EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000006883 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: uncharacterized LOC111665939
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 6096 bases
Position: chrPEQF01099142.1:2328-8423
Accession: 111665939
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000008669	Ribonuc_2-5A	PF06479.12	1.2e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000008958	-	3730	XM_023421072	ENSSLDP00000008669	922 (aa)	XP_023276840	UPI000C6F8654

Gene Model

Click here to download ENSSLDG00000006883's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000006883's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000006883	-	100	94.685	ENSSLDG00000004852	-	100	94.685

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000006883	-	97	64.502	ENSAPOG00000018674	-	98	64.254	Acanthochromis_polyacanthus
ENSSLDG00000006883	-	99	69.089	ENSAOCG00000006611	-	99	69.089	Amphiprion_ocellaris
ENSSLDG00000006883	-	99	63.449	ENSAOCG00000006622	-	99	63.449	Amphiprion_ocellaris
ENSSLDG00000006883	-	99	63.124	ENSAPEG00000022456	-	99	63.124	Amphiprion_percula
ENSSLDG00000006883	-	96	68.989	ENSATEG00000016497	-	100	69.101	Anabas_testudineus
ENSSLDG00000006883	-	98	65.098	ENSACLG00000000717	-	99	64.751	Astatotilapia_calliptera
ENSSLDG00000006883	-	96	48.197	ENSAMXG00000029533	-	99	48.197	Astyanax_mexicanus
ENSSLDG00000006883	-	98	54.506	ENSCVAG00000016590	-	98	55.049	Cyprinodon_variegatus
ENSSLDG00000006883	-	95	47.514	ENSELUG00000021509	-	98	47.305	Esox_lucius
ENSSLDG00000006883	-	99	65.804	ENSMAMG00000005604	-	99	66.019	Mastacembelus_armatus
ENSSLDG00000006883	-	99	63.287	ENSMZEG00005001859	-	99	62.860	Maylandia_zebra
ENSSLDG00000006883	-	99	57.912	ENSORLG00000025218	-	99	57.804	Oryzias_latipes
ENSSLDG00000006883	-	99	57.912	ENSORLG00020014495	-	99	57.804	Oryzias_latipes_hni
ENSSLDG00000006883	-	99	57.705	ENSOMEG00000006152	-	99	57.705	Oryzias_melastigma
ENSSLDG00000006883	-	57	64.137	ENSPFOG00000000794	-	99	64.137	Poecilia_formosa
ENSSLDG00000006883	-	99	57.839	ENSPMEG00000016617	-	99	57.778	Poecilia_mexicana
ENSSLDG00000006883	-	95	46.988	ENSPNAG00000004804	-	98	46.162	Pygocentrus_nattereri
ENSSLDG00000006883	-	96	46.363	ENSSFOG00015018634	-	98	45.820	Scleropages_formosus
ENSSLDG00000006883	-	99	62.106	ENSSMAG00000011502	-	98	62.649	Scophthalmus_maximus
ENSSLDG00000006883	-	99	62.229	ENSSMAG00000011493	-	98	62.229	Scophthalmus_maximus
ENSSLDG00000006883	-	99	85.262	ENSSDUG00000007315	-	99	85.262	Seriola_dumerili