EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000006440 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: 60S ribosomal protein L28-like
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 842 bases
Position: chrPEQF01047640.1:513-1354
Accession: 111666663
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000008096	Ribosomal_L28e	PF01778.17	6.1e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000008361	-	288	XM_023422056	ENSSLDP00000008096	95 (aa)	XP_023277824	UPI000C6F832E

Gene Model

Click here to download ENSSLDG00000006440's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000006440's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000006440	-	75	97.183	ENSSLDG00000000414	rpl28	52	97.183
ENSSLDG00000006440	-	80	34.884	ENSSLDG00000002211	-	89	34.884

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000006440	-	86	74.390	ENSG00000108107	RPL28	99	83.824	Homo_sapiens
ENSSLDG00000006440	-	85	83.951	ENSAPOG00000023913	rpl28	56	83.951	Acanthochromis_polyacanthus
ENSSLDG00000006440	-	86	74.390	ENSAMEG00000003764	RPL28	57	74.390	Ailuropoda_melanoleuca
ENSSLDG00000006440	-	74	92.857	ENSACIG00000014369	rpl28	51	92.857	Amphilophus_citrinellus
ENSSLDG00000006440	-	85	85.185	ENSAOCG00000019874	rpl28	53	85.185	Amphiprion_ocellaris
ENSSLDG00000006440	-	85	85.185	ENSAPEG00000020972	rpl28	56	85.185	Amphiprion_percula
ENSSLDG00000006440	-	75	94.366	ENSATEG00000013839	rpl28	52	94.366	Anabas_testudineus
ENSSLDG00000006440	-	85	53.086	ENSACAG00000006100	-	56	53.086	Anolis_carolinensis
ENSSLDG00000006440	-	85	72.840	ENSACAG00000015980	-	56	72.840	Anolis_carolinensis
ENSSLDG00000006440	-	86	74.390	ENSANAG00000034536	RPL28	99	83.824	Aotus_nancymaae
ENSSLDG00000006440	-	74	94.286	ENSACLG00000027917	rpl28	50	94.286	Astatotilapia_calliptera
ENSSLDG00000006440	-	73	84.058	ENSAMXG00000042541	rpl28	50	84.058	Astyanax_mexicanus
ENSSLDG00000006440	-	83	41.975	WBGene00004442	rpl-28	63	41.975	Caenorhabditis_elegans
ENSSLDG00000006440	-	86	74.390	ENSCJAG00000000869	RPL28	90	84.058	Callithrix_jacchus
ENSSLDG00000006440	-	86	75.610	ENSCAFG00000002585	RPL28	57	75.610	Canis_familiaris
ENSSLDG00000006440	-	86	75.610	ENSCAFG00020015496	-	57	75.610	Canis_lupus_dingo
ENSSLDG00000006440	-	86	74.390	ENSCAFG00020024049	-	57	74.390	Canis_lupus_dingo
ENSSLDG00000006440	-	69	78.788	ENSCAFG00020007821	-	52	78.788	Canis_lupus_dingo
ENSSLDG00000006440	-	86	73.171	ENSCHIG00000025540	-	57	73.171	Capra_hircus
ENSSLDG00000006440	-	86	57.317	ENSTSYG00000036697	-	55	57.317	Carlito_syrichta
ENSSLDG00000006440	-	86	74.390	ENSTSYG00000033853	RPL28	57	74.390	Carlito_syrichta
ENSSLDG00000006440	-	86	51.220	ENSTSYG00000035503	-	60	51.220	Carlito_syrichta
ENSSLDG00000006440	-	86	73.171	ENSCAPG00000007161	-	57	73.171	Cavia_aperea
ENSSLDG00000006440	-	86	71.951	ENSCPOG00000023112	-	57	71.951	Cavia_porcellus
ENSSLDG00000006440	-	86	74.390	ENSCPOG00000012833	-	57	74.390	Cavia_porcellus
ENSSLDG00000006440	-	84	61.250	ENSCCAG00000034537	-	92	61.250	Cebus_capucinus
ENSSLDG00000006440	-	86	74.390	ENSCCAG00000025765	RPL28	99	83.824	Cebus_capucinus
ENSSLDG00000006440	-	88	58.333	ENSCCAG00000012793	-	65	58.333	Cebus_capucinus
ENSSLDG00000006440	-	86	48.780	ENSCCAG00000003452	-	51	48.780	Cebus_capucinus
ENSSLDG00000006440	-	86	64.634	ENSCCAG00000018730	-	57	64.634	Cebus_capucinus
ENSSLDG00000006440	-	86	74.390	ENSCATG00000031417	RPL28	99	83.824	Cercocebus_atys
ENSSLDG00000006440	-	86	74.390	ENSCLAG00000000684	RPL28	57	74.390	Chinchilla_lanigera
ENSSLDG00000006440	-	100	66.316	ENSCSAG00000018419	-	67	66.316	Chlorocebus_sabaeus
ENSSLDG00000006440	-	86	74.390	ENSCSAG00000001738	-	57	74.390	Chlorocebus_sabaeus
ENSSLDG00000006440	-	69	63.636	ENSCSAVG00000008832	-	53	63.636	Ciona_savignyi
ENSSLDG00000006440	-	86	74.390	ENSCANG00000038322	RPL28	99	83.824	Colobus_angolensis_palliatus
ENSSLDG00000006440	-	86	73.171	ENSCANG00000002437	-	57	73.171	Colobus_angolensis_palliatus
ENSSLDG00000006440	-	86	70.732	ENSCANG00000021622	-	57	70.732	Colobus_angolensis_palliatus
ENSSLDG00000006440	-	86	74.390	ENSCGRG00001023644	Rpl28	57	74.390	Cricetulus_griseus_chok1gshd
ENSSLDG00000006440	-	74	92.857	ENSCSEG00000001312	rpl28	51	92.857	Cynoglossus_semilaevis
ENSSLDG00000006440	-	75	90.141	ENSCVAG00000022473	rpl28	52	90.141	Cyprinodon_variegatus
ENSSLDG00000006440	-	87	73.494	ENSDARG00000005791	rpl28	60	73.494	Danio_rerio
ENSSLDG00000006440	-	86	74.390	ENSDNOG00000044172	-	57	74.390	Dasypus_novemcinctus
ENSSLDG00000006440	-	86	54.867	ENSDNOG00000046131	RPL28	68	54.867	Dasypus_novemcinctus
ENSSLDG00000006440	-	86	75.610	ENSDORG00000012809	Rpl28	57	75.610	Dipodomys_ordii
ENSSLDG00000006440	-	88	54.762	ENSEBUG00000009129	rpl28	65	54.762	Eptatretus_burgeri
ENSSLDG00000006440	-	86	74.390	ENSEASG00005020779	RPL28	57	74.390	Equus_asinus_asinus
ENSSLDG00000006440	-	74	90.000	ENSELUG00000001730	rpl28	51	90.000	Esox_lucius
ENSSLDG00000006440	-	86	74.390	ENSFCAG00000005639	-	57	74.390	Felis_catus
ENSSLDG00000006440	-	86	74.390	ENSFDAG00000021448	RPL28	57	74.390	Fukomys_damarensis
ENSSLDG00000006440	-	74	90.000	ENSGMOG00000015325	rpl28	51	90.000	Gadus_morhua
ENSSLDG00000006440	-	75	92.958	ENSGAFG00000012973	rpl28	52	92.958	Gambusia_affinis
ENSSLDG00000006440	-	74	92.857	ENSGACG00000016089	rpl28	51	92.857	Gasterosteus_aculeatus
ENSSLDG00000006440	-	88	70.238	ENSGAGG00000016908	RPL28	61	70.238	Gopherus_agassizii
ENSSLDG00000006440	-	86	74.390	ENSGGOG00000022653	-	99	83.824	Gorilla_gorilla
ENSSLDG00000006440	-	74	94.286	ENSHBUG00000007390	rpl28	50	94.286	Haplochromis_burtoni
ENSSLDG00000006440	-	86	73.171	ENSHGLG00000009865	RPL28	57	73.171	Heterocephalus_glaber_female
ENSSLDG00000006440	-	86	73.171	ENSHGLG00100005407	RPL28	57	73.171	Heterocephalus_glaber_male
ENSSLDG00000006440	-	75	85.915	ENSHCOG00000003134	rpl28	52	85.915	Hippocampus_comes
ENSSLDG00000006440	-	73	82.609	ENSIPUG00000004935	rpl28	50	82.609	Ictalurus_punctatus
ENSSLDG00000006440	-	74	82.857	ENSSTOG00000008006	RPL28	51	82.857	Ictidomys_tridecemlineatus
ENSSLDG00000006440	-	86	74.390	ENSJJAG00000019841	Rpl28	57	74.390	Jaculus_jaculus
ENSSLDG00000006440	-	86	84.146	ENSKMAG00000011412	rpl28	57	84.146	Kryptolebias_marmoratus
ENSSLDG00000006440	-	74	92.857	ENSLBEG00000027857	rpl28	51	92.857	Labrus_bergylta
ENSSLDG00000006440	-	55	75.000	ENSLACG00000011783	RPL28	55	76.271	Latimeria_chalumnae
ENSSLDG00000006440	-	86	75.610	ENSLAFG00000022257	RPL28	57	75.610	Loxodonta_africana
ENSSLDG00000006440	-	86	74.390	ENSMFAG00000043131	RPL28	99	83.824	Macaca_fascicularis
ENSSLDG00000006440	-	86	74.390	ENSMMUG00000015901	RPL28	99	83.824	Macaca_mulatta
ENSSLDG00000006440	-	86	74.390	ENSMNEG00000032714	RPL28	99	83.824	Macaca_nemestrina
ENSSLDG00000006440	-	61	79.310	ENSMLEG00000039498	-	69	79.310	Mandrillus_leucophaeus
ENSSLDG00000006440	-	86	74.390	ENSMLEG00000039619	RPL28	99	83.824	Mandrillus_leucophaeus
ENSSLDG00000006440	-	85	87.654	ENSMAMG00000017519	rpl28	56	87.654	Mastacembelus_armatus
ENSSLDG00000006440	-	74	94.286	ENSMZEG00005002151	rpl28	50	94.286	Maylandia_zebra
ENSSLDG00000006440	-	86	59.756	ENSMAUG00000017070	-	61	59.756	Mesocricetus_auratus
ENSSLDG00000006440	-	86	70.732	ENSMAUG00000004738	-	62	70.732	Mesocricetus_auratus
ENSSLDG00000006440	-	86	74.390	ENSMAUG00000000783	-	57	74.390	Mesocricetus_auratus
ENSSLDG00000006440	-	86	74.390	ENSMAUG00000021147	-	57	74.390	Mesocricetus_auratus
ENSSLDG00000006440	-	86	74.390	ENSMICG00000000996	RPL28	88	81.944	Microcebus_murinus
ENSSLDG00000006440	-	86	50.000	ENSMICG00000033709	-	50	50.000	Microcebus_murinus
ENSSLDG00000006440	-	86	74.390	ENSMOCG00000006245	-	57	74.390	Microtus_ochrogaster
ENSSLDG00000006440	-	86	71.084	ENSMOCG00000006881	-	57	71.084	Microtus_ochrogaster
ENSSLDG00000006440	-	86	73.171	ENSMOCG00000008075	-	57	73.171	Microtus_ochrogaster
ENSSLDG00000006440	-	75	91.549	ENSMMOG00000004489	rpl28	52	91.549	Mola_mola
ENSSLDG00000006440	-	86	71.951	ENSMODG00000000275	RPL28	57	71.951	Monodelphis_domestica
ENSSLDG00000006440	-	75	92.958	ENSMALG00000004571	rpl28	52	92.958	Monopterus_albus
ENSSLDG00000006440	-	86	74.390	MGP_CAROLIEiJ_G0029130	Rpl28	57	74.390	Mus_caroli
ENSSLDG00000006440	-	86	74.390	ENSMUSG00000030432	Rpl28	57	74.390	Mus_musculus
ENSSLDG00000006440	-	74	82.857	MGP_PahariEiJ_G0020999	Rpl28	51	82.857	Mus_pahari
ENSSLDG00000006440	-	86	74.390	MGP_SPRETEiJ_G0030183	Rpl28	57	74.390	Mus_spretus
ENSSLDG00000006440	-	86	74.390	ENSMPUG00000007450	RPL28	57	74.390	Mustela_putorius_furo
ENSSLDG00000006440	-	86	70.732	ENSMLUG00000023789	-	57	70.732	Myotis_lucifugus
ENSSLDG00000006440	-	86	70.732	ENSMLUG00000023198	-	57	70.732	Myotis_lucifugus
ENSSLDG00000006440	-	86	74.390	ENSNLEG00000010503	-	99	83.824	Nomascus_leucogenys
ENSSLDG00000006440	-	86	75.610	ENSOPRG00000000463	-	57	75.610	Ochotona_princeps
ENSSLDG00000006440	-	86	73.171	ENSODEG00000019864	-	57	73.171	Octodon_degus
ENSSLDG00000006440	-	86	69.512	ENSODEG00000019117	-	57	69.512	Octodon_degus
ENSSLDG00000006440	-	86	73.171	ENSODEG00000020377	-	57	73.171	Octodon_degus
ENSSLDG00000006440	-	86	74.390	ENSODEG00000010391	-	57	74.390	Octodon_degus
ENSSLDG00000006440	-	74	94.286	ENSONIG00000007486	rpl28	51	94.286	Oreochromis_niloticus
ENSSLDG00000006440	-	86	69.512	ENSOCUG00000027875	-	57	69.512	Oryctolagus_cuniculus
ENSSLDG00000006440	-	86	74.390	ENSOCUG00000027112	-	57	74.390	Oryctolagus_cuniculus
ENSSLDG00000006440	-	74	91.429	ENSORLG00000005108	rpl28	51	91.429	Oryzias_latipes
ENSSLDG00000006440	-	74	91.429	ENSORLG00020007182	rpl28	51	91.429	Oryzias_latipes_hni
ENSSLDG00000006440	-	74	91.429	ENSORLG00015013944	rpl28	51	91.429	Oryzias_latipes_hsok
ENSSLDG00000006440	-	74	91.429	ENSOMEG00000009716	rpl28	51	91.429	Oryzias_melastigma
ENSSLDG00000006440	-	86	74.390	ENSOGAG00000025533	RPL28	57	74.390	Otolemur_garnettii
ENSSLDG00000006440	-	86	74.390	ENSOARG00000001428	RPL28	57	74.390	Ovis_aries
ENSSLDG00000006440	-	88	50.000	ENSPPAG00000034138	-	55	50.000	Pan_paniscus
ENSSLDG00000006440	-	86	54.878	ENSPPAG00000032901	-	58	54.878	Pan_paniscus
ENSSLDG00000006440	-	86	74.390	ENSPPAG00000038000	-	99	83.824	Pan_paniscus
ENSSLDG00000006440	-	72	57.353	ENSPPRG00000012498	-	50	57.353	Panthera_pardus
ENSSLDG00000006440	-	86	74.390	ENSPPRG00000012962	-	57	74.390	Panthera_pardus
ENSSLDG00000006440	-	86	74.390	ENSPTIG00000011191	-	57	74.390	Panthera_tigris_altaica
ENSSLDG00000006440	-	88	50.000	ENSPTRG00000043492	-	55	50.000	Pan_troglodytes
ENSSLDG00000006440	-	100	49.474	ENSPTRG00000043676	-	63	49.474	Pan_troglodytes
ENSSLDG00000006440	-	86	74.390	ENSPTRG00000011505	RPL28	63	82.857	Pan_troglodytes
ENSSLDG00000006440	-	86	74.390	ENSPANG00000029716	RPL28	99	83.824	Papio_anubis
ENSSLDG00000006440	-	74	90.000	ENSPKIG00000014698	rpl28	51	90.000	Paramormyrops_kingsleyae
ENSSLDG00000006440	-	75	92.958	ENSPMGG00000004586	rpl28	52	92.958	Periophthalmus_magnuspinnatus
ENSSLDG00000006440	-	86	67.073	ENSPEMG00000013352	-	57	67.073	Peromyscus_maniculatus_bairdii
ENSSLDG00000006440	-	86	74.390	ENSPEMG00000011755	Rpl28	57	74.390	Peromyscus_maniculatus_bairdii
ENSSLDG00000006440	-	86	65.854	ENSPMAG00000008617	rpl28	56	65.854	Petromyzon_marinus
ENSSLDG00000006440	-	75	63.380	ENSPCIG00000019415	-	72	63.380	Phascolarctos_cinereus
ENSSLDG00000006440	-	83	67.089	ENSPCIG00000018601	-	56	67.089	Phascolarctos_cinereus
ENSSLDG00000006440	-	86	84.146	ENSPFOG00000002206	rpl28	57	84.146	Poecilia_formosa
ENSSLDG00000006440	-	86	84.146	ENSPLAG00000003206	rpl28	57	84.146	Poecilia_latipinna
ENSSLDG00000006440	-	86	84.146	ENSPMEG00000000595	rpl28	57	84.146	Poecilia_mexicana
ENSSLDG00000006440	-	86	84.146	ENSPREG00000002015	rpl28	57	84.146	Poecilia_reticulata
ENSSLDG00000006440	-	86	74.390	ENSPPYG00000010417	-	57	74.390	Pongo_abelii
ENSSLDG00000006440	-	75	60.563	ENSPPYG00000029517	-	50	60.563	Pongo_abelii
ENSSLDG00000006440	-	86	74.390	ENSPCOG00000017000	RPL28	99	83.824	Propithecus_coquereli
ENSSLDG00000006440	-	86	70.732	ENSPCOG00000007456	-	57	70.732	Propithecus_coquereli
ENSSLDG00000006440	-	86	63.415	ENSPCOG00000025957	-	56	63.415	Propithecus_coquereli
ENSSLDG00000006440	-	86	70.732	ENSPCOG00000014236	-	59	70.732	Propithecus_coquereli
ENSSLDG00000006440	-	74	80.000	ENSPVAG00000007315	RPL28	51	80.000	Pteropus_vampyrus
ENSSLDG00000006440	-	74	94.286	ENSPNYG00000004757	rpl28	51	94.286	Pundamilia_nyererei
ENSSLDG00000006440	-	86	74.390	ENSRNOG00000017127	Rpl28	57	74.390	Rattus_norvegicus
ENSSLDG00000006440	-	80	73.684	ENSRNOG00000061441	AABR07071935.1	55	73.684	Rattus_norvegicus
ENSSLDG00000006440	-	86	73.171	ENSRNOG00000009240	AABR07016623.1	54	73.171	Rattus_norvegicus
ENSSLDG00000006440	-	86	73.171	ENSRNOG00000037673	AABR07071891.2	57	73.171	Rattus_norvegicus
ENSSLDG00000006440	-	86	74.390	ENSRBIG00000034637	RPL28	99	83.824	Rhinopithecus_bieti
ENSSLDG00000006440	-	86	73.171	ENSRBIG00000003677	-	57	73.171	Rhinopithecus_bieti
ENSSLDG00000006440	-	86	74.390	ENSRROG00000028904	RPL28	99	83.824	Rhinopithecus_roxellana
ENSSLDG00000006440	-	85	58.025	ENSRROG00000030502	-	66	58.025	Rhinopithecus_roxellana
ENSSLDG00000006440	-	89	63.529	ENSSBOG00000022635	-	90	63.529	Saimiri_boliviensis_boliviensis
ENSSLDG00000006440	-	86	74.390	ENSSBOG00000028286	RPL28	99	83.824	Saimiri_boliviensis_boliviensis
ENSSLDG00000006440	-	74	90.000	ENSSFOG00015001292	rpl28	51	90.000	Scleropages_formosus
ENSSLDG00000006440	-	74	90.000	ENSSFOG00015012801	-	51	90.000	Scleropages_formosus
ENSSLDG00000006440	-	75	91.549	ENSSMAG00000008756	rpl28	52	91.549	Scophthalmus_maximus
ENSSLDG00000006440	-	75	95.775	ENSSDUG00000015127	rpl28	52	95.775	Seriola_dumerili
ENSSLDG00000006440	-	71	80.597	ENSSPUG00000010390	RPL28	50	80.597	Sphenodon_punctatus
ENSSLDG00000006440	-	86	74.390	ENSSSCG00000039460	-	57	74.390	Sus_scrofa
ENSSLDG00000006440	-	86	68.293	ENSSSCG00000038865	-	64	75.714	Sus_scrofa
ENSSLDG00000006440	-	74	94.286	ENSTRUG00000025383	rpl28	51	94.286	Takifugu_rubripes
ENSSLDG00000006440	-	73	94.203	ENSTNIG00000002577	rpl28	78	94.203	Tetraodon_nigroviridis
ENSSLDG00000006440	-	86	74.390	ENSTTRG00000002428	RPL28	57	74.390	Tursiops_truncatus
ENSSLDG00000006440	-	75	60.563	ENSUAMG00000003339	-	52	60.563	Ursus_americanus
ENSSLDG00000006440	-	86	74.390	ENSUAMG00000017635	RPL28	57	74.390	Ursus_americanus
ENSSLDG00000006440	-	85	54.321	ENSUAMG00000002452	-	56	54.321	Ursus_americanus
ENSSLDG00000006440	-	85	72.840	ENSXETG00000000132	rpl28	56	72.840	Xenopus_tropicalis
ENSSLDG00000006440	-	80	88.158	ENSXCOG00000001554	rpl28	55	88.158	Xiphophorus_couchianus
ENSSLDG00000006440	-	80	88.158	ENSXMAG00000005190	rpl28	55	88.158	Xiphophorus_maculatus