oryctolagus_cuniculus
ENSSLDG00000005971	trmt1	100	76.366	ENSORLG00000020074	trmt1	100	75.628	Oryzias_latipes
ENSSLDG00000005971	trmt1	99	81.212	ENSORLG00020007561	trmt1	98	82.853	Oryzias_latipes_hni
ENSSLDG00000005971	trmt1	99	81.364	ENSORLG00015006547	trmt1	99	80.455	Oryzias_latipes_hsok
ENSSLDG00000005971	trmt1	99	80.995	ENSOMEG00000019343	trmt1	99	80.995	Oryzias_melastigma
ENSSLDG00000005971	trmt1	84	66.492	ENSOGAG00000025576	TRMT1	90	66.783	Otolemur_garnettii
ENSSLDG00000005971	trmt1	86	53.277	ENSOARG00000009397	TRMT1	82	53.613	Ovis_aries
ENSSLDG00000005971	trmt1	84	57.192	ENSPPRG00000012117	TRMT1	87	59.375	Panthera_pardus
ENSSLDG00000005971	trmt1	63	67.241	ENSPTIG00000008833	TRMT1	82	67.241	Panthera_tigris_altaica
ENSSLDG00000005971	trmt1	84	67.714	ENSPTRG00000010557	TRMT1	87	67.657	Pan_troglodytes
ENSSLDG00000005971	trmt1	82	49.561	ENSPTRG00000050421	-	89	49.561	Pan_troglodytes
ENSSLDG00000005971	trmt1	65	57.823	ENSPANG00000034058	-	78	57.823	Papio_anubis
ENSSLDG00000005971	trmt1	84	67.483	ENSPANG00000009247	TRMT1	87	67.483	Papio_anubis
ENSSLDG00000005971	trmt1	100	70.987	ENSPKIG00000005309	trmt1	100	70.839	Paramormyrops_kingsleyae
ENSSLDG00000005971	trmt1	81	60.036	ENSPSIG00000008762	TRMT1	79	60.036	Pelodiscus_sinensis
ENSSLDG00000005971	trmt1	86	83.333	ENSPMGG00000019764	trmt1	92	83.507	Periophthalmus_magnuspinnatus
ENSSLDG00000005971	trmt1	84	66.434	ENSPEMG00000016247	Trmt1	86	66.434	Peromyscus_maniculatus_bairdii
ENSSLDG00000005971	trmt1	86	62.735	ENSPMAG00000004329	trmt1	92	62.735	Petromyzon_marinus
ENSSLDG00000005971	trmt1	86	66.325	ENSPCIG00000019273	TRMT1	90	66.325	Phascolarctos_cinereus
ENSSLDG00000005971	trmt1	100	81.940	ENSPFOG00000008527	trmt1	100	81.343	Poecilia_formosa
ENSSLDG00000005971	trmt1	100	81.045	ENSPLAG00000018788	trmt1	100	81.301	Poecilia_latipinna
ENSSLDG00000005971	trmt1	100	81.493	ENSPMEG00000013120	trmt1	100	81.343	Poecilia_mexicana
ENSSLDG00000005971	trmt1	99	79.970	ENSPREG00000000211	trmt1	96	79.669	Poecilia_reticulata
ENSSLDG00000005971	trmt1	84	67.365	ENSPPYG00000009622	TRMT1	87	67.308	Pongo_abelii
ENSSLDG00000005971	trmt1	84	63.047	ENSPCAG00000003698	TRMT1	87	63.047	Procavia_capensis
ENSSLDG00000005971	trmt1	84	67.308	ENSPCOG00000008653	TRMT1	87	67.308	Propithecus_coquereli
ENSSLDG00000005971	trmt1	84	66.958	ENSPVAG00000015076	TRMT1	87	66.958	Pteropus_vampyrus
ENSSLDG00000005971	trmt1	91	83.690	ENSPNYG00000013960	trmt1	97	84.422	Pundamilia_nyererei
ENSSLDG00000005971	trmt1	94	65.571	ENSPNAG00000024859	trmt1	84	80.000	Pygocentrus_nattereri
ENSSLDG00000005971	trmt1	83	66.314	ENSRNOG00000002914	Trmt1	89	66.314	Rattus_norvegicus
ENSSLDG00000005971	trmt1	85	49.060	ENSRBIG00000037505	-	92	49.573	Rhinopithecus_bieti
ENSSLDG00000005971	trmt1	84	67.601	ENSRBIG00000038324	TRMT1	86	67.601	Rhinopithecus_bieti
ENSSLDG00000005971	trmt1	84	67.601	ENSRROG00000028599	TRMT1	86	67.601	Rhinopithecus_roxellana
ENSSLDG00000005971	trmt1	85	48.547	ENSRROG00000031847	-	91	49.060	Rhinopithecus_roxellana
ENSSLDG00000005971	trmt1	76	38.662	YDR120C	-	93	38.476	Saccharomyces_cerevisiae
ENSSLDG00000005971	trmt1	84	64.448	ENSSBOG00000028861	TRMT1	92	64.448	Saimiri_boliviensis_boliviensis
ENSSLDG00000005971	trmt1	84	69.014	ENSSHAG00000014381	TRMT1	97	67.116	Sarcophilus_harrisii
ENSSLDG00000005971	trmt1	97	71.749	ENSSFOG00015004139	trmt1	99	71.025	Scleropages_formosus
ENSSLDG00000005971	trmt1	100	82.895	ENSSMAG00000021136	trmt1	100	83.041	Scophthalmus_maximus
ENSSLDG00000005971	trmt1	100	99.104	ENSSDUG00000012740	trmt1	100	99.104	Seriola_dumerili
ENSSLDG00000005971	trmt1	76	66.990	ENSSARG00000005138	TRMT1	91	66.990	Sorex_araneus
ENSSLDG00000005971	trmt1	90	51.144	ENSSPUG00000001084	TRMT1	95	51.993	Sphenodon_punctatus
ENSSLDG00000005971	trmt1	100	84.328	ENSSPAG00000007153	trmt1	99	89.039	Stegastes_partitus
ENSSLDG00000005971	trmt1	84	66.725	ENSSSCG00000013744	TRMT1	90	66.725	Sus_scrofa
ENSSLDG00000005971	trmt1	96	74.085	ENSTRUG00000010700	trmt1	95	74.085	Takifugu_rubripes
ENSSLDG00000005971	trmt1	86	86.237	ENSTNIG00000018808	trmt1	99	86.237	Tetraodon_nigroviridis
ENSSLDG00000005971	trmt1	86	63.158	ENSTTRG00000006379	TRMT1	88	63.158	Tursiops_truncatus
ENSSLDG00000005971	trmt1	84	67.075	ENSUAMG00000022911	TRMT1	93	64.236	Ursus_americanus
ENSSLDG00000005971	trmt1	84	66.783	ENSUMAG00000006027	TRMT1	90	66.783	Ursus_maritimus
ENSSLDG00000005971	trmt1	84	67.308	ENSVVUG00000024177	TRMT1	86	67.483	Vulpes_vulpes
ENSSLDG00000005971	trmt1	68	69.348	ENSXETG00000033863	TRMT1	92	69.348	Xenopus_tropicalis
ENSSLDG00000005971	trmt1	100	81.194	ENSXCOG00000015733	trmt1	100	81.045	Xiphophorus_couchianus
ENSSLDG00000005971	trmt1	86	89.354	ENSXMAG00000013823	trmt1	99	89.529	Xiphophorus_maculatus