EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000006311 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: RNA-binding protein 4B-like
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 3783 bases
Position: chrPEQF01099371.1:361134-364916
Accession: 111672107
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000007944	RRM_5	PF13893.6	1.6e-11	1	2
ENSSLDP00000007944	RRM_5	PF13893.6	1.6e-11	2	2
ENSSLDP00000007944	RRM_1	PF00076.22	3.9e-33	1	2
ENSSLDP00000007944	RRM_1	PF00076.22	3.9e-33	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000008199	-	1718	XM_023429401	ENSSLDP00000007944	551 (aa)	XP_023285169	UPI000C6FB864

Gene Model

Click here to download ENSSLDG00000006311's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000006311's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000006311	-	71	49.278	ENSSLDG00000006472	rbm14b	65	62.007

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000006311	-	71	49.278	ENSAPOG00000021712	rbm14b	68	62.007	Acanthochromis_polyacanthus
ENSSLDG00000006311	-	99	91.921	ENSAPOG00000003380	-	99	91.023	Acanthochromis_polyacanthus
ENSSLDG00000006311	-	68	61.189	ENSACIG00000000381	rbm14b	65	62.007	Amphilophus_citrinellus
ENSSLDG00000006311	-	99	90.794	ENSACIG00000021173	-	99	90.072	Amphilophus_citrinellus
ENSSLDG00000006311	-	100	91.023	ENSAOCG00000001659	-	100	90.126	Amphiprion_ocellaris
ENSSLDG00000006311	-	66	56.136	ENSAOCG00000008941	rbm14b	82	55.037	Amphiprion_ocellaris
ENSSLDG00000006311	-	66	55.526	ENSAPEG00000003161	rbm14b	82	54.208	Amphiprion_percula
ENSSLDG00000006311	-	99	92.238	ENSAPEG00000016988	-	99	91.336	Amphiprion_percula
ENSSLDG00000006311	-	95	89.434	ENSATEG00000009700	-	94	89.474	Anabas_testudineus
ENSSLDG00000006311	-	66	58.073	ENSATEG00000003034	rbm14b	78	56.618	Anabas_testudineus
ENSSLDG00000006311	-	71	49.587	ENSACLG00000014355	rbm14b	64	62.007	Astatotilapia_calliptera
ENSSLDG00000006311	-	100	91.039	ENSACLG00000009112	-	97	90.143	Astatotilapia_calliptera
ENSSLDG00000006311	-	67	48.673	ENSAMXG00000031225	rbm14b	67	60.870	Astyanax_mexicanus
ENSSLDG00000006311	-	71	62.312	ENSAMXG00000007233	rbm14a	82	62.312	Astyanax_mexicanus
ENSSLDG00000006311	-	100	85.099	ENSCSEG00000019690	-	100	84.560	Cynoglossus_semilaevis
ENSSLDG00000006311	-	66	53.717	ENSCSEG00000000357	rbm14b	80	51.927	Cynoglossus_semilaevis
ENSSLDG00000006311	-	100	84.670	ENSCVAG00000014858	-	100	84.314	Cyprinodon_variegatus
ENSSLDG00000006311	-	71	49.167	ENSCVAG00000013776	rbm14b	83	48.958	Cyprinodon_variegatus
ENSSLDG00000006311	-	65	60.289	ENSDARG00000103834	rbm14b	64	61.011	Danio_rerio
ENSSLDG00000006311	-	71	60.606	ENSDARG00000012723	rbm14a	80	60.506	Danio_rerio
ENSSLDG00000006311	-	82	58.167	ENSELUG00000023633	rbm14a	82	58.295	Esox_lucius
ENSSLDG00000006311	-	66	62.774	ENSELUG00000004690	rbm14b	70	62.774	Esox_lucius
ENSSLDG00000006311	-	95	82.714	ENSFHEG00000020913	-	96	84.302	Fundulus_heteroclitus
ENSSLDG00000006311	-	71	49.896	ENSFHEG00000021265	rbm14b	83	50.312	Fundulus_heteroclitus
ENSSLDG00000006311	-	70	78.920	ENSGMOG00000010840	-	78	78.920	Gadus_morhua
ENSSLDG00000006311	-	99	83.363	ENSGAFG00000004455	-	99	82.821	Gambusia_affinis
ENSSLDG00000006311	-	71	48.963	ENSGAFG00000001924	rbm14b	83	47.412	Gambusia_affinis
ENSSLDG00000006311	-	85	88.223	ENSGACG00000020440	-	95	88.009	Gasterosteus_aculeatus
ENSSLDG00000006311	-	71	49.587	ENSHBUG00000016754	rbm14b	64	62.007	Haplochromis_burtoni
ENSSLDG00000006311	-	100	91.039	ENSHBUG00000003665	-	97	90.143	Haplochromis_burtoni
ENSSLDG00000006311	-	73	53.606	ENSHCOG00000012571	rbm14b	99	66.038	Hippocampus_comes
ENSSLDG00000006311	-	95	78.229	ENSHCOG00000004071	-	96	78.462	Hippocampus_comes
ENSSLDG00000006311	-	65	60.204	ENSIPUG00000009089	rbm14b	70	60.690	Ictalurus_punctatus
ENSSLDG00000006311	-	71	56.867	ENSIPUG00000021256	rbm14a	83	56.763	Ictalurus_punctatus
ENSSLDG00000006311	-	95	85.932	ENSKMAG00000008514	-	96	86.706	Kryptolebias_marmoratus
ENSSLDG00000006311	-	50	60.839	ENSKMAG00000020444	rbm14b	65	61.649	Kryptolebias_marmoratus
ENSSLDG00000006311	-	100	88.108	ENSLBEG00000001217	-	100	86.380	Labrus_bergylta
ENSSLDG00000006311	-	71	47.609	ENSLBEG00000027934	rbm14b	76	49.064	Labrus_bergylta
ENSSLDG00000006311	-	71	48.649	ENSMAMG00000014394	rbm14b	61	61.905	Mastacembelus_armatus
ENSSLDG00000006311	-	100	89.427	ENSMAMG00000021313	-	100	88.710	Mastacembelus_armatus
ENSSLDG00000006311	-	71	49.587	ENSMZEG00005020834	rbm14b	65	62.007	Maylandia_zebra
ENSSLDG00000006311	-	100	91.039	ENSMZEG00005001201	-	100	90.143	Maylandia_zebra
ENSSLDG00000006311	-	99	84.672	ENSMMOG00000014501	-	99	85.299	Mola_mola
ENSSLDG00000006311	-	67	56.786	ENSMMOG00000012912	rbm14b	69	56.786	Mola_mola
ENSSLDG00000006311	-	66	55.875	ENSMALG00000015445	rbm14b	84	56.061	Monopterus_albus
ENSSLDG00000006311	-	71	49.587	ENSNBRG00000003378	rbm14b	65	62.007	Neolamprologus_brichardi
ENSSLDG00000006311	-	99	91.007	ENSNBRG00000004960	-	99	89.748	Neolamprologus_brichardi
ENSSLDG00000006311	-	66	57.364	ENSONIG00000013035	rbm14b	82	56.618	Oreochromis_niloticus
ENSSLDG00000006311	-	85	89.474	ENSONIG00000008557	-	95	89.263	Oreochromis_niloticus
ENSSLDG00000006311	-	100	84.409	ENSORLG00000001900	-	99	83.066	Oryzias_latipes
ENSSLDG00000006311	-	71	49.480	ENSORLG00000008051	rbm14b	82	48.857	Oryzias_latipes
ENSSLDG00000006311	-	71	49.167	ENSORLG00020005551	rbm14b	80	48.542	Oryzias_latipes_hni
ENSSLDG00000006311	-	100	84.409	ENSORLG00020019144	-	99	83.066	Oryzias_latipes_hni
ENSSLDG00000006311	-	100	84.409	ENSORLG00015000082	-	100	84.588	Oryzias_latipes_hsok
ENSSLDG00000006311	-	71	49.272	ENSORLG00015022683	rbm14b	82	48.649	Oryzias_latipes_hsok
ENSSLDG00000006311	-	70	54.250	ENSOMEG00000000910	rbm14b	78	54.321	Oryzias_melastigma
ENSSLDG00000006311	-	80	87.611	ENSOMEG00000006508	-	96	94.000	Oryzias_melastigma
ENSSLDG00000006311	-	70	51.852	ENSPKIG00000009078	rbm14b	85	50.756	Paramormyrops_kingsleyae
ENSSLDG00000006311	-	77	78.873	ENSPMGG00000018869	-	93	87.162	Periophthalmus_magnuspinnatus
ENSSLDG00000006311	-	71	49.896	ENSPMGG00000013064	rbm14b	67	61.786	Periophthalmus_magnuspinnatus
ENSSLDG00000006311	-	71	48.963	ENSPFOG00000003614	rbm14b	83	48.861	Poecilia_formosa
ENSSLDG00000006311	-	95	84.615	ENSPFOG00000004843	-	96	85.714	Poecilia_formosa
ENSSLDG00000006311	-	95	84.615	ENSPLAG00000017359	-	96	85.714	Poecilia_latipinna
ENSSLDG00000006311	-	71	48.548	ENSPLAG00000001395	rbm14b	83	47.412	Poecilia_latipinna
ENSSLDG00000006311	-	71	48.963	ENSPMEG00000012911	rbm14b	66	62.007	Poecilia_mexicana
ENSSLDG00000006311	-	100	85.357	ENSPMEG00000004894	-	100	84.643	Poecilia_mexicana
ENSSLDG00000006311	-	71	48.340	ENSPREG00000003013	rbm14b	83	47.205	Poecilia_reticulata
ENSSLDG00000006311	-	95	84.240	ENSPREG00000007274	-	96	85.323	Poecilia_reticulata
ENSSLDG00000006311	-	100	91.039	ENSPNYG00000015906	-	100	90.143	Pundamilia_nyererei
ENSSLDG00000006311	-	71	49.587	ENSPNYG00000023605	rbm14b	65	62.007	Pundamilia_nyererei
ENSSLDG00000006311	-	64	60.410	ENSPNAG00000001977	rbm14b	65	61.232	Pygocentrus_nattereri
ENSSLDG00000006311	-	71	59.952	ENSPNAG00000012473	rbm14a	84	59.666	Pygocentrus_nattereri
ENSSLDG00000006311	-	70	50.985	ENSSFOG00015023796	rbm14b	84	51.193	Scleropages_formosus
ENSSLDG00000006311	-	100	92.391	ENSSMAG00000002055	-	100	91.486	Scophthalmus_maximus
ENSSLDG00000006311	-	66	49.889	ENSSMAG00000004522	rbm14b	67	63.214	Scophthalmus_maximus
ENSSLDG00000006311	-	71	49.278	ENSSDUG00000007975	rbm14b	65	62.007	Seriola_dumerili
ENSSLDG00000006311	-	100	99.456	ENSSDUG00000020756	-	100	99.456	Seriola_dumerili
ENSSLDG00000006311	-	71	49.278	ENSSPAG00000004231	rbm14b	64	62.007	Stegastes_partitus
ENSSLDG00000006311	-	99	92.058	ENSSPAG00000010825	-	99	91.516	Stegastes_partitus
ENSSLDG00000006311	-	95	80.943	ENSTRUG00000009504	-	91	79.612	Takifugu_rubripes
ENSSLDG00000006311	-	71	47.835	ENSTRUG00000005716	rbm14b	66	61.786	Takifugu_rubripes
ENSSLDG00000006311	-	84	75.319	ENSTNIG00000000058	-	94	76.774	Tetraodon_nigroviridis
ENSSLDG00000006311	-	66	53.003	ENSTNIG00000006844	rbm14b	79	52.826	Tetraodon_nigroviridis
ENSSLDG00000006311	-	99	82.306	ENSXCOG00000006825	-	99	81.511	Xiphophorus_couchianus
ENSSLDG00000006311	-	71	48.963	ENSXMAG00000008390	rbm14b	66	61.649	Xiphophorus_maculatus
ENSSLDG00000006311	-	100	85.357	ENSXMAG00000000338	-	100	84.464	Xiphophorus_maculatus