EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000006301 (Gene tree)
Gene ID: -
Gene Symbol: mtrex
Alias: julie|mtrex|skiv2l2|wu:fd11a05|zgc:63838
Full Name: Mtr4 exosome RNA helicase
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 25613 bases
Position: chrPEQF01098849.1:438131-463743
Accession: 111656802
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000008014	rRNA_proc-arch	PF13234.6	7.7e-88	1	1
ENSSLDP00000008048	rRNA_proc-arch	PF13234.6	3.8e-87	1	1
ENSSLDP00000008048	DEAD	PF00270.29	1.2e-16	1	1
ENSSLDP00000008014	DEAD	PF00270.29	1.3e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000008269	-	5133	XM_023408662	ENSSLDP00000008014	1037 (aa)	XP_023264430	UPI000C6FA47B
ENSSLDT00000008309	-	3009	-	ENSSLDP00000008048	1002 (aa)	-	-

Gene Model

Click here to download ENSSLDG00000006301's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000006301's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000006301	mtrex	93	35.373	ENSSLDG00000024382	skiv2l	79	35.908

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000006301	mtrex	100	83.302	ENSG00000039123	MTREX	100	83.397	Homo_sapiens
ENSSLDG00000006301	mtrex	100	95.468	ENSAPOG00000007814	mtrex	100	95.468	Acanthochromis_polyacanthus
ENSSLDG00000006301	mtrex	100	83.508	ENSAMEG00000013856	MTREX	100	83.508	Ailuropoda_melanoleuca
ENSSLDG00000006301	mtrex	100	94.611	ENSACIG00000015117	mtrex	100	94.411	Amphilophus_citrinellus
ENSSLDG00000006301	mtrex	100	95.468	ENSAOCG00000011884	mtrex	100	95.468	Amphiprion_ocellaris
ENSSLDG00000006301	mtrex	100	95.564	ENSAPEG00000019384	mtrex	100	95.564	Amphiprion_percula
ENSSLDG00000006301	mtrex	100	96.721	ENSATEG00000015117	mtrex	100	96.721	Anabas_testudineus
ENSSLDG00000006301	mtrex	95	87.265	ENSAPLG00000009694	MTREX	98	86.313	Anas_platyrhynchos
ENSSLDG00000006301	mtrex	100	84.130	ENSACAG00000015200	MTREX	96	84.130	Anolis_carolinensis
ENSSLDG00000006301	mtrex	100	83.588	ENSANAG00000023095	MTREX	100	83.683	Aotus_nancymaae
ENSSLDG00000006301	mtrex	100	95.468	ENSACLG00000001921	mtrex	100	95.468	Astatotilapia_calliptera
ENSSLDG00000006301	mtrex	95	87.348	ENSAMXG00000018751	mtrex	99	87.348	Astyanax_mexicanus
ENSSLDG00000006301	mtrex	100	83.652	ENSBTAG00000010518	MTREX	100	83.652	Bos_taurus
ENSSLDG00000006301	mtrex	99	51.748	WBGene00012342	mtr-4	97	51.745	Caenorhabditis_elegans
ENSSLDG00000006301	mtrex	95	88.008	ENSCJAG00000001773	MTREX	100	83.333	Callithrix_jacchus
ENSSLDG00000006301	mtrex	100	83.588	ENSCAFG00000006818	MTREX	100	83.333	Canis_familiaris
ENSSLDG00000006301	mtrex	100	83.588	ENSCAFG00020024352	MTREX	100	83.333	Canis_lupus_dingo
ENSSLDG00000006301	mtrex	100	83.429	ENSCHIG00000024413	MTREX	100	83.429	Capra_hircus
ENSSLDG00000006301	mtrex	93	84.919	ENSTSYG00000007389	MTREX	100	85.099	Carlito_syrichta
ENSSLDG00000006301	mtrex	87	76.712	ENSCAPG00000008696	MTREX	95	76.484	Cavia_aperea
ENSSLDG00000006301	mtrex	100	83.365	ENSCPOG00000009797	MTREX	100	83.365	Cavia_porcellus
ENSSLDG00000006301	mtrex	100	83.492	ENSCCAG00000014177	MTREX	100	83.588	Cebus_capucinus
ENSSLDG00000006301	mtrex	100	83.302	ENSCATG00000042153	MTREX	100	83.333	Cercocebus_atys
ENSSLDG00000006301	mtrex	100	83.492	ENSCLAG00000006622	MTREX	100	83.492	Chinchilla_lanigera
ENSSLDG00000006301	mtrex	100	79.543	ENSCSAG00000016445	MTREX	100	79.582	Chlorocebus_sabaeus
ENSSLDG00000006301	mtrex	69	97.222	ENSCHOG00000010936	-	70	97.222	Choloepus_hoffmanni
ENSSLDG00000006301	mtrex	100	83.958	ENSCPBG00000026551	MTREX	94	84.261	Chrysemys_picta_bellii
ENSSLDG00000006301	mtrex	95	68.607	ENSCING00000003239	-	99	65.167	Ciona_intestinalis
ENSSLDG00000006301	mtrex	96	68.083	ENSCSAVG00000009304	-	100	69.239	Ciona_savignyi
ENSSLDG00000006301	mtrex	100	83.238	ENSCANG00000035770	MTREX	100	83.238	Colobus_angolensis_palliatus
ENSSLDG00000006301	mtrex	100	83.763	ENSCGRG00001024680	Mtrex	100	83.763	Cricetulus_griseus_chok1gshd
ENSSLDG00000006301	mtrex	100	83.763	ENSCGRG00000000307	Mtrex	100	83.763	Cricetulus_griseus_crigri
ENSSLDG00000006301	mtrex	100	93.732	ENSCSEG00000018621	mtrex	98	94.118	Cynoglossus_semilaevis
ENSSLDG00000006301	mtrex	100	93.732	ENSCVAG00000004556	mtrex	100	93.732	Cyprinodon_variegatus
ENSSLDG00000006301	mtrex	100	86.789	ENSDARG00000013457	mtrex	100	86.789	Danio_rerio
ENSSLDG00000006301	mtrex	100	83.460	ENSDNOG00000015375	MTREX	100	83.460	Dasypus_novemcinctus
ENSSLDG00000006301	mtrex	100	83.588	ENSDORG00000006782	Mtrex	100	83.588	Dipodomys_ordii
ENSSLDG00000006301	mtrex	98	63.122	FBgn0001986	Mtr4	96	63.024	Drosophila_melanogaster
ENSSLDG00000006301	mtrex	90	67.671	ENSETEG00000000727	MTREX	90	67.671	Echinops_telfairi
ENSSLDG00000006301	mtrex	99	72.754	ENSEBUG00000012869	mtrex	99	72.754	Eptatretus_burgeri
ENSSLDG00000006301	mtrex	100	83.397	ENSEASG00005013270	MTREX	100	83.492	Equus_asinus_asinus
ENSSLDG00000006301	mtrex	100	83.492	ENSECAG00000023723	MTREX	100	89.767	Equus_caballus
ENSSLDG00000006301	mtrex	98	75.946	ENSEEUG00000000527	MTREX	100	75.849	Erinaceus_europaeus
ENSSLDG00000006301	mtrex	100	87.065	ENSELUG00000004898	mtrex	100	91.501	Esox_lucius
ENSSLDG00000006301	mtrex	100	83.779	ENSFCAG00000010575	MTREX	100	83.429	Felis_catus
ENSSLDG00000006301	mtrex	100	82.692	ENSFALG00000010850	MTREX	100	82.997	Ficedula_albicollis
ENSSLDG00000006301	mtrex	100	82.983	ENSFDAG00000011199	MTREX	100	82.983	Fukomys_damarensis
ENSSLDG00000006301	mtrex	100	93.635	ENSFHEG00000023014	mtrex	100	91.723	Fundulus_heteroclitus
ENSSLDG00000006301	mtrex	100	86.307	ENSGMOG00000014702	mtrex	100	86.609	Gadus_morhua
ENSSLDG00000006301	mtrex	100	83.638	ENSGALG00000014709	MTREX	86	83.638	Gallus_gallus
ENSSLDG00000006301	mtrex	100	93.635	ENSGAFG00000012425	mtrex	100	93.635	Gambusia_affinis
ENSSLDG00000006301	mtrex	100	88.717	ENSGACG00000016260	mtrex	99	92.935	Gasterosteus_aculeatus
ENSSLDG00000006301	mtrex	100	83.685	ENSGAGG00000020036	MTREX	100	83.781	Gopherus_agassizii
ENSSLDG00000006301	mtrex	100	83.302	ENSGGOG00000001867	MTREX	100	83.397	Gorilla_gorilla
ENSSLDG00000006301	mtrex	100	95.468	ENSHBUG00000006229	mtrex	100	95.468	Haplochromis_burtoni
ENSSLDG00000006301	mtrex	100	83.270	ENSHGLG00000019445	SKIV2L2	100	82.969	Heterocephalus_glaber_female
ENSSLDG00000006301	mtrex	100	83.270	ENSHGLG00100011833	SKIV2L2	100	82.969	Heterocephalus_glaber_male
ENSSLDG00000006301	mtrex	95	91.641	ENSHCOG00000019995	mtrex	100	91.845	Hippocampus_comes
ENSSLDG00000006301	mtrex	100	86.141	ENSIPUG00000024348	skiv2l2	100	86.141	Ictalurus_punctatus
ENSSLDG00000006301	mtrex	100	83.302	ENSSTOG00000010802	MTREX	100	83.492	Ictidomys_tridecemlineatus
ENSSLDG00000006301	mtrex	100	78.770	ENSJJAG00000020975	Mtrex	100	78.770	Jaculus_jaculus
ENSSLDG00000006301	mtrex	100	94.696	ENSKMAG00000012642	mtrex	100	94.696	Kryptolebias_marmoratus
ENSSLDG00000006301	mtrex	100	95.757	ENSLBEG00000019367	mtrex	100	95.757	Labrus_bergylta
ENSSLDG00000006301	mtrex	100	84.630	ENSLACG00000009075	MTREX	100	84.630	Latimeria_chalumnae
ENSSLDG00000006301	mtrex	100	86.840	ENSLOCG00000010186	mtrex	100	86.840	Lepisosteus_oculatus
ENSSLDG00000006301	mtrex	95	85.610	ENSLAFG00000010497	MTREX	100	81.220	Loxodonta_africana
ENSSLDG00000006301	mtrex	100	83.302	ENSMFAG00000031610	MTREX	100	83.333	Macaca_fascicularis
ENSSLDG00000006301	mtrex	100	83.619	ENSMMUG00000010379	MTREX	100	83.619	Macaca_mulatta
ENSSLDG00000006301	mtrex	100	83.302	ENSMNEG00000032746	MTREX	100	83.333	Macaca_nemestrina
ENSSLDG00000006301	mtrex	100	83.302	ENSMLEG00000041051	MTREX	100	83.333	Mandrillus_leucophaeus
ENSSLDG00000006301	mtrex	100	96.507	ENSMAMG00000016753	mtrex	100	96.507	Mastacembelus_armatus
ENSSLDG00000006301	mtrex	100	95.468	ENSMZEG00005000414	mtrex	100	95.468	Maylandia_zebra
ENSSLDG00000006301	mtrex	95	63.427	ENSMGAG00000003980	MTREX	99	62.072	Meleagris_gallopavo
ENSSLDG00000006301	mtrex	100	83.222	ENSMAUG00000010727	Mtrex	100	83.668	Mesocricetus_auratus
ENSSLDG00000006301	mtrex	100	83.779	ENSMICG00000012779	MTREX	100	83.874	Microcebus_murinus
ENSSLDG00000006301	mtrex	100	83.492	ENSMOCG00000019886	Mtrex	100	83.492	Microtus_ochrogaster
ENSSLDG00000006301	mtrex	100	94.925	ENSMMOG00000002476	mtrex	100	94.925	Mola_mola
ENSSLDG00000006301	mtrex	100	83.734	ENSMODG00000019494	MTREX	100	84.054	Monodelphis_domestica
ENSSLDG00000006301	mtrex	100	88.627	ENSMALG00000002917	mtrex	99	91.020	Monopterus_albus
ENSSLDG00000006301	mtrex	100	83.174	MGP_CAROLIEiJ_G0018896	Mtrex	100	83.174	Mus_caroli
ENSSLDG00000006301	mtrex	100	83.078	ENSMUSG00000016018	Mtrex	100	83.078	Mus_musculus
ENSSLDG00000006301	mtrex	100	83.174	MGP_PahariEiJ_G0015967	Mtrex	100	83.174	Mus_pahari
ENSSLDG00000006301	mtrex	100	83.078	MGP_SPRETEiJ_G0019775	Mtrex	100	83.078	Mus_spretus
ENSSLDG00000006301	mtrex	100	83.588	ENSMPUG00000007619	MTREX	100	83.683	Mustela_putorius_furo
ENSSLDG00000006301	mtrex	100	82.841	ENSMLUG00000001152	MTREX	100	82.873	Myotis_lucifugus
ENSSLDG00000006301	mtrex	100	83.492	ENSNGAG00000011938	Mtrex	100	83.588	Nannospalax_galili
ENSSLDG00000006301	mtrex	100	95.275	ENSNBRG00000011293	mtrex	100	95.275	Neolamprologus_brichardi
ENSSLDG00000006301	mtrex	100	79.524	ENSNLEG00000001494	MTREX	100	79.563	Nomascus_leucogenys
ENSSLDG00000006301	mtrex	83	96.078	ENSMEUG00000006496	-	83	96.078	Notamacropus_eugenii
ENSSLDG00000006301	mtrex	100	70.431	ENSOPRG00000008009	MTREX	100	70.554	Ochotona_princeps
ENSSLDG00000006301	mtrex	100	82.729	ENSODEG00000017234	MTREX	100	82.824	Octodon_degus
ENSSLDG00000006301	mtrex	100	95.275	ENSONIG00000007587	mtrex	100	95.275	Oreochromis_niloticus
ENSSLDG00000006301	mtrex	51	83.172	ENSOANG00000004885	-	99	83.172	Ornithorhynchus_anatinus
ENSSLDG00000006301	mtrex	100	83.748	ENSOCUG00000004463	MTREX	100	83.748	Oryctolagus_cuniculus
ENSSLDG00000006301	mtrex	100	92.768	ENSORLG00000005443	mtrex	100	92.768	Oryzias_latipes
ENSSLDG00000006301	mtrex	100	92.768	ENSORLG00020006329	mtrex	100	92.768	Oryzias_latipes_hni
ENSSLDG00000006301	mtrex	100	92.768	ENSORLG00015012924	mtrex	100	92.768	Oryzias_latipes_hsok
ENSSLDG00000006301	mtrex	100	92.589	ENSOMEG00000008825	mtrex	100	92.589	Oryzias_melastigma
ENSSLDG00000006301	mtrex	100	83.397	ENSOGAG00000002886	MTREX	100	83.524	Otolemur_garnettii
ENSSLDG00000006301	mtrex	100	83.191	ENSOARG00000007764	MTREX	100	83.191	Ovis_aries
ENSSLDG00000006301	mtrex	100	83.302	ENSPPAG00000039291	MTREX	100	83.397	Pan_paniscus
ENSSLDG00000006301	mtrex	100	83.779	ENSPPRG00000019701	MTREX	100	83.429	Panthera_pardus
ENSSLDG00000006301	mtrex	100	82.443	ENSPTIG00000009313	MTREX	100	82.095	Panthera_tigris_altaica
ENSSLDG00000006301	mtrex	100	83.302	ENSPTRG00000016878	MTREX	100	83.397	Pan_troglodytes
ENSSLDG00000006301	mtrex	100	83.206	ENSPANG00000009697	MTREX	100	83.238	Papio_anubis
ENSSLDG00000006301	mtrex	100	86.840	ENSPKIG00000020833	mtrex	100	86.840	Paramormyrops_kingsleyae
ENSSLDG00000006301	mtrex	100	84.038	ENSPSIG00000012150	MTREX	100	84.165	Pelodiscus_sinensis
ENSSLDG00000006301	mtrex	100	92.729	ENSPMGG00000002582	mtrex	100	92.729	Periophthalmus_magnuspinnatus
ENSSLDG00000006301	mtrex	95	65.354	ENSPMAG00000009668	mtrex	100	65.354	Petromyzon_marinus
ENSSLDG00000006301	mtrex	95	87.828	ENSPCIG00000024730	MTREX	100	87.828	Phascolarctos_cinereus
ENSSLDG00000006301	mtrex	78	95.178	ENSPFOG00000003141	mtrex	100	95.431	Poecilia_formosa
ENSSLDG00000006301	mtrex	100	93.925	ENSPLAG00000021311	mtrex	100	93.925	Poecilia_latipinna
ENSSLDG00000006301	mtrex	96	94.781	ENSPMEG00000010597	mtrex	99	94.781	Poecilia_mexicana
ENSSLDG00000006301	mtrex	100	93.732	ENSPREG00000003089	mtrex	100	93.732	Poecilia_reticulata
ENSSLDG00000006301	mtrex	94	87.686	ENSPPYG00000015469	MTREX	98	83.123	Pongo_abelii
ENSSLDG00000006301	mtrex	94	74.419	ENSPCAG00000013120	MTREX	94	74.419	Procavia_capensis
ENSSLDG00000006301	mtrex	99	77.906	ENSPCOG00000018092	MTREX	100	77.906	Propithecus_coquereli
ENSSLDG00000006301	mtrex	100	83.492	ENSPVAG00000002445	MTREX	100	83.588	Pteropus_vampyrus
ENSSLDG00000006301	mtrex	100	95.371	ENSPNYG00000006164	mtrex	100	95.371	Pundamilia_nyererei
ENSSLDG00000006301	mtrex	100	87.488	ENSPNAG00000008794	mtrex	100	87.777	Pygocentrus_nattereri
ENSSLDG00000006301	mtrex	99	82.722	ENSRNOG00000010125	Mtrex	97	82.722	Rattus_norvegicus
ENSSLDG00000006301	mtrex	100	81.489	ENSRBIG00000034930	MTREX	100	81.524	Rhinopithecus_bieti
ENSSLDG00000006301	mtrex	100	83.206	ENSRROG00000039895	MTREX	100	83.238	Rhinopithecus_roxellana
ENSSLDG00000006301	mtrex	93	55.892	YJL050W	MTR4	92	54.518	Saccharomyces_cerevisiae
ENSSLDG00000006301	mtrex	100	83.588	ENSSBOG00000026693	MTREX	100	83.683	Saimiri_boliviensis_boliviensis
ENSSLDG00000006301	mtrex	96	87.280	ENSSHAG00000004600	MTREX	100	85.145	Sarcophilus_harrisii
ENSSLDG00000006301	mtrex	100	88.065	ENSSFOG00015014355	skiv2l2	100	87.969	Scleropages_formosus
ENSSLDG00000006301	mtrex	100	95.853	ENSSMAG00000007572	mtrex	100	95.853	Scophthalmus_maximus
ENSSLDG00000006301	mtrex	100	99.807	ENSSDUG00000023789	mtrex	100	99.807	Seriola_dumerili
ENSSLDG00000006301	mtrex	95	87.774	ENSSARG00000008387	MTREX	100	81.285	Sorex_araneus
ENSSLDG00000006301	mtrex	89	85.406	ENSSPUG00000007071	MTREX	96	85.406	Sphenodon_punctatus
ENSSLDG00000006301	mtrex	100	92.458	ENSSPAG00000011319	mtrex	100	92.556	Stegastes_partitus
ENSSLDG00000006301	mtrex	100	83.492	ENSSSCG00000016911	MTREX	100	83.588	Sus_scrofa
ENSSLDG00000006301	mtrex	100	82.229	ENSTGUG00000002480	MTREX	100	82.229	Taeniopygia_guttata
ENSSLDG00000006301	mtrex	100	92.671	ENSTRUG00000014571	mtrex	100	92.671	Takifugu_rubripes
ENSSLDG00000006301	mtrex	100	68.989	ENSTBEG00000007769	MTREX	100	68.952	Tupaia_belangeri
ENSSLDG00000006301	mtrex	100	83.365	ENSTTRG00000008678	MTREX	100	83.365	Tursiops_truncatus
ENSSLDG00000006301	mtrex	100	83.397	ENSUAMG00000023061	MTREX	100	83.492	Ursus_americanus
ENSSLDG00000006301	mtrex	100	83.269	ENSUMAG00000009373	MTREX	99	88.699	Ursus_maritimus
ENSSLDG00000006301	mtrex	100	74.286	ENSVPAG00000011174	MTREX	100	74.286	Vicugna_pacos
ENSSLDG00000006301	mtrex	100	83.683	ENSVVUG00000021337	MTREX	100	83.779	Vulpes_vulpes
ENSSLDG00000006301	mtrex	100	85.082	ENSXETG00000032798	MTREX	100	85.082	Xenopus_tropicalis
ENSSLDG00000006301	mtrex	100	94.021	ENSXMAG00000004799	mtrex	100	94.021	Xiphophorus_maculatus