EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000006807 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 462 bases
Position: chrPEQF01012886.1:1-462
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000008579	MMR_HSR1	PF01926.23	9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000008856	-	420	-	ENSSLDP00000008579	140 (aa)	-	-

Gene Model

Click here to download ENSSLDG00000006807's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000006807's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000006807	-	94	77.852	ENSSLDG00000014712	-	63	77.852

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000006807	-	91	64.957	ENSACIG00000010992	-	50	64.957	Amphilophus_citrinellus
ENSSLDG00000006807	-	96	67.164	ENSACIG00000008165	-	52	67.164	Amphilophus_citrinellus
ENSSLDG00000006807	-	96	66.418	ENSACIG00000023724	-	53	66.418	Amphilophus_citrinellus
ENSSLDG00000006807	-	100	64.744	ENSAOCG00000012267	-	57	64.744	Amphiprion_ocellaris
ENSSLDG00000006807	-	78	77.982	ENSAPEG00000002648	-	61	77.982	Amphiprion_percula
ENSSLDG00000006807	-	78	80.734	ENSATEG00000011733	-	57	69.853	Anabas_testudineus
ENSSLDG00000006807	-	85	71.429	ENSACLG00000008069	-	50	71.429	Astatotilapia_calliptera
ENSSLDG00000006807	-	87	73.770	ENSACLG00000017807	-	66	73.770	Astatotilapia_calliptera
ENSSLDG00000006807	-	95	40.845	ENSAMXG00000001283	-	55	40.845	Astyanax_mexicanus
ENSSLDG00000006807	-	77	58.333	ENSCPBG00000021939	-	53	58.333	Chrysemys_picta_bellii
ENSSLDG00000006807	-	86	52.500	ENSCPBG00000006680	-	61	52.500	Chrysemys_picta_bellii
ENSSLDG00000006807	-	99	56.579	ENSCVAG00000018094	-	64	56.579	Cyprinodon_variegatus
ENSSLDG00000006807	-	93	59.231	ENSFHEG00000008542	-	54	59.231	Fundulus_heteroclitus
ENSSLDG00000006807	-	78	76.147	ENSHBUG00000016080	-	52	76.147	Haplochromis_burtoni
ENSSLDG00000006807	-	78	68.807	ENSHBUG00000004969	-	64	68.807	Haplochromis_burtoni
ENSSLDG00000006807	-	77	55.556	ENSJJAG00000023378	-	58	56.410	Jaculus_jaculus
ENSSLDG00000006807	-	86	60.448	ENSLBEG00000005277	-	54	60.448	Labrus_bergylta
ENSSLDG00000006807	-	97	58.088	ENSLBEG00000014225	-	75	58.088	Labrus_bergylta
ENSSLDG00000006807	-	88	69.106	ENSLBEG00000014554	-	55	69.106	Labrus_bergylta
ENSSLDG00000006807	-	77	66.667	ENSMZEG00005027736	-	64	66.667	Maylandia_zebra
ENSSLDG00000006807	-	94	66.667	ENSMZEG00005027730	-	52	66.667	Maylandia_zebra
ENSSLDG00000006807	-	100	53.503	ENSMZEG00005027737	-	59	53.503	Maylandia_zebra
ENSSLDG00000006807	-	78	49.541	ENSMOCG00000002764	-	52	49.541	Microtus_ochrogaster
ENSSLDG00000006807	-	81	72.807	ENSMMOG00000018247	irgf3	54	65.385	Mola_mola
ENSSLDG00000006807	-	66	48.913	MGP_CAROLIEiJ_G0022304	-	56	48.913	Mus_caroli
ENSSLDG00000006807	-	84	47.863	ENSMUSG00000078920	Ifi47	59	47.863	Mus_musculus
ENSSLDG00000006807	-	76	59.434	ENSMUSG00000078922	Tgtp1	58	59.211	Mus_musculus
ENSSLDG00000006807	-	99	52.632	ENSMUSG00000069893	9930111J21Rik1	70	38.202	Mus_musculus
ENSSLDG00000006807	-	99	51.880	ENSMUSG00000069892	9930111J21Rik2	70	38.202	Mus_musculus
ENSSLDG00000006807	-	76	58.491	MGP_PahariEiJ_G0017404	-	58	57.895	Mus_pahari
ENSSLDG00000006807	-	76	50.467	MGP_SPRETEiJ_G0017099	9930111J21Rik2	58	50.467	Mus_spretus
ENSSLDG00000006807	-	79	75.676	ENSNBRG00000001731	-	54	75.676	Neolamprologus_brichardi
ENSSLDG00000006807	-	80	66.964	ENSNBRG00000012048	-	61	66.964	Neolamprologus_brichardi
ENSSLDG00000006807	-	86	70.833	ENSNBRG00000000314	-	50	70.833	Neolamprologus_brichardi
ENSSLDG00000006807	-	79	73.874	ENSNBRG00000008076	-	60	73.874	Neolamprologus_brichardi
ENSSLDG00000006807	-	88	64.602	ENSNBRG00000022072	-	52	64.602	Neolamprologus_brichardi
ENSSLDG00000006807	-	90	69.725	ENSNBRG00000008018	-	54	69.725	Neolamprologus_brichardi
ENSSLDG00000006807	-	79	72.072	ENSNBRG00000007782	-	51	72.072	Neolamprologus_brichardi
ENSSLDG00000006807	-	88	54.472	ENSPMGG00000023541	-	50	54.472	Periophthalmus_magnuspinnatus
ENSSLDG00000006807	-	100	55.634	ENSPREG00000004310	-	53	60.550	Poecilia_reticulata
ENSSLDG00000006807	-	93	74.312	ENSPNYG00000023728	-	52	74.312	Pundamilia_nyererei
ENSSLDG00000006807	-	90	69.048	ENSPNYG00000007188	-	51	69.048	Pundamilia_nyererei
ENSSLDG00000006807	-	87	71.311	ENSPNYG00000023680	-	64	71.311	Pundamilia_nyererei
ENSSLDG00000006807	-	86	61.667	ENSPNYG00000023816	-	64	61.667	Pundamilia_nyererei
ENSSLDG00000006807	-	87	51.639	ENSPNAG00000029024	-	52	51.639	Pygocentrus_nattereri
ENSSLDG00000006807	-	94	40.940	ENSPNAG00000023934	-	53	40.940	Pygocentrus_nattereri
ENSSLDG00000006807	-	91	50.394	ENSPNAG00000000207	-	56	55.000	Pygocentrus_nattereri
ENSSLDG00000006807	-	94	65.306	ENSSPAG00000001416	-	61	65.306	Stegastes_partitus
ENSSLDG00000006807	-	94	68.966	ENSSPAG00000007371	-	72	68.966	Stegastes_partitus
ENSSLDG00000006807	-	94	70.345	ENSTRUG00000005821	-	55	70.345	Takifugu_rubripes
ENSSLDG00000006807	-	94	69.655	ENSTRUG00000001895	-	67	69.655	Takifugu_rubripes
ENSSLDG00000006807	-	87	66.176	ENSTNIG00000000695	-	77	66.176	Tetraodon_nigroviridis