EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000006678 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: exosome complex component RRP41-like
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 1037 bases
Position: chrPEQF01080325.1:165-1201
Accession: 111647729
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000008427	RNase_PH	PF01138.21	2.3e-19	1	1
ENSSLDP00000008427	RNase_PH_C	PF03725.15	5.1e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000008700	-	591	XM_023397380	ENSSLDP00000008427	196 (aa)	XP_023253148	-

Gene Model

Click here to download ENSSLDG00000006678's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000006678's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000006678	-	79	32.099	ENSSLDG00000017776	exosc6	58	32.099
ENSSLDG00000006678	-	97	97.368	ENSSLDG00000008003	exosc4	78	97.368

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000006678	-	95	69.355	ENSG00000178896	EXOSC4	76	69.355	Homo_sapiens
ENSSLDG00000006678	-	97	95.263	ENSAPOG00000000255	exosc4	78	95.263	Acanthochromis_polyacanthus
ENSSLDG00000006678	-	95	69.892	ENSAMEG00000006093	EXOSC4	76	69.892	Ailuropoda_melanoleuca
ENSSLDG00000006678	-	97	96.316	ENSACIG00000017924	exosc4	78	96.316	Amphilophus_citrinellus
ENSSLDG00000006678	-	97	96.316	ENSAOCG00000005105	exosc4	78	96.316	Amphiprion_ocellaris
ENSSLDG00000006678	-	97	96.316	ENSAPEG00000003972	exosc4	78	96.316	Amphiprion_percula
ENSSLDG00000006678	-	94	99.459	ENSATEG00000007766	exosc4	76	99.459	Anabas_testudineus
ENSSLDG00000006678	-	97	69.634	ENSACAG00000004017	EXOSC4	100	69.634	Anolis_carolinensis
ENSSLDG00000006678	-	95	69.355	ENSANAG00000026123	EXOSC4	76	69.355	Aotus_nancymaae
ENSSLDG00000006678	-	97	96.316	ENSACLG00000020071	exosc4	78	96.316	Astatotilapia_calliptera
ENSSLDG00000006678	-	94	87.568	ENSAMXG00000030867	exosc4	76	87.568	Astyanax_mexicanus
ENSSLDG00000006678	-	95	70.968	ENSBTAG00000014607	EXOSC4	76	70.968	Bos_taurus
ENSSLDG00000006678	-	97	40.838	WBGene00007201	exos-4.1	80	40.838	Caenorhabditis_elegans
ENSSLDG00000006678	-	95	69.355	ENSCJAG00000021458	EXOSC4	76	69.355	Callithrix_jacchus
ENSSLDG00000006678	-	95	70.430	ENSCAFG00000001521	EXOSC4	76	70.430	Canis_familiaris
ENSSLDG00000006678	-	95	70.430	ENSCAFG00020018820	EXOSC4	76	70.430	Canis_lupus_dingo
ENSSLDG00000006678	-	95	71.505	ENSCHIG00000021121	EXOSC4	76	71.505	Capra_hircus
ENSSLDG00000006678	-	95	69.892	ENSTSYG00000029697	EXOSC4	76	69.892	Carlito_syrichta
ENSSLDG00000006678	-	100	65.854	ENSCAPG00000017958	EXOSC4	94	65.854	Cavia_aperea
ENSSLDG00000006678	-	66	31.579	ENSCPOG00000037814	-	56	32.414	Cavia_porcellus
ENSSLDG00000006678	-	95	69.355	ENSCPOG00000022671	EXOSC4	76	69.355	Cavia_porcellus
ENSSLDG00000006678	-	95	69.355	ENSCCAG00000025515	EXOSC4	90	69.355	Cebus_capucinus
ENSSLDG00000006678	-	95	69.355	ENSCATG00000029965	EXOSC4	76	69.355	Cercocebus_atys
ENSSLDG00000006678	-	95	69.355	ENSCLAG00000014676	EXOSC4	76	69.355	Chinchilla_lanigera
ENSSLDG00000006678	-	95	69.355	ENSCSAG00000008802	EXOSC4	76	69.355	Chlorocebus_sabaeus
ENSSLDG00000006678	-	97	71.579	ENSCPBG00000018860	EXOSC4	78	71.579	Chrysemys_picta_bellii
ENSSLDG00000006678	-	86	53.571	ENSCING00000009562	-	68	53.571	Ciona_intestinalis
ENSSLDG00000006678	-	91	49.721	ENSCSAVG00000008006	-	72	49.721	Ciona_savignyi
ENSSLDG00000006678	-	86	30.978	ENSCSAVG00000002563	-	65	30.978	Ciona_savignyi
ENSSLDG00000006678	-	95	69.355	ENSCANG00000035733	EXOSC4	76	69.355	Colobus_angolensis_palliatus
ENSSLDG00000006678	-	95	69.355	ENSCGRG00001020452	Exosc4	76	69.355	Cricetulus_griseus_chok1gshd
ENSSLDG00000006678	-	95	69.355	ENSCGRG00000016505	Exosc4	76	69.355	Cricetulus_griseus_crigri
ENSSLDG00000006678	-	97	95.263	ENSCSEG00000010906	exosc4	78	95.263	Cynoglossus_semilaevis
ENSSLDG00000006678	-	94	96.216	ENSCVAG00000006625	exosc4	76	96.216	Cyprinodon_variegatus
ENSSLDG00000006678	-	84	31.818	ENSCVAG00000021030	exosc6	87	31.818	Cyprinodon_variegatus
ENSSLDG00000006678	-	84	31.818	ENSCVAG00000021002	EXOSC6	88	31.818	Cyprinodon_variegatus
ENSSLDG00000006678	-	92	85.556	ENSDARG00000103432	exosc4	75	85.556	Danio_rerio
ENSSLDG00000006678	-	95	68.817	ENSDNOG00000009800	EXOSC4	76	68.817	Dasypus_novemcinctus
ENSSLDG00000006678	-	95	69.355	ENSDORG00000008461	Exosc4	76	69.355	Dipodomys_ordii
ENSSLDG00000006678	-	85	54.167	FBgn0032487	Ski6	68	54.167	Drosophila_melanogaster
ENSSLDG00000006678	-	92	68.333	ENSEBUG00000014277	exosc4	74	68.333	Eptatretus_burgeri
ENSSLDG00000006678	-	95	69.355	ENSEASG00005010166	EXOSC4	76	69.355	Equus_asinus_asinus
ENSSLDG00000006678	-	95	69.355	ENSECAG00000013658	EXOSC4	76	69.355	Equus_caballus
ENSSLDG00000006678	-	82	30.769	ENSELUG00000015515	exosc6	61	30.769	Esox_lucius
ENSSLDG00000006678	-	94	93.514	ENSELUG00000021011	exosc4	76	93.514	Esox_lucius
ENSSLDG00000006678	-	95	68.817	ENSFCAG00000034465	EXOSC4	76	68.817	Felis_catus
ENSSLDG00000006678	-	95	69.355	ENSFDAG00000006708	EXOSC4	76	69.355	Fukomys_damarensis
ENSSLDG00000006678	-	97	91.579	ENSFHEG00000013533	exosc4	78	91.579	Fundulus_heteroclitus
ENSSLDG00000006678	-	79	30.247	ENSGMOG00000008151	exosc6	59	30.247	Gadus_morhua
ENSSLDG00000006678	-	97	91.053	ENSGMOG00000002113	exosc4	76	91.053	Gadus_morhua
ENSSLDG00000006678	-	97	93.684	ENSGAFG00000021407	exosc4	78	93.684	Gambusia_affinis
ENSSLDG00000006678	-	62	32.558	ENSGAFG00000015179	exosc6	50	33.083	Gambusia_affinis
ENSSLDG00000006678	-	95	93.548	ENSGACG00000017838	exosc4	74	93.548	Gasterosteus_aculeatus
ENSSLDG00000006678	-	81	36.145	ENSGACG00000002690	exosc6	59	36.145	Gasterosteus_aculeatus
ENSSLDG00000006678	-	95	69.355	ENSGGOG00000040193	-	76	69.355	Gorilla_gorilla
ENSSLDG00000006678	-	95	69.355	ENSGGOG00000044212	-	76	69.355	Gorilla_gorilla
ENSSLDG00000006678	-	97	96.316	ENSHBUG00000006605	exosc4	78	96.316	Haplochromis_burtoni
ENSSLDG00000006678	-	95	69.892	ENSHGLG00000016299	EXOSC4	76	69.892	Heterocephalus_glaber_female
ENSSLDG00000006678	-	81	30.909	ENSHGLG00000021313	EXOSC6	58	30.864	Heterocephalus_glaber_female
ENSSLDG00000006678	-	95	69.892	ENSHGLG00100018786	EXOSC4	76	69.892	Heterocephalus_glaber_male
ENSSLDG00000006678	-	97	90.526	ENSHCOG00000018875	exosc4	74	90.526	Hippocampus_comes
ENSSLDG00000006678	-	81	30.061	ENSIPUG00000004761	exosc6	60	30.061	Ictalurus_punctatus
ENSSLDG00000006678	-	94	84.865	ENSIPUG00000011922	Exosc4	76	84.865	Ictalurus_punctatus
ENSSLDG00000006678	-	94	69.565	ENSSTOG00000002632	EXOSC4	75	69.565	Ictidomys_tridecemlineatus
ENSSLDG00000006678	-	95	69.892	ENSJJAG00000009655	Exosc4	76	69.892	Jaculus_jaculus
ENSSLDG00000006678	-	83	31.515	ENSKMAG00000009821	exosc6	61	31.515	Kryptolebias_marmoratus
ENSSLDG00000006678	-	97	94.211	ENSKMAG00000015373	exosc4	78	94.211	Kryptolebias_marmoratus
ENSSLDG00000006678	-	97	95.789	ENSLBEG00000012754	exosc4	78	95.789	Labrus_bergylta
ENSSLDG00000006678	-	79	31.481	ENSLBEG00000018680	exosc6	51	31.481	Labrus_bergylta
ENSSLDG00000006678	-	81	31.138	ENSLOCG00000017597	exosc6	60	31.737	Lepisosteus_oculatus
ENSSLDG00000006678	-	94	81.622	ENSLOCG00000008878	exosc4	75	81.622	Lepisosteus_oculatus
ENSSLDG00000006678	-	95	69.892	ENSLAFG00000030187	EXOSC4	76	69.892	Loxodonta_africana
ENSSLDG00000006678	-	95	69.355	ENSMFAG00000000161	EXOSC4	76	69.355	Macaca_fascicularis
ENSSLDG00000006678	-	86	30.409	ENSMFAG00000035562	EXOSC6	61	30.409	Macaca_fascicularis
ENSSLDG00000006678	-	95	69.355	ENSMMUG00000007160	EXOSC4	76	69.355	Macaca_mulatta
ENSSLDG00000006678	-	95	69.355	ENSMNEG00000033938	EXOSC4	76	69.355	Macaca_nemestrina
ENSSLDG00000006678	-	95	69.355	ENSMLEG00000041197	EXOSC4	76	69.355	Mandrillus_leucophaeus
ENSSLDG00000006678	-	95	97.326	ENSMAMG00000014749	exosc4	76	97.326	Mastacembelus_armatus
ENSSLDG00000006678	-	79	30.864	ENSMAMG00000016983	exosc6	59	30.864	Mastacembelus_armatus
ENSSLDG00000006678	-	97	96.316	ENSMZEG00005025086	exosc4	78	96.316	Maylandia_zebra
ENSSLDG00000006678	-	95	69.892	ENSMAUG00000007911	Exosc4	76	69.892	Mesocricetus_auratus
ENSSLDG00000006678	-	95	69.892	ENSMOCG00000020295	Exosc4	76	69.892	Microtus_ochrogaster
ENSSLDG00000006678	-	97	92.105	ENSMMOG00000016779	exosc4	78	92.105	Mola_mola
ENSSLDG00000006678	-	81	72.152	ENSMODG00000010435	EXOSC4	74	72.152	Monodelphis_domestica
ENSSLDG00000006678	-	97	94.211	ENSMALG00000020564	exosc4	78	94.211	Monopterus_albus
ENSSLDG00000006678	-	95	70.430	MGP_CAROLIEiJ_G0019919	Exosc4	76	70.430	Mus_caroli
ENSSLDG00000006678	-	95	70.430	ENSMUSG00000034259	Exosc4	76	70.430	Mus_musculus
ENSSLDG00000006678	-	95	69.892	MGP_PahariEiJ_G0019929	Exosc4	76	69.892	Mus_pahari
ENSSLDG00000006678	-	95	70.430	MGP_SPRETEiJ_G0020822	Exosc4	76	70.430	Mus_spretus
ENSSLDG00000006678	-	94	69.730	ENSMPUG00000007260	EXOSC4	93	69.730	Mustela_putorius_furo
ENSSLDG00000006678	-	95	69.892	ENSNGAG00000022428	Exosc4	76	69.892	Nannospalax_galili
ENSSLDG00000006678	-	97	96.316	ENSNBRG00000012326	exosc4	78	96.316	Neolamprologus_brichardi
ENSSLDG00000006678	-	95	69.355	ENSNLEG00000010449	EXOSC4	76	69.355	Nomascus_leucogenys
ENSSLDG00000006678	-	97	67.895	ENSMEUG00000011002	EXOSC4	78	67.895	Notamacropus_eugenii
ENSSLDG00000006678	-	93	67.760	ENSOPRG00000016625	EXOSC4	98	67.760	Ochotona_princeps
ENSSLDG00000006678	-	81	30.247	ENSODEG00000020448	EXOSC6	58	30.247	Octodon_degus
ENSSLDG00000006678	-	95	69.892	ENSODEG00000013951	EXOSC4	76	69.892	Octodon_degus
ENSSLDG00000006678	-	97	96.842	ENSONIG00000009617	exosc4	78	96.842	Oreochromis_niloticus
ENSSLDG00000006678	-	94	69.022	ENSOANG00000014904	EXOSC4	75	69.022	Ornithorhynchus_anatinus
ENSSLDG00000006678	-	68	30.147	ENSOCUG00000011497	EXOSC5	57	30.147	Oryctolagus_cuniculus
ENSSLDG00000006678	-	95	69.892	ENSOCUG00000021243	EXOSC4	76	69.892	Oryctolagus_cuniculus
ENSSLDG00000006678	-	93	93.989	ENSORLG00000017295	exosc4	75	93.989	Oryzias_latipes
ENSSLDG00000006678	-	93	93.989	ENSORLG00020009788	exosc4	75	93.989	Oryzias_latipes_hni
ENSSLDG00000006678	-	79	30.000	ENSORLG00015007795	exosc6	58	30.000	Oryzias_latipes_hsok
ENSSLDG00000006678	-	93	93.443	ENSORLG00015009754	exosc4	75	93.443	Oryzias_latipes_hsok
ENSSLDG00000006678	-	93	95.055	ENSOMEG00000005800	exosc4	75	95.055	Oryzias_melastigma
ENSSLDG00000006678	-	79	30.000	ENSOMEG00000014317	exosc6	59	30.000	Oryzias_melastigma
ENSSLDG00000006678	-	95	69.355	ENSOGAG00000007411	EXOSC4	76	69.355	Otolemur_garnettii
ENSSLDG00000006678	-	95	71.505	ENSOARG00000015188	EXOSC4	75	71.505	Ovis_aries
ENSSLDG00000006678	-	95	69.355	ENSPPAG00000035746	EXOSC4	76	69.355	Pan_paniscus
ENSSLDG00000006678	-	95	68.817	ENSPPRG00000019782	EXOSC4	76	68.817	Panthera_pardus
ENSSLDG00000006678	-	94	69.189	ENSPTIG00000020006	EXOSC4	76	69.189	Panthera_tigris_altaica
ENSSLDG00000006678	-	95	69.355	ENSPTRG00000020677	EXOSC4	76	69.355	Pan_troglodytes
ENSSLDG00000006678	-	95	69.355	ENSPANG00000023276	EXOSC4	76	69.355	Papio_anubis
ENSSLDG00000006678	-	94	82.703	ENSPKIG00000018362	exosc4	76	82.703	Paramormyrops_kingsleyae
ENSSLDG00000006678	-	79	30.625	ENSPKIG00000022020	exosc6	58	30.625	Paramormyrops_kingsleyae
ENSSLDG00000006678	-	96	90.426	ENSPMGG00000019307	exosc4	77	90.426	Periophthalmus_magnuspinnatus
ENSSLDG00000006678	-	95	70.968	ENSPEMG00000017031	Exosc4	76	70.968	Peromyscus_maniculatus_bairdii
ENSSLDG00000006678	-	96	68.783	ENSPMAG00000001175	exosc4	77	68.783	Petromyzon_marinus
ENSSLDG00000006678	-	97	67.368	ENSPCIG00000009102	EXOSC4	78	67.368	Phascolarctos_cinereus
ENSSLDG00000006678	-	97	93.684	ENSPFOG00000015214	exosc4	78	93.684	Poecilia_formosa
ENSSLDG00000006678	-	97	93.684	ENSPLAG00000018751	exosc4	78	93.684	Poecilia_latipinna
ENSSLDG00000006678	-	97	93.684	ENSPMEG00000023116	exosc4	78	93.684	Poecilia_mexicana
ENSSLDG00000006678	-	73	31.126	ENSPREG00000019548	exosc6	55	31.126	Poecilia_reticulata
ENSSLDG00000006678	-	94	95.676	ENSPREG00000009632	exosc4	76	95.676	Poecilia_reticulata
ENSSLDG00000006678	-	95	68.817	ENSPPYG00000018959	EXOSC4	78	68.817	Pongo_abelii
ENSSLDG00000006678	-	81	30.864	ENSPCAG00000012874	EXOSC6	58	30.864	Procavia_capensis
ENSSLDG00000006678	-	95	69.355	ENSPCAG00000014920	EXOSC4	76	69.355	Procavia_capensis
ENSSLDG00000006678	-	95	69.355	ENSPCOG00000020992	EXOSC4	76	69.355	Propithecus_coquereli
ENSSLDG00000006678	-	95	69.892	ENSPVAG00000007100	EXOSC4	76	69.892	Pteropus_vampyrus
ENSSLDG00000006678	-	97	96.316	ENSPNYG00000014429	exosc4	78	96.316	Pundamilia_nyererei
ENSSLDG00000006678	-	94	87.027	ENSPNAG00000013750	exosc4	83	87.027	Pygocentrus_nattereri
ENSSLDG00000006678	-	95	69.892	ENSRNOG00000012348	Exosc4	76	69.892	Rattus_norvegicus
ENSSLDG00000006678	-	55	33.333	ENSRBIG00000003409	EXOSC6	54	30.667	Rhinopithecus_bieti
ENSSLDG00000006678	-	95	69.355	ENSRBIG00000038476	EXOSC4	76	69.355	Rhinopithecus_bieti
ENSSLDG00000006678	-	95	69.355	ENSRROG00000038556	EXOSC4	76	69.355	Rhinopithecus_roxellana
ENSSLDG00000006678	-	87	33.918	YGR195W	SKI6	69	33.918	Saccharomyces_cerevisiae
ENSSLDG00000006678	-	97	67.895	ENSSHAG00000005397	EXOSC4	78	67.895	Sarcophilus_harrisii
ENSSLDG00000006678	-	95	83.871	ENSSFOG00015004133	exosc4	76	83.871	Scleropages_formosus
ENSSLDG00000006678	-	94	98.378	ENSSMAG00000020020	exosc4	76	98.378	Scophthalmus_maximus
ENSSLDG00000006678	-	86	30.286	ENSSDUG00000021109	exosc6	64	30.286	Seriola_dumerili
ENSSLDG00000006678	-	97	96.842	ENSSDUG00000018966	exosc4	78	96.842	Seriola_dumerili
ENSSLDG00000006678	-	94	75.135	ENSSPUG00000009644	EXOSC4	91	75.135	Sphenodon_punctatus
ENSSLDG00000006678	-	97	95.263	ENSSPAG00000016707	exosc4	72	95.263	Stegastes_partitus
ENSSLDG00000006678	-	95	69.892	ENSSSCG00000005925	EXOSC4	76	69.892	Sus_scrofa
ENSSLDG00000006678	-	95	89.840	ENSTRUG00000025054	exosc4	76	89.840	Takifugu_rubripes
ENSSLDG00000006678	-	79	30.247	ENSTRUG00000023811	exosc6	51	30.247	Takifugu_rubripes
ENSSLDG00000006678	-	79	30.968	ENSTNIG00000004018	exosc6	60	30.968	Tetraodon_nigroviridis
ENSSLDG00000006678	-	95	91.444	ENSTNIG00000008519	exosc4	76	91.444	Tetraodon_nigroviridis
ENSSLDG00000006678	-	95	68.817	ENSTBEG00000000727	EXOSC4	99	68.817	Tupaia_belangeri
ENSSLDG00000006678	-	95	69.355	ENSUAMG00000020173	EXOSC4	76	69.355	Ursus_americanus
ENSSLDG00000006678	-	75	66.667	ENSUMAG00000020831	EXOSC4	100	66.667	Ursus_maritimus
ENSSLDG00000006678	-	95	70.430	ENSVVUG00000009675	EXOSC4	76	70.430	Vulpes_vulpes
ENSSLDG00000006678	-	94	73.514	ENSXETG00000004668	exosc4	96	73.514	Xenopus_tropicalis
ENSSLDG00000006678	-	97	93.158	ENSXCOG00000015017	exosc4	78	93.158	Xiphophorus_couchianus
ENSSLDG00000006678	-	97	93.158	ENSXMAG00000016287	exosc4	78	93.158	Xiphophorus_maculatus