EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSLDG00000006836 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: AF4/FMR2 family member 1-like
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 17462 bases
Position: chrPEQF01098849.1:657494-674955
Accession: 111656821
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000008603	AF-4	PF05110.13	0	1	2
ENSSLDP00000008603	AF-4	PF05110.13	0	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000008884	-	3760	XM_023408698	ENSSLDP00000008603	1206 (aa)	XP_023264466	-

Gene Model

Click here to download ENSSLDG00000006836's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000006836's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000006836	-	52	56.452	ENSG00000144218	AFF3	96	40.102	Homo_sapiens
ENSSLDG00000006836	-	99	71.464	ENSAPOG00000002994	-	100	71.130	Acanthochromis_polyacanthus
ENSSLDG00000006836	-	69	81.818	ENSACIG00000021066	-	96	81.818	Amphilophus_citrinellus
ENSSLDG00000006836	-	99	72.218	ENSAOCG00000020283	-	100	72.552	Amphiprion_ocellaris
ENSSLDG00000006836	-	99	72.134	ENSAPEG00000018794	-	100	72.469	Amphiprion_percula
ENSSLDG00000006836	-	100	74.566	ENSATEG00000015552	-	100	74.319	Anabas_testudineus
ENSSLDG00000006836	-	99	63.743	ENSACLG00000002905	-	99	63.492	Astatotilapia_calliptera
ENSSLDG00000006836	-	57	39.490	ENSAMXG00000020137	aff4	71	39.241	Astyanax_mexicanus
ENSSLDG00000006836	-	62	53.846	ENSAMXG00000015641	-	68	62.051	Astyanax_mexicanus
ENSSLDG00000006836	-	50	45.600	ENSAMXG00000000387	aff2	57	46.000	Astyanax_mexicanus
ENSSLDG00000006836	-	52	52.459	ENSBTAG00000012449	AFF3	52	52.459	Bos_taurus
ENSSLDG00000006836	-	52	56.452	ENSCJAG00000010071	AFF3	52	56.452	Callithrix_jacchus
ENSSLDG00000006836	-	52	56.452	ENSCAFG00000023079	AFF3	52	56.452	Canis_familiaris
ENSSLDG00000006836	-	52	54.098	ENSCHIG00000026653	AFF3	53	54.098	Capra_hircus
ENSSLDG00000006836	-	52	57.377	ENSCAPG00000012999	AFF3	65	57.377	Cavia_aperea
ENSSLDG00000006836	-	52	57.377	ENSCPOG00000006346	AFF3	63	57.377	Cavia_porcellus
ENSSLDG00000006836	-	52	56.452	ENSCATG00000045196	AFF3	53	55.738	Cercocebus_atys
ENSSLDG00000006836	-	52	55.738	ENSCLAG00000017100	AFF3	64	55.738	Chinchilla_lanigera
ENSSLDG00000006836	-	69	34.532	ENSCPBG00000020831	AFF2	68	35.190	Chrysemys_picta_bellii
ENSSLDG00000006836	-	52	50.820	ENSCGRG00001014566	Aff3	53	50.820	Cricetulus_griseus_chok1gshd
ENSSLDG00000006836	-	68	35.610	ENSCGRG00001015769	Aff1	68	36.675	Cricetulus_griseus_chok1gshd
ENSSLDG00000006836	-	52	50.820	ENSCGRG00000003408	Aff3	61	51.613	Cricetulus_griseus_crigri
ENSSLDG00000006836	-	99	50.419	ENSCVAG00000015626	-	100	49.916	Cyprinodon_variegatus
ENSSLDG00000006836	-	52	42.146	ENSDARG00000052242	aff2	67	35.714	Danio_rerio
ENSSLDG00000006836	-	52	55.738	ENSECAG00000006249	AFF3	53	55.738	Equus_caballus
ENSSLDG00000006836	-	99	45.455	ENSELUG00000019953	-	94	52.113	Esox_lucius
ENSSLDG00000006836	-	57	41.234	ENSFALG00000005554	AFF1	50	47.651	Ficedula_albicollis
ENSSLDG00000006836	-	78	50.053	ENSFHEG00000003521	-	100	49.203	Fundulus_heteroclitus
ENSSLDG00000006836	-	64	32.976	ENSFHEG00000022097	aff2	51	59.091	Fundulus_heteroclitus
ENSSLDG00000006836	-	54	51.667	ENSGALG00000009168	AFF2	51	51.667	Gallus_gallus
ENSSLDG00000006836	-	96	66.667	ENSGACG00000016333	-	100	66.667	Gasterosteus_aculeatus
ENSSLDG00000006836	-	52	56.452	ENSGGOG00000034914	AFF3	53	55.738	Gorilla_gorilla
ENSSLDG00000006836	-	99	63.963	ENSHBUG00000005828	-	100	63.629	Haplochromis_burtoni
ENSSLDG00000006836	-	99	49.793	ENSHCOG00000000539	-	99	48.225	Hippocampus_comes
ENSSLDG00000006836	-	50	36.089	ENSIPUG00000015259	-	96	36.262	Ictalurus_punctatus
ENSSLDG00000006836	-	52	54.098	ENSSTOG00000012140	AFF3	57	54.839	Ictidomys_tridecemlineatus
ENSSLDG00000006836	-	50	38.365	ENSJJAG00000022877	Aff1	69	40.580	Jaculus_jaculus
ENSSLDG00000006836	-	52	54.098	ENSJJAG00000013155	Aff3	61	54.839	Jaculus_jaculus
ENSSLDG00000006836	-	99	61.802	ENSKMAG00000013113	-	91	80.488	Kryptolebias_marmoratus
ENSSLDG00000006836	-	99	69.942	ENSLBEG00000016928	-	100	69.276	Labrus_bergylta
ENSSLDG00000006836	-	89	39.093	ENSLOCG00000004025	AFF1	99	38.846	Lepisosteus_oculatus
ENSSLDG00000006836	-	52	55.738	ENSMFAG00000031640	AFF3	52	55.738	Macaca_fascicularis
ENSSLDG00000006836	-	100	71.487	ENSMAMG00000016189	-	100	71.893	Mastacembelus_armatus
ENSSLDG00000006836	-	99	63.826	ENSMZEG00005020442	-	99	63.576	Maylandia_zebra
ENSSLDG00000006836	-	52	56.452	ENSMICG00000016001	AFF3	52	55.738	Microcebus_murinus
ENSSLDG00000006836	-	100	72.076	ENSMALG00000002436	-	100	71.911	Monopterus_albus
ENSSLDG00000006836	-	52	54.098	MGP_CAROLIEiJ_G0014063	Aff3	53	54.098	Mus_caroli
ENSSLDG00000006836	-	70	35.922	MGP_CAROLIEiJ_G0027469	Aff1	65	62.687	Mus_caroli
ENSSLDG00000006836	-	52	54.098	ENSMUSG00000037138	Aff3	53	54.098	Mus_musculus
ENSSLDG00000006836	-	52	54.098	MGP_PahariEiJ_G0027310	Aff3	53	54.098	Mus_pahari
ENSSLDG00000006836	-	52	54.839	MGP_SPRETEiJ_G0014867	Aff3	53	54.098	Mus_spretus
ENSSLDG00000006836	-	52	55.738	ENSNGAG00000002408	Aff3	53	55.738	Nannospalax_galili
ENSSLDG00000006836	-	99	61.322	ENSONIG00000007636	-	100	61.241	Oreochromis_niloticus
ENSSLDG00000006836	-	55	41.176	ENSONIG00000015816	aff2	50	44.326	Oreochromis_niloticus
ENSSLDG00000006836	-	52	56.452	ENSOCUG00000009532	AFF3	52	56.452	Oryctolagus_cuniculus
ENSSLDG00000006836	-	71	62.637	ENSORLG00000006428	-	99	62.637	Oryzias_latipes
ENSSLDG00000006836	-	84	62.637	ENSORLG00020003991	-	99	62.637	Oryzias_latipes_hni
ENSSLDG00000006836	-	84	62.637	ENSORLG00015009287	-	99	62.637	Oryzias_latipes_hsok
ENSSLDG00000006836	-	83	68.889	ENSOMEG00000005799	-	100	68.889	Oryzias_melastigma
ENSSLDG00000006836	-	69	39.261	ENSOGAG00000009622	-	71	39.007	Otolemur_garnettii
ENSSLDG00000006836	-	52	56.452	ENSPPRG00000014330	AFF3	53	55.738	Panthera_pardus
ENSSLDG00000006836	-	68	38.929	ENSPTIG00000011838	AFF1	83	39.903	Panthera_tigris_altaica
ENSSLDG00000006836	-	52	56.452	ENSPTRG00000012281	AFF3	53	55.738	Pan_troglodytes
ENSSLDG00000006836	-	52	56.452	ENSPANG00000018693	AFF3	53	55.738	Papio_anubis
ENSSLDG00000006836	-	88	57.193	ENSPKIG00000007777	-	99	36.118	Paramormyrops_kingsleyae
ENSSLDG00000006836	-	54	49.624	ENSPKIG00000024325	AFF4	56	50.847	Paramormyrops_kingsleyae
ENSSLDG00000006836	-	69	39.860	ENSPSIG00000003759	AFF1	71	40.291	Pelodiscus_sinensis
ENSSLDG00000006836	-	62	43.590	ENSPCIG00000011395	AFF1	56	62.903	Phascolarctos_cinereus
ENSSLDG00000006836	-	99	54.364	ENSPFOG00000004581	-	100	52.789	Poecilia_formosa
ENSSLDG00000006836	-	94	53.415	ENSPLAG00000012910	-	100	51.754	Poecilia_latipinna
ENSSLDG00000006836	-	54	56.140	ENSPLAG00000005101	aff2	65	56.140	Poecilia_latipinna
ENSSLDG00000006836	-	65	51.145	ENSPMEG00000020100	-	94	50.730	Poecilia_mexicana
ENSSLDG00000006836	-	51	35.629	ENSPREG00000003285	aff2	54	40.800	Poecilia_reticulata
ENSSLDG00000006836	-	99	54.667	ENSPREG00000003514	-	100	53.128	Poecilia_reticulata
ENSSLDG00000006836	-	52	56.452	ENSPPYG00000012096	AFF3	53	56.452	Pongo_abelii
ENSSLDG00000006836	-	52	56.452	ENSPCOG00000016986	AFF3	53	55.738	Propithecus_coquereli
ENSSLDG00000006836	-	52	56.452	ENSPVAG00000006595	AFF3	52	56.452	Pteropus_vampyrus
ENSSLDG00000006836	-	52	54.098	ENSRNOG00000018830	Aff3	51	54.098	Rattus_norvegicus
ENSSLDG00000006836	-	52	55.738	ENSRBIG00000029993	AFF3	53	55.738	Rhinopithecus_bieti
ENSSLDG00000006836	-	52	56.452	ENSRROG00000033773	AFF3	53	55.738	Rhinopithecus_roxellana
ENSSLDG00000006836	-	52	56.452	ENSSBOG00000026667	AFF3	52	56.452	Saimiri_boliviensis_boliviensis
ENSSLDG00000006836	-	99	38.993	ENSSFOG00015021743	-	99	38.957	Scleropages_formosus
ENSSLDG00000006836	-	99	77.479	ENSSMAG00000007062	-	99	77.059	Scophthalmus_maximus
ENSSLDG00000006836	-	53	52.055	ENSSMAG00000004734	aff4	59	49.194	Scophthalmus_maximus
ENSSLDG00000006836	-	60	97.658	ENSSDUG00000023775	-	99	97.658	Seriola_dumerili
ENSSLDG00000006836	-	61	32.853	ENSSPUG00000001574	AFF1	77	36.064	Sphenodon_punctatus
ENSSLDG00000006836	-	97	73.824	ENSSPAG00000003972	-	98	73.653	Stegastes_partitus
ENSSLDG00000006836	-	99	58.436	ENSTRUG00000014005	-	99	58.251	Takifugu_rubripes
ENSSLDG00000006836	-	98	50.440	ENSTNIG00000007537	-	99	50.080	Tetraodon_nigroviridis
ENSSLDG00000006836	-	52	55.738	ENSVVUG00000028696	AFF3	53	55.738	Vulpes_vulpes
ENSSLDG00000006836	-	70	40.183	ENSVVUG00000009263	AFF1	84	65.574	Vulpes_vulpes
ENSSLDG00000006836	-	99	53.795	ENSXMAG00000004657	-	100	53.172	Xiphophorus_maculatus
ENSSLDG00000006836	-	52	52.308	ENSXMAG00000001642	aff4	50	46.094	Xiphophorus_maculatus