EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000006494 (Gene tree)
Gene ID: -
Gene Symbol: tufm
Alias: fi06f04|wu:fi06f04|zgc:110766
Full Name: Tu translation elongation factor%2C mitochondrial
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 9480 bases
Position: chrPEQF01094425.1:110214-119693
Accession: 111649079
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000008200	GTP_EFTU	PF00009.27	1.5e-55	1	1
ENSSLDP00000008189	GTP_EFTU	PF00009.27	1.5e-55	1	1
ENSSLDP00000008200	GTP_EFTU_D2	PF03144.25	3.6e-14	1	1
ENSSLDP00000008189	GTP_EFTU_D2	PF03144.25	3.7e-14	1	1
ENSSLDP00000008200	GTP_EFTU_D3	PF03143.17	6.5e-26	1	1
ENSSLDP00000008189	GTP_EFTU_D3	PF03143.17	6.7e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000008466	-	1329	-	ENSSLDP00000008200	442 (aa)	-	-
ENSSLDT00000008455	-	4172	XM_023398818	ENSSLDP00000008189	446 (aa)	XP_023254586	UPI000C6F9AC6

Gene Model

Click here to download ENSSLDG00000006494's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000006494's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000006494	tufm	88	30.531	ENSSLDG00000019156	-	95	30.531
ENSSLDG00000006494	tufm	88	30.872	ENSSLDG00000023761	si:dkey-37o8.1	96	30.872
ENSSLDG00000006494	tufm	88	30.357	ENSSLDG00000006378	eef1a1b	95	30.357
ENSSLDG00000006494	tufm	88	30.580	ENSSLDG00000017189	EEF1A1	95	30.580

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000006494	tufm	93	78.155	ENSG00000178952	TUFM	92	77.751	Homo_sapiens
ENSSLDG00000006494	tufm	100	95.740	ENSAPOG00000013385	tufm	100	95.740	Acanthochromis_polyacanthus
ENSSLDG00000006494	tufm	94	78.417	ENSAMEG00000015551	TUFM	92	78.417	Ailuropoda_melanoleuca
ENSSLDG00000006494	tufm	95	93.301	ENSACIG00000007388	tufm	97	92.874	Amphilophus_citrinellus
ENSSLDG00000006494	tufm	100	95.291	ENSAOCG00000001032	tufm	100	95.291	Amphiprion_ocellaris
ENSSLDG00000006494	tufm	100	95.291	ENSAPEG00000015751	tufm	100	95.291	Amphiprion_percula
ENSSLDG00000006494	tufm	100	93.049	ENSATEG00000002905	tufm	97	93.049	Anabas_testudineus
ENSSLDG00000006494	tufm	99	75.446	ENSACAG00000005399	TUFM	89	80.244	Anolis_carolinensis
ENSSLDG00000006494	tufm	99	72.727	ENSANAG00000022206	TUFM	92	75.779	Aotus_nancymaae
ENSSLDG00000006494	tufm	100	94.843	ENSACLG00000007403	tufm	93	94.843	Astatotilapia_calliptera
ENSSLDG00000006494	tufm	99	74.945	ENSBTAG00000019216	TUFM	92	78.177	Bos_taurus
ENSSLDG00000006494	tufm	95	55.711	WBGene00007000	tufm-1	86	55.711	Caenorhabditis_elegans
ENSSLDG00000006494	tufm	99	73.171	ENSCJAG00000006236	TUFM	92	76.019	Callithrix_jacchus
ENSSLDG00000006494	tufm	99	75.388	ENSCAFG00000017216	TUFM	92	78.417	Canis_familiaris
ENSSLDG00000006494	tufm	99	75.388	ENSCAFG00020017574	TUFM	92	78.417	Canis_lupus_dingo
ENSSLDG00000006494	tufm	99	75.166	ENSCHIG00000020583	TUFM	94	77.541	Capra_hircus
ENSSLDG00000006494	tufm	100	75.664	ENSTSYG00000026053	TUFM	93	77.962	Carlito_syrichta
ENSSLDG00000006494	tufm	99	75.388	ENSCPOG00000010534	TUFM	92	78.657	Cavia_porcellus
ENSSLDG00000006494	tufm	99	72.949	ENSCCAG00000033296	TUFM	92	75.779	Cebus_capucinus
ENSSLDG00000006494	tufm	99	74.501	ENSCATG00000035822	TUFM	92	77.698	Cercocebus_atys
ENSSLDG00000006494	tufm	99	75.166	ENSCLAG00000013969	TUFM	92	78.417	Chinchilla_lanigera
ENSSLDG00000006494	tufm	99	73.614	ENSCSAG00000006314	TUFM	92	77.218	Chlorocebus_sabaeus
ENSSLDG00000006494	tufm	100	75.664	ENSCHOG00000009077	TUFM	92	78.947	Choloepus_hoffmanni
ENSSLDG00000006494	tufm	99	78.076	ENSCPBG00000003874	TUFM	91	81.190	Chrysemys_picta_bellii
ENSSLDG00000006494	tufm	91	59.158	ENSCING00000002841	-	94	59.158	Ciona_intestinalis
ENSSLDG00000006494	tufm	90	59.750	ENSCSAVG00000009380	-	86	59.750	Ciona_savignyi
ENSSLDG00000006494	tufm	100	74.058	ENSCANG00000035829	TUFM	92	77.273	Colobus_angolensis_palliatus
ENSSLDG00000006494	tufm	99	74.279	ENSCGRG00001022949	Tufm	92	77.458	Cricetulus_griseus_chok1gshd
ENSSLDG00000006494	tufm	99	74.279	ENSCGRG00000001868	-	92	77.458	Cricetulus_griseus_crigri
ENSSLDG00000006494	tufm	93	54.348	ENSCGRG00000013193	-	91	54.348	Cricetulus_griseus_crigri
ENSSLDG00000006494	tufm	100	88.117	ENSCSEG00000013841	tufm	100	88.117	Cynoglossus_semilaevis
ENSSLDG00000006494	tufm	100	95.516	ENSCVAG00000006251	tufm	100	95.516	Cyprinodon_variegatus
ENSSLDG00000006494	tufm	100	84.978	ENSDARG00000104173	tufm	99	84.978	Danio_rerio
ENSSLDG00000006494	tufm	100	73.673	ENSDNOG00000047636	TUFM	92	76.794	Dasypus_novemcinctus
ENSSLDG00000006494	tufm	94	63.507	ENSDORG00000023544	-	98	64.286	Dipodomys_ordii
ENSSLDG00000006494	tufm	90	69.750	FBgn0024556	mEFTu1	81	69.750	Drosophila_melanogaster
ENSSLDG00000006494	tufm	80	65.634	ENSETEG00000009601	TUFM	89	65.634	Echinops_telfairi
ENSSLDG00000006494	tufm	90	73.750	ENSEBUG00000015907	tufm	66	74.000	Eptatretus_burgeri
ENSSLDG00000006494	tufm	99	75.778	ENSEASG00005015477	TUFM	91	79.075	Equus_asinus_asinus
ENSSLDG00000006494	tufm	99	75.778	ENSECAG00000019763	TUFM	91	79.075	Equus_caballus
ENSSLDG00000006494	tufm	87	73.165	ENSEEUG00000001402	TUFM	94	73.947	Erinaceus_europaeus
ENSSLDG00000006494	tufm	100	89.509	ENSELUG00000013410	tufm	96	89.509	Esox_lucius
ENSSLDG00000006494	tufm	94	78.177	ENSFCAG00000003103	TUFM	60	78.177	Felis_catus
ENSSLDG00000006494	tufm	90	73.869	ENSFDAG00000010881	TUFM	99	74.921	Fukomys_damarensis
ENSSLDG00000006494	tufm	98	84.404	ENSFHEG00000020646	tufm	100	82.444	Fundulus_heteroclitus
ENSSLDG00000006494	tufm	100	89.910	ENSGMOG00000014616	tufm	100	89.910	Gadus_morhua
ENSSLDG00000006494	tufm	100	93.946	ENSGAFG00000004682	tufm	100	93.946	Gambusia_affinis
ENSSLDG00000006494	tufm	100	91.256	ENSGACG00000012961	tufm	100	91.256	Gasterosteus_aculeatus
ENSSLDG00000006494	tufm	99	78.864	ENSGAGG00000006132	TUFM	99	81.638	Gopherus_agassizii
ENSSLDG00000006494	tufm	93	78.155	ENSGGOG00000014136	TUFM	92	77.751	Gorilla_gorilla
ENSSLDG00000006494	tufm	100	95.291	ENSHBUG00000019031	tufm	93	95.291	Haplochromis_burtoni
ENSSLDG00000006494	tufm	100	73.230	ENSHGLG00000006613	TUFM	97	74.099	Heterocephalus_glaber_female
ENSSLDG00000006494	tufm	99	70.495	ENSHGLG00100004096	TUFM	97	70.495	Heterocephalus_glaber_male
ENSSLDG00000006494	tufm	99	91.910	ENSHCOG00000014418	tufm	99	91.910	Hippocampus_comes
ENSSLDG00000006494	tufm	100	86.323	ENSIPUG00000022457	tufm	100	86.323	Ictalurus_punctatus
ENSSLDG00000006494	tufm	95	46.101	ENSIPUG00000020682	-	91	54.403	Ictalurus_punctatus
ENSSLDG00000006494	tufm	99	75.388	ENSSTOG00000011837	TUFM	92	78.657	Ictidomys_tridecemlineatus
ENSSLDG00000006494	tufm	99	74.165	ENSJJAG00000011840	Tufm	92	77.885	Jaculus_jaculus
ENSSLDG00000006494	tufm	100	89.910	ENSKMAG00000009794	tufm	100	89.910	Kryptolebias_marmoratus
ENSSLDG00000006494	tufm	100	91.256	ENSLBEG00000023735	tufm	100	91.256	Labrus_bergylta
ENSSLDG00000006494	tufm	99	78.808	ENSLACG00000008242	TUFM	91	83.575	Latimeria_chalumnae
ENSSLDG00000006494	tufm	99	71.973	ENSLAFG00000028911	TUFM	92	74.880	Loxodonta_africana
ENSSLDG00000006494	tufm	100	74.558	ENSMFAG00000033739	TUFM	92	77.751	Macaca_fascicularis
ENSSLDG00000006494	tufm	100	74.558	ENSMMUG00000003303	TUFM	92	77.751	Macaca_mulatta
ENSSLDG00000006494	tufm	100	74.558	ENSMNEG00000006031	TUFM	92	77.751	Macaca_nemestrina
ENSSLDG00000006494	tufm	99	74.501	ENSMLEG00000042133	TUFM	92	77.698	Mandrillus_leucophaeus
ENSSLDG00000006494	tufm	100	93.274	ENSMAMG00000002053	tufm	100	93.274	Mastacembelus_armatus
ENSSLDG00000006494	tufm	100	95.067	ENSMZEG00005010857	tufm	93	95.067	Maylandia_zebra
ENSSLDG00000006494	tufm	99	74.945	ENSMAUG00000010490	Tufm	92	78.177	Mesocricetus_auratus
ENSSLDG00000006494	tufm	99	74.279	ENSMICG00000007650	TUFM	92	77.698	Microcebus_murinus
ENSSLDG00000006494	tufm	99	74.501	ENSMOCG00000010051	Tufm	92	77.458	Microtus_ochrogaster
ENSSLDG00000006494	tufm	95	92.823	ENSMMOG00000012344	tufm	93	92.823	Mola_mola
ENSSLDG00000006494	tufm	97	77.083	ENSMODG00000015564	TUFM	92	78.897	Monodelphis_domestica
ENSSLDG00000006494	tufm	100	90.135	ENSMALG00000020254	tufm	100	90.135	Monopterus_albus
ENSSLDG00000006494	tufm	99	75.854	MGP_CAROLIEiJ_G0030449	-	96	75.854	Mus_caroli
ENSSLDG00000006494	tufm	99	75.854	MGP_CAROLIEiJ_G0030448	-	98	80.702	Mus_caroli
ENSSLDG00000006494	tufm	99	75.854	ENSMUSG00000073838	Tufm	98	80.702	Mus_musculus
ENSSLDG00000006494	tufm	99	76.082	MGP_PahariEiJ_G0013658	-	98	80.702	Mus_pahari
ENSSLDG00000006494	tufm	99	76.082	MGP_PahariEiJ_G0013659	-	96	76.082	Mus_pahari
ENSSLDG00000006494	tufm	99	76.082	MGP_SPRETEiJ_G0031562	-	98	81.579	Mus_spretus
ENSSLDG00000006494	tufm	98	70.402	MGP_SPRETEiJ_G0031563	-	96	70.402	Mus_spretus
ENSSLDG00000006494	tufm	82	78.297	ENSMPUG00000012816	TUFM	98	78.108	Mustela_putorius_furo
ENSSLDG00000006494	tufm	99	74.279	ENSMLUG00000012335	-	92	77.698	Myotis_lucifugus
ENSSLDG00000006494	tufm	99	74.945	ENSNGAG00000008610	Tufm	92	78.417	Nannospalax_galili
ENSSLDG00000006494	tufm	83	94.247	ENSNBRG00000006466	tufm	96	94.751	Neolamprologus_brichardi
ENSSLDG00000006494	tufm	100	69.757	ENSNLEG00000011063	TUFM	92	72.554	Nomascus_leucogenys
ENSSLDG00000006494	tufm	79	80.115	ENSMEUG00000011131	TUFM	100	80.115	Notamacropus_eugenii
ENSSLDG00000006494	tufm	99	65.376	ENSOPRG00000002318	-	95	65.376	Ochotona_princeps
ENSSLDG00000006494	tufm	100	95.291	ENSONIG00000019389	tufm	100	95.291	Oreochromis_niloticus
ENSSLDG00000006494	tufm	94	80.482	ENSOANG00000013114	TUFM	95	80.482	Ornithorhynchus_anatinus
ENSSLDG00000006494	tufm	94	78.657	ENSOCUG00000002683	TUFM	91	78.657	Oryctolagus_cuniculus
ENSSLDG00000006494	tufm	100	94.843	ENSORLG00000011497	tufm	100	94.843	Oryzias_latipes
ENSSLDG00000006494	tufm	100	95.291	ENSORLG00020013437	tufm	100	95.291	Oryzias_latipes_hni
ENSSLDG00000006494	tufm	100	95.067	ENSORLG00015003107	tufm	100	95.067	Oryzias_latipes_hsok
ENSSLDG00000006494	tufm	100	95.291	ENSOMEG00000016958	tufm	100	95.291	Oryzias_melastigma
ENSSLDG00000006494	tufm	99	74.279	ENSOGAG00000006875	TUFM	93	76.960	Otolemur_garnettii
ENSSLDG00000006494	tufm	91	79.353	ENSOARG00000002357	TUFM	97	79.353	Ovis_aries
ENSSLDG00000006494	tufm	93	78.155	ENSPPAG00000035168	TUFM	92	77.751	Pan_paniscus
ENSSLDG00000006494	tufm	94	78.177	ENSPPRG00000014248	TUFM	92	78.177	Panthera_pardus
ENSSLDG00000006494	tufm	94	77.938	ENSPTIG00000009980	TUFM	98	77.938	Panthera_tigris_altaica
ENSSLDG00000006494	tufm	93	78.155	ENSPTRG00000007939	TUFM	92	77.751	Pan_troglodytes
ENSSLDG00000006494	tufm	100	74.336	ENSPANG00000019624	TUFM	92	77.512	Papio_anubis
ENSSLDG00000006494	tufm	100	84.598	ENSPKIG00000023809	tufm	98	82.812	Paramormyrops_kingsleyae
ENSSLDG00000006494	tufm	71	79.048	ENSPSIG00000005302	TUFM	100	79.048	Pelodiscus_sinensis
ENSSLDG00000006494	tufm	95	92.344	ENSPMGG00000015631	tufm	99	92.344	Periophthalmus_magnuspinnatus
ENSSLDG00000006494	tufm	99	74.501	ENSPEMG00000012208	Tufm	92	77.458	Peromyscus_maniculatus_bairdii
ENSSLDG00000006494	tufm	99	74.066	ENSPCIG00000025208	TUFM	96	75.286	Phascolarctos_cinereus
ENSSLDG00000006494	tufm	100	91.256	ENSPFOG00000007043	tufm	100	91.256	Poecilia_formosa
ENSSLDG00000006494	tufm	98	88.761	ENSPLAG00000014372	tufm	99	87.727	Poecilia_latipinna
ENSSLDG00000006494	tufm	100	89.286	ENSPMEG00000014520	-	100	89.238	Poecilia_mexicana
ENSSLDG00000006494	tufm	100	91.480	ENSPMEG00000019508	tufm	100	91.480	Poecilia_mexicana
ENSSLDG00000006494	tufm	100	91.928	ENSPREG00000013913	tufm	100	91.928	Poecilia_reticulata
ENSSLDG00000006494	tufm	99	74.058	ENSPPYG00000007226	TUFM	92	77.218	Pongo_abelii
ENSSLDG00000006494	tufm	96	71.765	ENSPCAG00000015294	TUFM	93	72.038	Procavia_capensis
ENSSLDG00000006494	tufm	99	73.836	ENSPCOG00000012267	TUFM	92	77.218	Propithecus_coquereli
ENSSLDG00000006494	tufm	99	95.495	ENSPNYG00000008905	tufm	100	95.495	Pundamilia_nyererei
ENSSLDG00000006494	tufm	100	89.686	ENSPNAG00000018881	tufm	100	89.686	Pygocentrus_nattereri
ENSSLDG00000006494	tufm	99	76.082	ENSRNOG00000018604	Tufm	96	76.082	Rattus_norvegicus
ENSSLDG00000006494	tufm	96	73.333	ENSRBIG00000042008	-	90	76.617	Rhinopithecus_bieti
ENSSLDG00000006494	tufm	58	76.654	ENSRBIG00000036713	-	94	76.654	Rhinopithecus_bieti
ENSSLDG00000006494	tufm	67	70.861	ENSRROG00000044977	-	73	75.836	Rhinopithecus_roxellana
ENSSLDG00000006494	tufm	100	74.501	ENSRROG00000036858	-	92	77.751	Rhinopithecus_roxellana
ENSSLDG00000006494	tufm	98	58.182	YOR187W	TUF1	95	60.287	Saccharomyces_cerevisiae
ENSSLDG00000006494	tufm	98	74.260	ENSSBOG00000026542	TUFM	94	75.650	Saimiri_boliviensis_boliviensis
ENSSLDG00000006494	tufm	98	77.064	ENSSHAG00000012121	TUFM	97	79.187	Sarcophilus_harrisii
ENSSLDG00000006494	tufm	100	85.268	ENSSFOG00015013352	tufm	100	84.152	Scleropages_formosus
ENSSLDG00000006494	tufm	100	94.395	ENSSMAG00000010053	tufm	100	94.395	Scophthalmus_maximus
ENSSLDG00000006494	tufm	100	99.327	ENSSDUG00000016896	tufm	100	99.327	Seriola_dumerili
ENSSLDG00000006494	tufm	85	76.053	ENSSARG00000011228	TUFM	96	78.022	Sorex_araneus
ENSSLDG00000006494	tufm	96	70.233	ENSSPUG00000016312	TUFM	96	71.292	Sphenodon_punctatus
ENSSLDG00000006494	tufm	100	92.825	ENSSPAG00000009936	tufm	99	92.825	Stegastes_partitus
ENSSLDG00000006494	tufm	99	75.166	ENSSSCG00000007803	TUFM	92	78.177	Sus_scrofa
ENSSLDG00000006494	tufm	100	91.256	ENSTRUG00000008300	tufm	100	91.256	Takifugu_rubripes
ENSSLDG00000006494	tufm	99	71.806	ENSTBEG00000015029	TUFM	91	76.019	Tupaia_belangeri
ENSSLDG00000006494	tufm	62	78.182	ENSTTRG00000001980	-	100	78.182	Tursiops_truncatus
ENSSLDG00000006494	tufm	58	77.432	ENSTTRG00000005930	-	57	77.432	Tursiops_truncatus
ENSSLDG00000006494	tufm	100	75.000	ENSUAMG00000001471	TUFM	92	77.672	Ursus_americanus
ENSSLDG00000006494	tufm	92	79.557	ENSUMAG00000009341	TUFM	99	79.557	Ursus_maritimus
ENSSLDG00000006494	tufm	62	77.455	ENSVPAG00000009541	TUFM	100	77.455	Vicugna_pacos
ENSSLDG00000006494	tufm	99	75.388	ENSVVUG00000024170	TUFM	98	74.831	Vulpes_vulpes
ENSSLDG00000006494	tufm	85	53.704	ENSXETG00000028019	-	78	90.426	Xenopus_tropicalis
ENSSLDG00000006494	tufm	98	91.954	ENSXMAG00000011848	tufm	96	94.258	Xiphophorus_maculatus