EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000006955 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 1893 bases
Position: chrPEQF01013886.1:1602-3494
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000008760	RVT_1	PF00078.27	5.1e-29	1	2
ENSSLDP00000008760	RVT_1	PF00078.27	5.1e-29	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000009053	-	1122	-	ENSSLDP00000008760	374 (aa)	-	-

Gene Model

Click here to download ENSSLDG00000006955's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000006955's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000006955	-	71	32.673	ENSSLDG00000000237	-	96	32.673

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000006955	-	91	33.947	ENSAPOG00000001366	-	91	33.947	Acanthochromis_polyacanthus
ENSSLDG00000006955	-	74	35.873	ENSAPOG00000014771	-	79	35.873	Acanthochromis_polyacanthus
ENSSLDG00000006955	-	72	44.013	ENSAPOG00000015742	-	97	44.013	Acanthochromis_polyacanthus
ENSSLDG00000006955	-	89	34.409	ENSACIG00000010538	-	97	34.409	Amphilophus_citrinellus
ENSSLDG00000006955	-	67	30.769	ENSACIG00000020856	-	62	30.769	Amphilophus_citrinellus
ENSSLDG00000006955	-	99	32.029	ENSAOCG00000012592	-	88	32.029	Amphiprion_ocellaris
ENSSLDG00000006955	-	98	34.605	ENSAOCG00000006855	-	92	34.605	Amphiprion_ocellaris
ENSSLDG00000006955	-	87	35.890	ENSAOCG00000014605	-	72	35.890	Amphiprion_ocellaris
ENSSLDG00000006955	-	86	37.989	ENSAOCG00000019069	-	98	37.989	Amphiprion_ocellaris
ENSSLDG00000006955	-	74	45.687	ENSAOCG00000000894	-	94	45.687	Amphiprion_ocellaris
ENSSLDG00000006955	-	77	30.675	ENSATEG00000019721	-	84	30.675	Anabas_testudineus
ENSSLDG00000006955	-	70	33.555	ENSACAG00000010816	-	85	33.555	Anolis_carolinensis
ENSSLDG00000006955	-	96	39.698	ENSACLG00000013571	-	98	39.698	Astatotilapia_calliptera
ENSSLDG00000006955	-	84	38.810	ENSACLG00000012857	-	96	38.810	Astatotilapia_calliptera
ENSSLDG00000006955	-	78	31.420	ENSACLG00000011319	-	85	31.420	Astatotilapia_calliptera
ENSSLDG00000006955	-	63	40.146	ENSACLG00000010837	-	67	40.146	Astatotilapia_calliptera
ENSSLDG00000006955	-	60	46.970	ENSAMXG00000041014	-	100	46.970	Astyanax_mexicanus
ENSSLDG00000006955	-	71	41.311	ENSAMXG00000040763	-	77	41.311	Astyanax_mexicanus
ENSSLDG00000006955	-	90	31.367	ENSCVAG00000020933	-	84	31.367	Cyprinodon_variegatus
ENSSLDG00000006955	-	91	37.302	ENSCVAG00000018360	-	91	37.302	Cyprinodon_variegatus
ENSSLDG00000006955	-	88	68.306	ENSELUG00000014378	-	88	68.306	Esox_lucius
ENSSLDG00000006955	-	90	37.731	ENSHBUG00000007736	-	90	37.731	Haplochromis_burtoni
ENSSLDG00000006955	-	55	33.191	ENSHBUG00000003796	-	58	33.191	Haplochromis_burtoni
ENSSLDG00000006955	-	75	33.446	ENSHBUG00000011715	-	80	33.446	Haplochromis_burtoni
ENSSLDG00000006955	-	98	39.454	ENSKMAG00000014507	-	52	39.454	Kryptolebias_marmoratus
ENSSLDG00000006955	-	91	37.467	ENSKMAG00000014393	-	89	37.467	Kryptolebias_marmoratus
ENSSLDG00000006955	-	86	35.262	ENSLBEG00000020242	-	99	35.262	Labrus_bergylta
ENSSLDG00000006955	-	98	37.871	ENSLBEG00000015758	-	60	37.871	Labrus_bergylta
ENSSLDG00000006955	-	91	36.074	ENSLBEG00000004148	-	79	36.074	Labrus_bergylta
ENSSLDG00000006955	-	84	32.194	ENSLBEG00000023714	-	94	32.194	Labrus_bergylta
ENSSLDG00000006955	-	99	38.329	ENSMZEG00005021767	-	51	38.329	Maylandia_zebra
ENSSLDG00000006955	-	99	40.625	ENSMZEG00005017030	-	78	40.625	Maylandia_zebra
ENSSLDG00000006955	-	59	41.245	ENSMZEG00005006211	-	62	41.245	Maylandia_zebra
ENSSLDG00000006955	-	99	40.194	ENSMZEG00005011529	-	77	40.194	Maylandia_zebra
ENSSLDG00000006955	-	65	39.858	ENSMZEG00005016362	-	99	39.858	Maylandia_zebra
ENSSLDG00000006955	-	65	30.605	ENSNBRG00000001934	-	60	30.605	Neolamprologus_brichardi
ENSSLDG00000006955	-	66	33.684	ENSNBRG00000022130	-	68	33.684	Neolamprologus_brichardi
ENSSLDG00000006955	-	59	33.716	ENSNBRG00000013792	-	76	33.716	Neolamprologus_brichardi
ENSSLDG00000006955	-	99	38.631	ENSNBRG00000012595	-	93	38.631	Neolamprologus_brichardi
ENSSLDG00000006955	-	90	36.193	ENSNBRG00000000972	-	93	36.193	Neolamprologus_brichardi
ENSSLDG00000006955	-	99	35.980	ENSORLG00000024464	-	69	36.790	Oryzias_latipes
ENSSLDG00000006955	-	71	40.461	ENSORLG00000028706	-	61	40.461	Oryzias_latipes
ENSSLDG00000006955	-	71	39.474	ENSORLG00000028454	-	97	39.474	Oryzias_latipes
ENSSLDG00000006955	-	91	40.155	ENSORLG00000023713	-	97	40.155	Oryzias_latipes
ENSSLDG00000006955	-	80	39.349	ENSORLG00000024236	-	89	39.349	Oryzias_latipes
ENSSLDG00000006955	-	98	39.259	ENSORLG00000030415	-	50	39.259	Oryzias_latipes
ENSSLDG00000006955	-	98	39.851	ENSORLG00000023604	-	50	39.851	Oryzias_latipes
ENSSLDG00000006955	-	63	44.689	ENSORLG00000028976	-	72	44.689	Oryzias_latipes
ENSSLDG00000006955	-	71	41.776	ENSORLG00020018629	-	80	41.776	Oryzias_latipes_hni
ENSSLDG00000006955	-	63	39.051	ENSORLG00020016429	-	52	39.051	Oryzias_latipes_hni
ENSSLDG00000006955	-	57	41.600	ENSORLG00020007002	-	98	41.600	Oryzias_latipes_hni
ENSSLDG00000006955	-	64	39.350	ENSORLG00020022004	-	95	39.350	Oryzias_latipes_hni
ENSSLDG00000006955	-	71	43.750	ENSORLG00020007779	-	80	43.750	Oryzias_latipes_hni
ENSSLDG00000006955	-	71	39.934	ENSORLG00020014149	-	94	39.934	Oryzias_latipes_hni
ENSSLDG00000006955	-	71	43.421	ENSORLG00020010425	-	53	43.421	Oryzias_latipes_hni
ENSSLDG00000006955	-	97	39.098	ENSORLG00020014626	-	74	39.098	Oryzias_latipes_hni
ENSSLDG00000006955	-	73	39.103	ENSORLG00015000419	-	88	39.103	Oryzias_latipes_hsok
ENSSLDG00000006955	-	66	40.283	ENSORLG00015022393	-	94	40.283	Oryzias_latipes_hsok
ENSSLDG00000006955	-	89	35.676	ENSORLG00015020895	-	99	35.676	Oryzias_latipes_hsok
ENSSLDG00000006955	-	53	43.277	ENSORLG00015007976	-	63	43.277	Oryzias_latipes_hsok
ENSSLDG00000006955	-	67	35.959	ENSORLG00015021848	-	96	35.959	Oryzias_latipes_hsok
ENSSLDG00000006955	-	59	36.486	ENSORLG00015008227	-	61	36.486	Oryzias_latipes_hsok
ENSSLDG00000006955	-	98	36.480	ENSORLG00015021206	-	77	36.480	Oryzias_latipes_hsok
ENSSLDG00000006955	-	71	42.105	ENSORLG00015007703	-	77	42.105	Oryzias_latipes_hsok
ENSSLDG00000006955	-	92	31.948	ENSOMEG00000013211	-	89	31.948	Oryzias_melastigma
ENSSLDG00000006955	-	64	41.993	ENSPKIG00000013511	-	95	41.993	Paramormyrops_kingsleyae
ENSSLDG00000006955	-	84	35.783	ENSPKIG00000024018	-	95	35.783	Paramormyrops_kingsleyae
ENSSLDG00000006955	-	71	31.597	ENSPMGG00000014421	-	71	31.597	Periophthalmus_magnuspinnatus
ENSSLDG00000006955	-	99	35.784	ENSPFOG00000024463	-	52	35.784	Poecilia_formosa
ENSSLDG00000006955	-	86	33.151	ENSPLAG00000015080	-	86	33.151	Poecilia_latipinna
ENSSLDG00000006955	-	99	40.587	ENSPMEG00000010792	-	52	40.587	Poecilia_mexicana
ENSSLDG00000006955	-	89	34.328	ENSPREG00000021355	-	92	34.328	Poecilia_reticulata
ENSSLDG00000006955	-	86	32.961	ENSPREG00000001352	-	100	32.961	Poecilia_reticulata
ENSSLDG00000006955	-	84	33.427	ENSPREG00000004933	-	88	33.427	Poecilia_reticulata
ENSSLDG00000006955	-	97	34.586	ENSPREG00000006501	-	70	34.586	Poecilia_reticulata
ENSSLDG00000006955	-	94	30.612	ENSPREG00000010319	-	93	30.612	Poecilia_reticulata
ENSSLDG00000006955	-	79	33.433	ENSPNYG00000023697	-	76	33.433	Pundamilia_nyererei
ENSSLDG00000006955	-	70	38.255	ENSPNYG00000002466	-	99	38.255	Pundamilia_nyererei
ENSSLDG00000006955	-	71	43.092	ENSPNAG00000014375	-	74	43.092	Pygocentrus_nattereri
ENSSLDG00000006955	-	94	35.128	ENSPNAG00000002786	-	95	35.128	Pygocentrus_nattereri
ENSSLDG00000006955	-	70	42.647	ENSPNAG00000010342	-	96	42.647	Pygocentrus_nattereri
ENSSLDG00000006955	-	94	34.606	ENSPNAG00000024749	-	92	34.606	Pygocentrus_nattereri
ENSSLDG00000006955	-	98	34.901	ENSSMAG00000014015	-	83	34.901	Scophthalmus_maximus
ENSSLDG00000006955	-	57	32.895	ENSSDUG00000017945	-	70	32.895	Seriola_dumerili
ENSSLDG00000006955	-	69	31.987	ENSSDUG00000015364	-	63	31.987	Seriola_dumerili
ENSSLDG00000006955	-	69	40.741	ENSSDUG00000021791	-	99	40.741	Seriola_dumerili
ENSSLDG00000006955	-	99	37.226	ENSSPUG00000015446	-	92	37.226	Sphenodon_punctatus
ENSSLDG00000006955	-	75	35.540	ENSSPAG00000012089	-	86	35.540	Stegastes_partitus
ENSSLDG00000006955	-	87	37.912	ENSSPAG00000000151	-	79	37.912	Stegastes_partitus
ENSSLDG00000006955	-	98	39.370	ENSXETG00000034134	-	50	39.370	Xenopus_tropicalis
ENSSLDG00000006955	-	98	38.824	ENSXETG00000032308	-	51	38.824	Xenopus_tropicalis
ENSSLDG00000006955	-	99	37.500	ENSXETG00000030860	-	50	37.500	Xenopus_tropicalis
ENSSLDG00000006955	-	68	37.288	ENSXCOG00000016894	-	88	37.288	Xiphophorus_couchianus
ENSSLDG00000006955	-	66	38.869	ENSXMAG00000026184	-	95	38.869	Xiphophorus_maculatus
ENSSLDG00000006955	-	93	32.626	ENSXMAG00000023211	-	85	32.626	Xiphophorus_maculatus