EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000006977 (Gene tree)
Gene ID: -
Gene Symbol: rab18a
Alias: fc62e07|wu:fc62e07|zgc:77145
Full Name: ras-related protein Rab-18
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 11874 bases
Position: chrPEQF01098973.1:18083-29956
Accession: 111659846
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000008805	MMR_HSR1	PF01926.23	1e-07	1	1
ENSSLDP00000008814	MMR_HSR1	PF01926.23	5.9e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000009098	-	3730	XM_023412929	ENSSLDP00000008805	204 (aa)	XP_023268697	UPI000BBE20B4
ENSSLDT00000009108	-	543	-	ENSSLDP00000008814	180 (aa)	-	-

Gene Model

Click here to download ENSSLDG00000006977's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000006977's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000006977	rab18a	77	31.481	ENSSLDG00000025169	rhebl1	85	31.481
ENSSLDG00000006977	rab18a	90	39.674	ENSSLDG00000020438	rab22a	93	39.674
ENSSLDG00000006977	rab18a	82	35.882	ENSSLDG00000021833	si:ch73-116o1.2	83	35.260
ENSSLDG00000006977	rab18a	79	45.679	ENSSLDG00000005221	rab11ba	74	45.679
ENSSLDG00000006977	rab18a	79	45.679	ENSSLDG00000020676	rab11bb	74	45.679
ENSSLDG00000006977	rab18a	75	33.974	ENSSLDG00000009464	rab36	58	33.974
ENSSLDG00000006977	rab18a	80	48.171	ENSSLDG00000010503	rab14	76	48.171
ENSSLDG00000006977	rab18a	72	41.830	ENSSLDG00000008070	-	63	42.105
ENSSLDG00000006977	rab18a	83	40.116	ENSSLDG00000009068	-	81	40.116
ENSSLDG00000006977	rab18a	84	39.306	ENSSLDG00000003264	rab6ba	81	39.306
ENSSLDG00000006977	rab18a	84	45.087	ENSSLDG00000003631	si:dkey-16l2.16	82	44.571
ENSSLDG00000006977	rab18a	83	50.000	ENSSLDG00000022533	rab30	83	50.000
ENSSLDG00000006977	rab18a	71	40.136	ENSSLDG00000019214	zgc:101559	63	40.136
ENSSLDG00000006977	rab18a	99	84.314	ENSSLDG00000006014	rab18b	93	85.340
ENSSLDG00000006977	rab18a	80	42.683	ENSSLDG00000021984	RAB15	77	42.683
ENSSLDG00000006977	rab18a	84	37.209	ENSSLDG00000000287	rab23	75	37.662
ENSSLDG00000006977	rab18a	73	36.000	ENSSLDG00000015122	rras2	79	36.025
ENSSLDG00000006977	rab18a	84	39.306	ENSSLDG00000012474	rab6bb	81	39.306
ENSSLDG00000006977	rab18a	77	32.099	ENSSLDG00000018681	rheb	85	32.099
ENSSLDG00000006977	rab18a	83	38.372	ENSSLDG00000006360	RAB39B	81	38.372
ENSSLDG00000006977	rab18a	79	36.747	ENSSLDG00000000773	rab9a	82	36.747
ENSSLDG00000006977	rab18a	91	40.741	ENSSLDG00000011069	rab5aa	87	40.741
ENSSLDG00000006977	rab18a	79	37.349	ENSSLDG00000009351	rab9b	82	37.349
ENSSLDG00000006977	rab18a	80	46.951	ENSSLDG00000005718	-	76	46.951
ENSSLDG00000006977	rab18a	88	36.612	ENSSLDG00000011597	si:dkey-13a21.4	87	36.612
ENSSLDG00000006977	rab18a	81	32.530	ENSSLDG00000012627	hrasb	87	32.530
ENSSLDG00000006977	rab18a	80	37.725	ENSSLDG00000012391	RAB7A	81	37.725
ENSSLDG00000006977	rab18a	95	45.918	ENSSLDG00000011757	-	84	50.299
ENSSLDG00000006977	rab18a	88	48.370	ENSSLDG00000022555	rab2a	85	48.370
ENSSLDG00000006977	rab18a	74	39.735	ENSSLDG00000020918	RAB17	66	39.735
ENSSLDG00000006977	rab18a	59	37.190	ENSSLDG00000014812	rab34b	59	37.190
ENSSLDG00000006977	rab18a	79	43.558	ENSSLDG00000023317	rab15	76	43.558
ENSSLDG00000006977	rab18a	85	36.932	ENSSLDG00000008584	rab33ba	82	36.872
ENSSLDG00000006977	rab18a	88	44.865	ENSSLDG00000015823	-	90	44.865
ENSSLDG00000006977	rab18a	79	37.952	ENSSLDG00000004352	-	78	37.952
ENSSLDG00000006977	rab18a	88	38.122	ENSSLDG00000015289	-	85	38.122
ENSSLDG00000006977	rab18a	80	37.725	ENSSLDG00000024959	-	81	37.725
ENSSLDG00000006977	rab18a	80	40.000	ENSSLDG00000020354	rab42a	76	40.000
ENSSLDG00000006977	rab18a	79	48.780	ENSSLDG00000022239	rab12	67	48.780
ENSSLDG00000006977	rab18a	79	45.062	ENSSLDG00000012116	rab11al	75	45.062
ENSSLDG00000006977	rab18a	95	46.939	ENSSLDG00000018942	rab1ab	90	48.087
ENSSLDG00000006977	rab18a	84	37.714	ENSSLDG00000022282	rab41	80	37.714
ENSSLDG00000006977	rab18a	79	44.444	ENSSLDG00000012091	rab25b	77	44.444
ENSSLDG00000006977	rab18a	77	44.025	ENSSLDG00000009725	-	77	44.025
ENSSLDG00000006977	rab18a	93	38.776	ENSSLDG00000022004	rab33a	53	42.857
ENSSLDG00000006977	rab18a	52	36.111	ENSSLDG00000014472	-	83	36.364
ENSSLDG00000006977	rab18a	85	34.091	ENSSLDG00000009573	rab34a	73	34.091
ENSSLDG00000006977	rab18a	79	45.062	ENSSLDG00000009438	rab11a	75	45.062
ENSSLDG00000006977	rab18a	79	50.617	ENSSLDG00000012251	rab1ba	80	50.617
ENSSLDG00000006977	rab18a	89	31.522	ENSSLDG00000022168	kras	97	31.522
ENSSLDG00000006977	rab18a	79	45.679	ENSSLDG00000005275	-	74	45.679
ENSSLDG00000006977	rab18a	79	51.235	ENSSLDG00000018024	zgc:171927	75	51.235
ENSSLDG00000006977	rab18a	80	41.317	ENSSLDG00000002646	si:dkey-34d22.5	75	41.317
ENSSLDG00000006977	rab18a	79	44.444	ENSSLDG00000010880	rab25a	76	44.444
ENSSLDG00000006977	rab18a	96	40.887	ENSSLDG00000017771	rab5c	76	43.452
ENSSLDG00000006977	rab18a	79	31.928	ENSSLDG00000015143	dnajc27	61	31.928

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000006977	rab18a	100	98.039	ENSAPOG00000010760	rab18a	100	98.039	Acanthochromis_polyacanthus
ENSSLDG00000006977	rab18a	100	95.556	ENSACIG00000009617	rab18a	93	95.833	Amphilophus_citrinellus
ENSSLDG00000006977	rab18a	100	97.549	ENSAOCG00000016233	rab18a	100	97.549	Amphiprion_ocellaris
ENSSLDG00000006977	rab18a	100	97.549	ENSAPEG00000005392	rab18a	100	97.549	Amphiprion_percula
ENSSLDG00000006977	rab18a	100	98.529	ENSATEG00000021911	rab18a	100	98.529	Anabas_testudineus
ENSSLDG00000006977	rab18a	100	88.293	ENSACAG00000005463	-	94	90.155	Anolis_carolinensis
ENSSLDG00000006977	rab18a	100	96.569	ENSACLG00000011484	rab18a	100	96.569	Astatotilapia_calliptera
ENSSLDG00000006977	rab18a	96	71.144	ENSCPBG00000027619	-	89	74.444	Chrysemys_picta_bellii
ENSSLDG00000006977	rab18a	100	86.893	ENSCPBG00000015839	-	93	89.529	Chrysemys_picta_bellii
ENSSLDG00000006977	rab18a	97	74.874	ENSCING00000006838	-	95	76.720	Ciona_intestinalis
ENSSLDG00000006977	rab18a	97	73.869	ENSCSAVG00000010348	-	97	74.611	Ciona_savignyi
ENSSLDG00000006977	rab18a	100	98.039	ENSCSEG00000011816	rab18a	100	98.039	Cynoglossus_semilaevis
ENSSLDG00000006977	rab18a	96	94.388	ENSCVAG00000015451	rab18a	96	94.388	Cyprinodon_variegatus
ENSSLDG00000006977	rab18a	100	81.951	ENSDARG00000055291	rab18a	92	85.185	Danio_rerio
ENSSLDG00000006977	rab18a	100	94.146	ENSELUG00000003805	rab18a	93	94.764	Esox_lucius
ENSSLDG00000006977	rab18a	96	95.918	ENSFHEG00000019455	rab18a	96	95.918	Fundulus_heteroclitus
ENSSLDG00000006977	rab18a	94	94.764	ENSGAFG00000002790	rab18a	94	94.792	Gambusia_affinis
ENSSLDG00000006977	rab18a	100	86.893	ENSGAGG00000015642	-	93	89.529	Gopherus_agassizii
ENSSLDG00000006977	rab18a	100	96.569	ENSHBUG00000001518	rab18a	100	96.569	Haplochromis_burtoni
ENSSLDG00000006977	rab18a	99	97.537	ENSLBEG00000005861	rab18a	95	97.537	Labrus_bergylta
ENSSLDG00000006977	rab18a	93	90.526	ENSLACG00000009310	rab18a	92	90.526	Latimeria_chalumnae
ENSSLDG00000006977	rab18a	100	90.244	ENSLOCG00000007491	rab18a	93	90.576	Lepisosteus_oculatus
ENSSLDG00000006977	rab18a	100	97.549	ENSMAMG00000014320	rab18a	100	97.549	Mastacembelus_armatus
ENSSLDG00000006977	rab18a	100	96.078	ENSMZEG00005017235	rab18a	94	96.875	Maylandia_zebra
ENSSLDG00000006977	rab18a	100	99.020	ENSMALG00000009813	rab18a	100	99.020	Monopterus_albus
ENSSLDG00000006977	rab18a	100	96.569	ENSNBRG00000013507	rab18a	100	96.569	Neolamprologus_brichardi
ENSSLDG00000006977	rab18a	100	95.098	ENSORLG00000004624	rab18a	100	95.098	Oryzias_latipes
ENSSLDG00000006977	rab18a	100	95.588	ENSORLG00020008333	rab18a	100	95.588	Oryzias_latipes_hni
ENSSLDG00000006977	rab18a	100	95.098	ENSORLG00015004739	rab18a	100	95.098	Oryzias_latipes_hsok
ENSSLDG00000006977	rab18a	100	94.608	ENSOMEG00000020605	rab18a	94	94.792	Oryzias_melastigma
ENSSLDG00000006977	rab18a	100	88.293	ENSPKIG00000009825	rab18a	92	91.534	Paramormyrops_kingsleyae
ENSSLDG00000006977	rab18a	100	93.137	ENSPMGG00000020409	-	94	93.750	Periophthalmus_magnuspinnatus
ENSSLDG00000006977	rab18a	94	95.288	ENSPFOG00000007571	rab18a	94	95.312	Poecilia_formosa
ENSSLDG00000006977	rab18a	94	95.288	ENSPLAG00000010104	rab18a	94	95.312	Poecilia_latipinna
ENSSLDG00000006977	rab18a	94	95.288	ENSPMEG00000013085	rab18a	94	95.312	Poecilia_mexicana
ENSSLDG00000006977	rab18a	94	95.288	ENSPREG00000005923	rab18a	78	95.312	Poecilia_reticulata
ENSSLDG00000006977	rab18a	100	96.569	ENSPNYG00000007064	rab18a	100	96.569	Pundamilia_nyererei
ENSSLDG00000006977	rab18a	99	81.592	ENSPNAG00000011548	rab18a	95	84.211	Pygocentrus_nattereri
ENSSLDG00000006977	rab18a	100	91.707	ENSSFOG00015017444	rab18a	78	92.632	Scleropages_formosus
ENSSLDG00000006977	rab18a	100	96.585	ENSSMAG00000002969	rab18a	100	96.585	Scophthalmus_maximus
ENSSLDG00000006977	rab18a	100	100.000	ENSSDUG00000003823	rab18a	100	100.000	Seriola_dumerili
ENSSLDG00000006977	rab18a	93	90.476	ENSSPUG00000017677	-	92	90.000	Sphenodon_punctatus
ENSSLDG00000006977	rab18a	100	93.627	ENSTRUG00000004984	rab18a	94	93.750	Takifugu_rubripes
ENSSLDG00000006977	rab18a	100	88.835	ENSUMAG00000015574	-	91	92.021	Ursus_maritimus
ENSSLDG00000006977	rab18a	100	89.320	ENSXETG00000004556	rab18	93	91.667	Xenopus_tropicalis
ENSSLDG00000006977	rab18a	94	95.288	ENSXMAG00000024122	rab18a	94	95.312	Xiphophorus_maculatus