EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSLDG00000006838 (Gene tree)
Gene ID: -
Gene Symbol: sf3b2
Alias: fb53c07|wu:fb53c07|wu:fb93b08|zgc:136773
Full Name: splicing factor 3b subunit 2
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 8981 bases
Position: chrPEQF01099458.1:1434061-1443041
Accession: 111647232
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000008640	DUF382	PF04037.13	1.8e-58	1	1
ENSSLDP00000008604	DUF382	PF04037.13	1.9e-58	1	1
ENSSLDP00000008640	SAP	PF02037.27	4.5e-10	1	1
ENSSLDP00000008604	SAP	PF02037.27	4.7e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000008886	-	3366	XM_023396854	ENSSLDP00000008604	886 (aa)	XP_023252622	UPI000C6F9025
ENSSLDT00000008926	-	3315	XM_023396857	ENSSLDP00000008640	869 (aa)	XP_023252625	UPI000C6F4604

Gene Model

Click here to download ENSSLDG00000006838's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000006838's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000006838	sf3b2	86	75.163	ENSG00000087365	SF3B2	99	90.536	Homo_sapiens
ENSSLDG00000006838	sf3b2	97	92.593	ENSAPOG00000001974	sf3b2	96	91.385	Acanthochromis_polyacanthus
ENSSLDG00000006838	sf3b2	86	75.000	ENSAMEG00000017206	SF3B2	59	88.258	Ailuropoda_melanoleuca
ENSSLDG00000006838	sf3b2	100	88.401	ENSACIG00000000624	sf3b2	100	87.050	Amphilophus_citrinellus
ENSSLDG00000006838	sf3b2	100	93.348	ENSAOCG00000009207	sf3b2	100	93.348	Amphiprion_ocellaris
ENSSLDG00000006838	sf3b2	100	93.123	ENSAPEG00000002762	sf3b2	97	92.108	Amphiprion_percula
ENSSLDG00000006838	sf3b2	97	57.464	ENSACAG00000008615	SF3B2	59	71.078	Anolis_carolinensis
ENSSLDG00000006838	sf3b2	86	75.033	ENSANAG00000029120	SF3B2	60	88.425	Aotus_nancymaae
ENSSLDG00000006838	sf3b2	100	89.278	ENSACLG00000014771	sf3b2	100	87.923	Astatotilapia_calliptera
ENSSLDG00000006838	sf3b2	100	77.317	ENSAMXG00000007929	sf3b2	84	93.103	Astyanax_mexicanus
ENSSLDG00000006838	sf3b2	86	75.353	ENSBTAG00000002778	SF3B2	59	88.425	Bos_taurus
ENSSLDG00000006838	sf3b2	62	50.177	WBGene00021004	sftb-2	88	49.723	Caenorhabditis_elegans
ENSSLDG00000006838	sf3b2	86	75.163	ENSCJAG00000001656	SF3B2	60	88.425	Callithrix_jacchus
ENSSLDG00000006838	sf3b2	86	74.968	ENSCAFG00000013033	SF3B2	59	88.235	Canis_familiaris
ENSSLDG00000006838	sf3b2	86	74.968	ENSCAFG00020015382	SF3B2	59	88.235	Canis_lupus_dingo
ENSSLDG00000006838	sf3b2	86	75.225	ENSCHIG00000011211	SF3B2	59	88.425	Capra_hircus
ENSSLDG00000006838	sf3b2	86	75.033	ENSTSYG00000000959	SF3B2	60	88.235	Carlito_syrichta
ENSSLDG00000006838	sf3b2	57	62.181	ENSCAPG00000006065	SF3B2	79	91.525	Cavia_aperea
ENSSLDG00000006838	sf3b2	76	73.855	ENSCPOG00000008294	SF3B2	55	88.838	Cavia_porcellus
ENSSLDG00000006838	sf3b2	86	75.163	ENSCCAG00000035256	SF3B2	60	88.425	Cebus_capucinus
ENSSLDG00000006838	sf3b2	86	75.163	ENSCATG00000042240	SF3B2	60	88.425	Cercocebus_atys
ENSSLDG00000006838	sf3b2	86	75.163	ENSCLAG00000016852	SF3B2	60	88.235	Chinchilla_lanigera
ENSSLDG00000006838	sf3b2	86	74.808	ENSCSAG00000008121	SF3B2	59	88.425	Chlorocebus_sabaeus
ENSSLDG00000006838	sf3b2	89	87.755	ENSCHOG00000001476	SF3B2	75	85.938	Choloepus_hoffmanni
ENSSLDG00000006838	sf3b2	86	71.899	ENSCPBG00000022465	SF3B2	72	88.783	Chrysemys_picta_bellii
ENSSLDG00000006838	sf3b2	62	66.425	ENSCING00000005665	-	83	67.878	Ciona_intestinalis
ENSSLDG00000006838	sf3b2	63	66.239	ENSCSAVG00000002029	-	83	67.113	Ciona_savignyi
ENSSLDG00000006838	sf3b2	86	75.163	ENSCANG00000039680	SF3B2	60	88.425	Colobus_angolensis_palliatus
ENSSLDG00000006838	sf3b2	86	75.163	ENSCGRG00001015741	Sf3b2	60	88.425	Cricetulus_griseus_chok1gshd
ENSSLDG00000006838	sf3b2	86	75.163	ENSCGRG00000018110	Sf3b2	62	88.425	Cricetulus_griseus_crigri
ENSSLDG00000006838	sf3b2	87	81.142	ENSCSEG00000000230	sf3b2	66	94.264	Cynoglossus_semilaevis
ENSSLDG00000006838	sf3b2	100	85.763	ENSCVAG00000003357	sf3b2	100	83.927	Cyprinodon_variegatus
ENSSLDG00000006838	sf3b2	97	73.618	ENSDARG00000018049	sf3b2	64	91.651	Danio_rerio
ENSSLDG00000006838	sf3b2	86	75.197	ENSDNOG00000009484	SF3B2	66	87.666	Dasypus_novemcinctus
ENSSLDG00000006838	sf3b2	86	75.425	ENSDORG00000002495	Sf3b2	84	74.507	Dipodomys_ordii
ENSSLDG00000006838	sf3b2	57	81.797	ENSETEG00000020284	SF3B2	54	81.585	Echinops_telfairi
ENSSLDG00000006838	sf3b2	92	62.861	ENSEBUG00000013703	sf3b2	88	78.302	Eptatretus_burgeri
ENSSLDG00000006838	sf3b2	86	75.000	ENSEASG00005004508	SF3B2	59	88.425	Equus_asinus_asinus
ENSSLDG00000006838	sf3b2	86	75.000	ENSECAG00000024461	SF3B2	59	88.425	Equus_caballus
ENSSLDG00000006838	sf3b2	100	80.988	ENSELUG00000005586	sf3b2	83	88.805	Esox_lucius
ENSSLDG00000006838	sf3b2	86	75.459	ENSFCAG00000013289	SF3B2	60	88.425	Felis_catus
ENSSLDG00000006838	sf3b2	84	64.393	ENSFALG00000014653	SF3B2	74	76.190	Ficedula_albicollis
ENSSLDG00000006838	sf3b2	86	74.319	ENSFDAG00000019806	SF3B2	59	88.235	Fukomys_damarensis
ENSSLDG00000006838	sf3b2	100	86.682	ENSFHEG00000020968	sf3b2	100	84.386	Fundulus_heteroclitus
ENSSLDG00000006838	sf3b2	77	86.033	ENSGMOG00000012131	sf3b2	81	93.333	Gadus_morhua
ENSSLDG00000006838	sf3b2	100	87.830	ENSGAFG00000001675	sf3b2	100	87.830	Gambusia_affinis
ENSSLDG00000006838	sf3b2	77	89.599	ENSGACG00000019012	sf3b2	100	87.519	Gasterosteus_aculeatus
ENSSLDG00000006838	sf3b2	98	68.672	ENSGAGG00000023916	SF3B2	61	88.425	Gopherus_agassizii
ENSSLDG00000006838	sf3b2	78	90.141	ENSGGOG00000028448	SF3B2	60	88.425	Gorilla_gorilla
ENSSLDG00000006838	sf3b2	100	89.278	ENSHBUG00000017349	sf3b2	100	87.923	Haplochromis_burtoni
ENSSLDG00000006838	sf3b2	86	75.294	ENSHGLG00000010807	SF3B2	60	88.235	Heterocephalus_glaber_female
ENSSLDG00000006838	sf3b2	86	75.294	ENSHGLG00100006361	SF3B2	60	88.235	Heterocephalus_glaber_male
ENSSLDG00000006838	sf3b2	100	80.471	ENSHCOG00000016203	sf3b2	62	93.690	Hippocampus_comes
ENSSLDG00000006838	sf3b2	100	74.945	ENSIPUG00000009383	sf3b2	61	92.060	Ictalurus_punctatus
ENSSLDG00000006838	sf3b2	86	75.098	ENSSTOG00000028892	SF3B2	60	88.046	Ictidomys_tridecemlineatus
ENSSLDG00000006838	sf3b2	86	74.416	ENSJJAG00000018193	Sf3b2	60	88.425	Jaculus_jaculus
ENSSLDG00000006838	sf3b2	100	82.313	ENSKMAG00000020181	sf3b2	100	83.579	Kryptolebias_marmoratus
ENSSLDG00000006838	sf3b2	100	89.966	ENSLBEG00000027739	sf3b2	100	89.628	Labrus_bergylta
ENSSLDG00000006838	sf3b2	84	79.020	ENSLACG00000010429	SF3B2	66	88.491	Latimeria_chalumnae
ENSSLDG00000006838	sf3b2	86	75.066	ENSLAFG00000002128	SF3B2	60	88.046	Loxodonta_africana
ENSSLDG00000006838	sf3b2	86	75.065	ENSMFAG00000003064	SF3B2	60	88.258	Macaca_fascicularis
ENSSLDG00000006838	sf3b2	86	71.091	ENSMMUG00000011743	SF3B2	60	81.973	Macaca_mulatta
ENSSLDG00000006838	sf3b2	86	74.967	ENSMNEG00000034437	SF3B2	60	88.425	Macaca_nemestrina
ENSSLDG00000006838	sf3b2	86	74.967	ENSMLEG00000029373	SF3B2	60	88.425	Mandrillus_leucophaeus
ENSSLDG00000006838	sf3b2	100	93.581	ENSMAMG00000014103	sf3b2	100	92.777	Mastacembelus_armatus
ENSSLDG00000006838	sf3b2	100	89.278	ENSMZEG00005020789	sf3b2	100	87.923	Maylandia_zebra
ENSSLDG00000006838	sf3b2	97	67.699	ENSMICG00000016942	-	62	86.338	Microcebus_murinus
ENSSLDG00000006838	sf3b2	86	75.294	ENSMICG00000008565	-	60	88.235	Microcebus_murinus
ENSSLDG00000006838	sf3b2	86	75.163	ENSMOCG00000003136	Sf3b2	60	88.425	Microtus_ochrogaster
ENSSLDG00000006838	sf3b2	100	84.763	ENSMMOG00000012928	sf3b2	61	97.510	Mola_mola
ENSSLDG00000006838	sf3b2	74	74.884	ENSMODG00000025020	-	82	80.762	Monodelphis_domestica
ENSSLDG00000006838	sf3b2	86	74.674	ENSMODG00000008490	-	64	88.235	Monodelphis_domestica
ENSSLDG00000006838	sf3b2	100	86.560	ENSMALG00000015137	sf3b2	100	84.624	Monopterus_albus
ENSSLDG00000006838	sf3b2	86	75.033	MGP_CAROLIEiJ_G0022539	Sf3b2	60	88.235	Mus_caroli
ENSSLDG00000006838	sf3b2	86	75.033	ENSMUSG00000024853	Sf3b2	60	88.425	Mus_musculus
ENSSLDG00000006838	sf3b2	86	74.771	MGP_PahariEiJ_G0014036	Sf3b2	60	88.046	Mus_pahari
ENSSLDG00000006838	sf3b2	86	74.902	MGP_SPRETEiJ_G0023453	Sf3b2	60	88.425	Mus_spretus
ENSSLDG00000006838	sf3b2	86	74.968	ENSMPUG00000011349	SF3B2	59	88.235	Mustela_putorius_furo
ENSSLDG00000006838	sf3b2	86	74.840	ENSMLUG00000011136	SF3B2	59	88.615	Myotis_lucifugus
ENSSLDG00000006838	sf3b2	86	74.316	ENSNGAG00000012103	Sf3b2	60	88.235	Nannospalax_galili
ENSSLDG00000006838	sf3b2	86	71.953	ENSNLEG00000006007	SF3B2	59	85.958	Nomascus_leucogenys
ENSSLDG00000006838	sf3b2	78	84.463	ENSMEUG00000000019	SF3B2	72	84.463	Notamacropus_eugenii
ENSSLDG00000006838	sf3b2	97	66.516	ENSODEG00000017764	SF3B2	58	82.543	Octodon_degus
ENSSLDG00000006838	sf3b2	100	91.309	ENSONIG00000013068	sf3b2	100	88.262	Oreochromis_niloticus
ENSSLDG00000006838	sf3b2	86	67.578	ENSOANG00000012482	SF3B2	86	82.249	Ornithorhynchus_anatinus
ENSSLDG00000006838	sf3b2	97	69.899	ENSOCUG00000015722	-	62	87.666	Oryctolagus_cuniculus
ENSSLDG00000006838	sf3b2	63	48.741	ENSOCUG00000024154	-	59	59.633	Oryctolagus_cuniculus
ENSSLDG00000006838	sf3b2	100	83.896	ENSORLG00000008235	sf3b2	97	79.395	Oryzias_latipes
ENSSLDG00000006838	sf3b2	100	83.896	ENSORLG00020005357	sf3b2	100	79.395	Oryzias_latipes_hni
ENSSLDG00000006838	sf3b2	100	84.122	ENSORLG00015022454	sf3b2	89	94.455	Oryzias_latipes_hsok
ENSSLDG00000006838	sf3b2	100	81.869	ENSOMEG00000017480	sf3b2	100	80.067	Oryzias_melastigma
ENSSLDG00000006838	sf3b2	63	86.025	ENSOGAG00000005799	SF3B2	59	87.666	Otolemur_garnettii
ENSSLDG00000006838	sf3b2	97	69.501	ENSOARG00000002125	SF3B2	71	87.856	Ovis_aries
ENSSLDG00000006838	sf3b2	86	75.163	ENSPPAG00000007359	SF3B2	60	88.425	Pan_paniscus
ENSSLDG00000006838	sf3b2	86	75.459	ENSPPRG00000013334	SF3B2	60	88.425	Panthera_pardus
ENSSLDG00000006838	sf3b2	86	75.459	ENSPTIG00000015022	SF3B2	60	88.425	Panthera_tigris_altaica
ENSSLDG00000006838	sf3b2	86	75.163	ENSPTRG00000003912	SF3B2	60	88.425	Pan_troglodytes
ENSSLDG00000006838	sf3b2	86	75.163	ENSPANG00000008593	SF3B2	60	88.425	Papio_anubis
ENSSLDG00000006838	sf3b2	100	79.713	ENSPKIG00000016576	sf3b2	85	95.594	Paramormyrops_kingsleyae
ENSSLDG00000006838	sf3b2	86	75.524	ENSPSIG00000003158	SF3B2	79	88.994	Pelodiscus_sinensis
ENSSLDG00000006838	sf3b2	86	75.033	ENSPEMG00000015437	Sf3b2	60	88.425	Peromyscus_maniculatus_bairdii
ENSSLDG00000006838	sf3b2	86	73.828	ENSPCIG00000008381	SF3B2	87	74.803	Phascolarctos_cinereus
ENSSLDG00000006838	sf3b2	100	87.026	ENSPFOG00000002552	sf3b2	100	85.534	Poecilia_formosa
ENSSLDG00000006838	sf3b2	100	86.797	ENSPLAG00000001471	sf3b2	100	85.763	Poecilia_latipinna
ENSSLDG00000006838	sf3b2	100	83.582	ENSPMEG00000013180	sf3b2	100	86.682	Poecilia_mexicana
ENSSLDG00000006838	sf3b2	100	85.747	ENSPREG00000002665	sf3b2	100	87.945	Poecilia_reticulata
ENSSLDG00000006838	sf3b2	86	74.968	ENSPCAG00000005129	SF3B2	59	88.235	Procavia_capensis
ENSSLDG00000006838	sf3b2	86	75.033	ENSPCOG00000025375	SF3B2	60	88.235	Propithecus_coquereli
ENSSLDG00000006838	sf3b2	93	86.150	ENSPNYG00000023594	sf3b2	100	84.094	Pundamilia_nyererei
ENSSLDG00000006838	sf3b2	100	76.889	ENSPNAG00000001891	sf3b2	60	94.307	Pygocentrus_nattereri
ENSSLDG00000006838	sf3b2	86	74.902	ENSRNOG00000020412	Sf3b2	60	88.235	Rattus_norvegicus
ENSSLDG00000006838	sf3b2	86	75.033	ENSRBIG00000034065	SF3B2	60	88.425	Rhinopithecus_bieti
ENSSLDG00000006838	sf3b2	86	75.033	ENSRROG00000034496	SF3B2	60	88.425	Rhinopithecus_roxellana
ENSSLDG00000006838	sf3b2	97	69.551	ENSSBOG00000026337	SF3B2	59	87.666	Saimiri_boliviensis_boliviensis
ENSSLDG00000006838	sf3b2	86	70.243	ENSSHAG00000010933	-	58	84.981	Sarcophilus_harrisii
ENSSLDG00000006838	sf3b2	96	59.181	ENSSHAG00000018043	-	63	74.102	Sarcophilus_harrisii
ENSSLDG00000006838	sf3b2	100	77.790	ENSSFOG00015021125	sf3b2	100	76.368	Scleropages_formosus
ENSSLDG00000006838	sf3b2	100	91.535	ENSSMAG00000004079	sf3b2	97	91.196	Scophthalmus_maximus
ENSSLDG00000006838	sf3b2	89	100.000	ENSSDUG00000008499	sf3b2	96	100.000	Seriola_dumerili
ENSSLDG00000006838	sf3b2	74	80.680	ENSSPUG00000009198	SF3B2	61	88.783	Sphenodon_punctatus
ENSSLDG00000006838	sf3b2	100	93.660	ENSSPAG00000004406	sf3b2	58	99.042	Stegastes_partitus
ENSSLDG00000006838	sf3b2	86	75.096	ENSSSCG00000012957	SF3B2	59	88.615	Sus_scrofa
ENSSLDG00000006838	sf3b2	100	68.694	ENSTRUG00000007611	sf3b2	76	87.287	Takifugu_rubripes
ENSSLDG00000006838	sf3b2	87	91.841	ENSTNIG00000007441	sf3b2	93	91.379	Tetraodon_nigroviridis
ENSSLDG00000006838	sf3b2	87	66.353	ENSTBEG00000004258	SF3B2	57	87.692	Tupaia_belangeri
ENSSLDG00000006838	sf3b2	86	74.968	ENSTTRG00000014339	SF3B2	59	88.425	Tursiops_truncatus
ENSSLDG00000006838	sf3b2	84	74.603	ENSUAMG00000020754	SF3B2	55	87.375	Ursus_americanus
ENSSLDG00000006838	sf3b2	86	75.096	ENSUMAG00000010994	SF3B2	59	88.425	Ursus_maritimus
ENSSLDG00000006838	sf3b2	86	74.968	ENSVVUG00000027029	SF3B2	59	88.235	Vulpes_vulpes
ENSSLDG00000006838	sf3b2	90	65.802	ENSXETG00000008422	sf3b2	67	85.878	Xenopus_tropicalis
ENSSLDG00000006838	sf3b2	87	77.513	ENSXCOG00000008943	sf3b2	80	95.220	Xiphophorus_couchianus
ENSSLDG00000006838	sf3b2	100	85.829	ENSXMAG00000008467	sf3b2	100	86.514	Xiphophorus_maculatus