EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000006506 (Gene tree)
Gene ID: -
Gene Symbol: prdm14
Alias: fc16b12|wu:fc16b12
Full Name: PR/SET domain 14
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 4511 bases
Position: chrPEQF01099049.1:1203866-1208376
Accession: 111663000
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000008226	zf-C2H2	PF00096.26	9.4e-21	1	2
ENSSLDP00000008226	zf-C2H2	PF00096.26	9.4e-21	2	2
ENSSLDP00000008226	zf-met	PF12874.7	4.1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000008493	-	1815	XM_023417062	ENSSLDP00000008226	604 (aa)	XP_023272830	UPI000C6F4C68

Gene Model

Click here to download ENSSLDG00000006506's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000006506's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000006506	prdm14	63	37.815	ENSSLDG00000004428	PRDM15	71	37.815
ENSSLDG00000006506	prdm14	55	33.673	ENSSLDG00000011849	-	78	33.673
ENSSLDG00000006506	prdm14	54	36.923	ENSSLDG00000013353	prdm5	95	35.754
ENSSLDG00000006506	prdm14	50	40.476	ENSSLDG00000009557	prdm12b	63	40.476
ENSSLDG00000006506	prdm14	50	38.934	ENSSLDG00000013562	-	64	38.934

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000006506	prdm14	100	75.122	ENSACIG00000022698	prdm14	100	78.049	Amphilophus_citrinellus
ENSSLDG00000006506	prdm14	100	75.447	ENSACLG00000025407	prdm14	100	79.479	Astatotilapia_calliptera
ENSSLDG00000006506	prdm14	65	71.835	ENSAMXG00000000512	prdm14	77	71.835	Astyanax_mexicanus
ENSSLDG00000006506	prdm14	89	51.504	ENSBTAG00000000060	PRDM14	67	65.617	Bos_taurus
ENSSLDG00000006506	prdm14	89	50.441	ENSCHIG00000009297	PRDM14	67	65.274	Capra_hircus
ENSSLDG00000006506	prdm14	75	63.342	ENSTSYG00000010610	PRDM14	91	65.617	Carlito_syrichta
ENSSLDG00000006506	prdm14	63	64.987	ENSCPOG00000027176	PRDM14	73	64.987	Cavia_porcellus
ENSSLDG00000006506	prdm14	63	56.510	ENSCCAG00000026032	PRDM14	65	58.594	Cebus_capucinus
ENSSLDG00000006506	prdm14	90	49.479	ENSCLAG00000001937	PRDM14	66	62.850	Chinchilla_lanigera
ENSSLDG00000006506	prdm14	83	73.611	ENSGACG00000002829	prdm14	100	73.413	Gasterosteus_aculeatus
ENSSLDG00000006506	prdm14	100	85.099	ENSHBUG00000019660	prdm14	100	85.430	Haplochromis_burtoni
ENSSLDG00000006506	prdm14	100	85.927	ENSMZEG00005021597	prdm14	100	85.927	Maylandia_zebra
ENSSLDG00000006506	prdm14	100	85.596	ENSNBRG00000023669	prdm14	100	85.596	Neolamprologus_brichardi
ENSSLDG00000006506	prdm14	87	52.022	ENSODEG00000003245	PRDM14	95	51.654	Octodon_degus
ENSSLDG00000006506	prdm14	69	61.446	ENSOARG00000003528	PRDM14	77	65.013	Ovis_aries
ENSSLDG00000006506	prdm14	100	84.603	ENSPNYG00000001938	prdm14	100	84.934	Pundamilia_nyererei
ENSSLDG00000006506	prdm14	100	98.675	ENSSDUG00000013311	prdm14	100	98.675	Seriola_dumerili
ENSSLDG00000006506	prdm14	63	86.595	ENSTNIG00000008194	prdm14	99	86.595	Tetraodon_nigroviridis