EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSLDG00000006981 (Gene tree)
Gene ID
-
Gene Symbol
pabpc1l
Alias
fi20g03|wu:fi20g03|zgc:55855
Full Name
embryonic polyadenylate-binding protein-like
Gene Type
protein_coding
Species
Seriola_lalandi_dorsalis
Status
putative
Strand
Minus strand
Length
8922 bases
Position
chrPEQF01099164.1:640589-649510
Accession
111667171
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSLDP00000008873PABPPF00658.183.5e-2911
ENSSLDP00000008955PABPPF00658.183.8e-2011
ENSSLDP00000008873RRM_5PF13893.65.6e-0812
ENSSLDP00000008873RRM_5PF13893.65.6e-0822
ENSSLDP00000008873RRM_1PF00076.228.7e-8214
ENSSLDP00000008873RRM_1PF00076.228.7e-8224
ENSSLDP00000008873RRM_1PF00076.228.7e-8234
ENSSLDP00000008873RRM_1PF00076.228.7e-8244
ENSSLDP00000008955RRM_1PF00076.227e-8114
ENSSLDP00000008955RRM_1PF00076.227e-8124
ENSSLDP00000008955RRM_1PF00076.227e-8134
ENSSLDP00000008955RRM_1PF00076.227e-8144
ENSSLDP00000008971RRM_1PF00076.226.1e-4512
ENSSLDP00000008971RRM_1PF00076.226.1e-4522
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSLDT00000009169-1587-ENSSLDP00000008873528 (aa)--
ENSSLDT00000009254-1737XM_023422787ENSSLDP00000008955579 (aa)XP_023278555-
ENSSLDT00000009270-729-ENSSLDP00000008971242 (aa)--
Gene Model
Click here to download ENSSLDG00000006981's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000006981's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSLDG00000006981pabpc1l7030.263ENSSLDG00000005260elavl48131.818
ENSSLDG00000006981pabpc1l9878.814ENSSLDG00000011661pabpc1a9873.288
ENSSLDG00000006981pabpc1l6235.227ENSSLDG00000022499elavl1a8835.227
ENSSLDG00000006981pabpc1l9885.167ENSSLDG00000014156pabpc1b9870.638
ENSSLDG00000006981pabpc1l8730.000ENSSLDG00000008455ELAVL29230.534
ENSSLDG00000006981pabpc1l5968.376ENSSLDG00000002735-9469.853
ENSSLDG00000006981pabpc1l8767.164ENSSLDG00000009165-9974.815
ENSSLDG00000006981pabpc1l6734.737ENSSLDG00000020276RBMS35034.737
ENSSLDG00000006981pabpc1l5836.047ENSSLDG00000013940celf3a6736.047
ENSSLDG00000006981pabpc1l7231.298ENSSLDG00000019362-9831.298
ENSSLDG00000006981pabpc1l7432.927ENSSLDG00000013769elavl36932.927
ENSSLDG00000006981pabpc1l5337.209ENSSLDG00000010918-5337.209
ENSSLDG00000006981pabpc1l6931.481ENSSLDG00000014625-9431.481
ENSSLDG00000006981pabpc1l5838.372ENSSLDG00000015995-6336.842
ENSSLDG00000006981pabpc1l7138.372ENSSLDG00000009847celf5a5935.849
ENSSLDG00000006981pabpc1l6330.899ENSSLDG00000015784-5730.899
ENSSLDG00000006981pabpc1l9881.340ENSSLDG00000013025pabpc49668.081
ENSSLDG00000006981pabpc1l6530.435ENSSLDG00000011450tia1l6630.435
ENSSLDG00000006981pabpc1l6639.474ENSSLDG00000025413rbm196139.474
ENSSLDG00000006981pabpc1l5836.047ENSSLDG00000015302celf3b6932.877
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSLDG00000006981pabpc1l9576.712ENSG00000101104PABPC1L9976.235Homo_sapiens
ENSSLDG00000006981pabpc1l9888.584ENSAPOG00000010842pabpc1l9680.699Acanthochromis_polyacanthus
ENSSLDG00000006981pabpc1l9878.995ENSAMEG00000004099PABPC1L9863.535Ailuropoda_melanoleuca
ENSSLDG00000006981pabpc1l9991.971ENSACIG00000021004-9992.445Amphilophus_citrinellus
ENSSLDG00000006981pabpc1l9888.584ENSAOCG00000006167-9783.498Amphiprion_ocellaris
ENSSLDG00000006981pabpc1l9988.372ENSAPEG00000010558-9889.202Amphiprion_percula
ENSSLDG00000006981pabpc1l9894.064ENSATEG00000007428pabpc1l9791.751Anabas_testudineus
ENSSLDG00000006981pabpc1l9586.500ENSAPLG00000008415PABPC1L9878.177Anas_platyrhynchos
ENSSLDG00000006981pabpc1l9888.517ENSACAG00000011841PABPC1L9673.849Anolis_carolinensis
ENSSLDG00000006981pabpc1l9875.799ENSANAG00000026826PABPC1L9973.141Aotus_nancymaae
ENSSLDG00000006981pabpc1l9893.151ENSACLG00000024791pabpc1l9788.284Astatotilapia_calliptera
ENSSLDG00000006981pabpc1l9887.946ENSAMXG00000013552pabpc1l9880.963Astyanax_mexicanus
ENSSLDG00000006981pabpc1l8374.074ENSBTAG00000016849PABPC1L7574.074Bos_taurus
ENSSLDG00000006981pabpc1l6988.095ENSBTAG00000055300-10088.095Bos_taurus
ENSSLDG00000006981pabpc1l9875.799ENSCJAG00000017628PABPC1L9973.141Callithrix_jacchus
ENSSLDG00000006981pabpc1l7179.310ENSCJAG00000038506-10079.310Callithrix_jacchus
ENSSLDG00000006981pabpc1l9879.452ENSCAFG00000009573PABPC1L9971.954Canis_familiaris
ENSSLDG00000006981pabpc1l9878.995ENSCAFG00020013828PABPC1L9874.760Canis_lupus_dingo
ENSSLDG00000006981pabpc1l9882.297ENSCHIG00000025759PABPC1L9075.240Capra_hircus
ENSSLDG00000006981pabpc1l9879.904ENSTSYG00000006645PABPC1L9973.861Carlito_syrichta
ENSSLDG00000006981pabpc1l9469.377ENSCAPG00000014519PABPC1L9662.928Cavia_aperea
ENSSLDG00000006981pabpc1l9573.973ENSCPOG00000013633PABPC1L9971.053Cavia_porcellus
ENSSLDG00000006981pabpc1l9575.342ENSCCAG00000023338PABPC1L9872.422Cebus_capucinus
ENSSLDG00000006981pabpc1l9877.169ENSCATG00000034065PABPC1L9873.861Cercocebus_atys
ENSSLDG00000006981pabpc1l9572.603ENSCLAG00000005298PABPC1L9664.073Chinchilla_lanigera
ENSSLDG00000006981pabpc1l9876.712ENSCSAG00000014242PABPC1L9873.621Chlorocebus_sabaeus
ENSSLDG00000006981pabpc1l9887.560ENSCPBG00000017755-9387.560Chrysemys_picta_bellii
ENSSLDG00000006981pabpc1l6583.206ENSCPBG00000007810-9183.206Chrysemys_picta_bellii
ENSSLDG00000006981pabpc1l8073.563ENSCING00000002796-7573.563Ciona_intestinalis
ENSSLDG00000006981pabpc1l9374.057ENSCSAVG00000003102-10082.550Ciona_savignyi
ENSSLDG00000006981pabpc1l9976.667ENSCSAVG00000004246-9664.548Ciona_savignyi
ENSSLDG00000006981pabpc1l9877.169ENSCANG00000037530PABPC1L9665.025Colobus_angolensis_palliatus
ENSSLDG00000006981pabpc1l9671.233ENSCGRG00001021938Pabpc1l9963.696Cricetulus_griseus_chok1gshd
ENSSLDG00000006981pabpc1l9671.233ENSCGRG00000007946Pabpc1l9963.696Cricetulus_griseus_crigri
ENSSLDG00000006981pabpc1l9692.718ENSCSEG00000021295pabpc1l9881.121Cynoglossus_semilaevis
ENSSLDG00000006981pabpc1l9892.237ENSCVAG00000015943-9996.183Cyprinodon_variegatus
ENSSLDG00000006981pabpc1l9991.827ENSDARG00000002597pabpc1l9095.385Danio_rerio
ENSSLDG00000006981pabpc1l9877.626ENSDNOG00000048450PABPC1L9975.060Dasypus_novemcinctus
ENSSLDG00000006981pabpc1l9874.886ENSDORG00000001067Pabpc1l9871.635Dipodomys_ordii
ENSSLDG00000006981pabpc1l9676.423ENSETEG00000009969PABPC1L6876.423Echinops_telfairi
ENSSLDG00000006981pabpc1l6862.927ENSEASG00005023407-8162.927Equus_asinus_asinus
ENSSLDG00000006981pabpc1l6986.905ENSEASG00005023408-10086.905Equus_asinus_asinus
ENSSLDG00000006981pabpc1l7767.965ENSECAG00000040139-8170.404Equus_caballus
ENSSLDG00000006981pabpc1l9876.256ENSEEUG00000005978PABPC1L9666.948Erinaceus_europaeus
ENSSLDG00000006981pabpc1l9889.498ENSELUG00000001811pabpc1l9885.071Esox_lucius
ENSSLDG00000006981pabpc1l9878.539ENSFCAG00000011692PABPC1L9875.240Felis_catus
ENSSLDG00000006981pabpc1l9886.603ENSFALG00000005372PABPC1L9966.610Ficedula_albicollis
ENSSLDG00000006981pabpc1l9576.555ENSFDAG00000008291PABPC1L9963.345Fukomys_damarensis
ENSSLDG00000006981pabpc1l9893.151ENSFHEG00000003398pabpc1l9786.356Fundulus_heteroclitus
ENSSLDG00000006981pabpc1l9893.780ENSGMOG00000004437pabpc1l10085.673Gadus_morhua
ENSSLDG00000006981pabpc1l9886.603ENSGALG00000004123PABPC1L9886.603Gallus_gallus
ENSSLDG00000006981pabpc1l9489.773ENSGAFG00000021057pabpc1l9780.251Gambusia_affinis
ENSSLDG00000006981pabpc1l9895.694ENSGACG00000002792pabpc1l9993.494Gasterosteus_aculeatus
ENSSLDG00000006981pabpc1l9888.038ENSGAGG00000000589PABPC1L9776.606Gopherus_agassizii
ENSSLDG00000006981pabpc1l9576.712ENSGGOG00000004584PABPC1L9873.621Gorilla_gorilla
ENSSLDG00000006981pabpc1l9893.151ENSHBUG00000006134pabpc1l9788.119Haplochromis_burtoni
ENSSLDG00000006981pabpc1l9576.555ENSHGLG00000008434PABPC1L9971.223Heterocephalus_glaber_female
ENSSLDG00000006981pabpc1l9576.555ENSHGLG00100012151PABPC1L9971.223Heterocephalus_glaber_male
ENSSLDG00000006981pabpc1l7485.393ENSHGLG00100019506-10085.393Heterocephalus_glaber_male
ENSSLDG00000006981pabpc1l9894.258ENSHCOG00000009270pabpc1l9990.261Hippocampus_comes
ENSSLDG00000006981pabpc1l5459.231ENSIPUG00000005537-10059.231Ictalurus_punctatus
ENSSLDG00000006981pabpc1l7459.777ENSIPUG00000006780-9256.250Ictalurus_punctatus
ENSSLDG00000006981pabpc1l7559.669ENSIPUG00000006760-9159.669Ictalurus_punctatus
ENSSLDG00000006981pabpc1l9886.607ENSIPUG00000012602pabpc1l9881.579Ictalurus_punctatus
ENSSLDG00000006981pabpc1l9875.799ENSSTOG00000003739PABPC1L9973.861Ictidomys_tridecemlineatus
ENSSLDG00000006981pabpc1l9453.904ENSJJAG00000022406Pabpc1l9953.652Jaculus_jaculus
ENSSLDG00000006981pabpc1l9992.694ENSKMAG00000016847pabpc1l9788.176Kryptolebias_marmoratus
ENSSLDG00000006981pabpc1l9892.694ENSLBEG00000010084pabpc1l9787.294Labrus_bergylta
ENSSLDG00000006981pabpc1l9888.517ENSLACG00000005762PABPC1L9877.449Latimeria_chalumnae
ENSSLDG00000006981pabpc1l9993.780ENSLOCG00000007519pabpc1l9783.218Lepisosteus_oculatus
ENSSLDG00000006981pabpc1l9579.904ENSLAFG00000003553PABPC1L9972.917Loxodonta_africana
ENSSLDG00000006981pabpc1l9877.169ENSMFAG00000040365PABPC1L9873.861Macaca_fascicularis
ENSSLDG00000006981pabpc1l9877.169ENSMNEG00000032298PABPC1L9873.861Macaca_nemestrina
ENSSLDG00000006981pabpc1l9877.169ENSMLEG00000043139PABPC1L9873.861Mandrillus_leucophaeus
ENSSLDG00000006981pabpc1l10091.275ENSMAMG00000011854pabpc1l9795.422Mastacembelus_armatus
ENSSLDG00000006981pabpc1l9893.151ENSMZEG00005023713pabpc1l9788.284Maylandia_zebra
ENSSLDG00000006981pabpc1l9887.081ENSMGAG00000003674PABPC1L9777.885Meleagris_gallopavo
ENSSLDG00000006981pabpc1l9870.776ENSMOCG00000013186Pabpc1l9967.797Microtus_ochrogaster
ENSSLDG00000006981pabpc1l9890.868ENSMMOG00000020574-9096.154Mola_mola
ENSSLDG00000006981pabpc1l9884.211ENSMODG00000016198PABPC1L9874.702Monodelphis_domestica
ENSSLDG00000006981pabpc1l9891.781ENSMALG00000021622pabpc1l9993.735Monopterus_albus
ENSSLDG00000006981pabpc1l9869.863MGP_CAROLIEiJ_G0024627Pabpc1l9760.531Mus_caroli
ENSSLDG00000006981pabpc1l9869.863ENSMUSG00000054582Pabpc1l9760.531Mus_musculus
ENSSLDG00000006981pabpc1l9869.863MGP_PahariEiJ_G0026071Pabpc1l9760.935Mus_pahari
ENSSLDG00000006981pabpc1l9869.863MGP_SPRETEiJ_G0025549Pabpc1l9760.531Mus_spretus
ENSSLDG00000006981pabpc1l9878.539ENSMPUG00000017646PABPC1L9875.721Mustela_putorius_furo
ENSSLDG00000006981pabpc1l9879.904ENSMLUG00000006324PABPC1L9669.683Myotis_lucifugus
ENSSLDG00000006981pabpc1l9871.689ENSNGAG00000010458Pabpc1l9968.825Nannospalax_galili
ENSSLDG00000006981pabpc1l9993.659ENSNBRG00000016633pabpc1l9994.165Neolamprologus_brichardi
ENSSLDG00000006981pabpc1l9881.340ENSMEUG00000007905-8965.693Notamacropus_eugenii
ENSSLDG00000006981pabpc1l9874.886ENSOPRG00000011846PABPC1L9873.861Ochotona_princeps
ENSSLDG00000006981pabpc1l9974.429ENSODEG00000015482PABPC1L9962.063Octodon_degus
ENSSLDG00000006981pabpc1l6187.500ENSODEG00000002920-9778.750Octodon_degus
ENSSLDG00000006981pabpc1l9993.151ENSONIG00000017314pabpc1l9788.449Oreochromis_niloticus
ENSSLDG00000006981pabpc1l9884.000ENSOANG00000015793-9962.050Ornithorhynchus_anatinus
ENSSLDG00000006981pabpc1l9077.169ENSOCUG00000003005PABPC1L9863.736Oryctolagus_cuniculus
ENSSLDG00000006981pabpc1l9891.121ENSORLG00000010322pabpc1l9990.562Oryzias_latipes
ENSSLDG00000006981pabpc1l9891.121ENSORLG00020021193pabpc1l9990.562Oryzias_latipes_hni
ENSSLDG00000006981pabpc1l9891.121ENSORLG00015017018pabpc1l9990.361Oryzias_latipes_hsok
ENSSLDG00000006981pabpc1l9488.372ENSOMEG00000010789pabpc1l9780.630Oryzias_melastigma
ENSSLDG00000006981pabpc1l9875.799ENSOGAG00000032999PABPC1L9873.558Otolemur_garnettii
ENSSLDG00000006981pabpc1l9878.995ENSOARG00000004578PABPC1L9871.783Ovis_aries
ENSSLDG00000006981pabpc1l9577.169ENSPPAG00000039677PABPC1L9873.861Pan_paniscus
ENSSLDG00000006981pabpc1l9078.539ENSPPRG00000019327-9778.539Panthera_pardus
ENSSLDG00000006981pabpc1l9578.404ENSPTIG00000006524PABPC1L9975.240Panthera_tigris_altaica
ENSSLDG00000006981pabpc1l9077.169ENSPTRG00000013531PABPC1L9976.543Pan_troglodytes
ENSSLDG00000006981pabpc1l9877.169ENSPANG00000018788PABPC1L9873.861Papio_anubis
ENSSLDG00000006981pabpc1l5784.906ENSPKIG00000016810-9383.206Paramormyrops_kingsleyae
ENSSLDG00000006981pabpc1l9991.388ENSPKIG00000007322pabpc1l9883.693Paramormyrops_kingsleyae
ENSSLDG00000006981pabpc1l9888.038ENSPSIG00000013289PABPC1L9888.038Pelodiscus_sinensis
ENSSLDG00000006981pabpc1l9189.140ENSPMGG00000023117pabpc1l9995.455Periophthalmus_magnuspinnatus
ENSSLDG00000006981pabpc1l6588.083ENSPMGG00000023121-9088.083Periophthalmus_magnuspinnatus
ENSSLDG00000006981pabpc1l9468.106ENSPEMG00000020671Pabpc1l9660.797Peromyscus_maniculatus_bairdii
ENSSLDG00000006981pabpc1l9893.151ENSPFOG00000013241pabpc1l9785.149Poecilia_formosa
ENSSLDG00000006981pabpc1l6899.048ENSPLAG00000023686-9298.462Poecilia_latipinna
ENSSLDG00000006981pabpc1l9893.151ENSPLAG00000017490-9887.218Poecilia_latipinna
ENSSLDG00000006981pabpc1l6899.048ENSPMEG00000009185-8898.462Poecilia_mexicana
ENSSLDG00000006981pabpc1l9893.151ENSPMEG00000007677pabpc1l9785.265Poecilia_mexicana
ENSSLDG00000006981pabpc1l9893.607ENSPREG00000015886pabpc1l10093.607Poecilia_reticulata
ENSSLDG00000006981pabpc1l9876.712ENSPPYG00000011042PABPC1L9873.621Pongo_abelii
ENSSLDG00000006981pabpc1l9885.938ENSPCAG00000011787-7585.938Procavia_capensis
ENSSLDG00000006981pabpc1l9876.712ENSPCOG00000020630PABPC1L9874.101Propithecus_coquereli
ENSSLDG00000006981pabpc1l9879.452ENSPVAG00000012663PABPC1L9873.494Pteropus_vampyrus
ENSSLDG00000006981pabpc1l10093.151ENSPNYG00000004101pabpc1l9994.366Pundamilia_nyererei
ENSSLDG00000006981pabpc1l9987.946ENSPNAG00000021248pabpc1l9771.689Pygocentrus_nattereri
ENSSLDG00000006981pabpc1l9072.249ENSRNOG00000012750Pabpc1l9867.626Rattus_norvegicus
ENSSLDG00000006981pabpc1l9876.712ENSRBIG00000035381PABPC1L9873.621Rhinopithecus_bieti
ENSSLDG00000006981pabpc1l9876.256ENSRROG00000044498PABPC1L9873.381Rhinopithecus_roxellana
ENSSLDG00000006981pabpc1l9876.256ENSSBOG00000009532-9972.902Saimiri_boliviensis_boliviensis
ENSSLDG00000006981pabpc1l9574.074ENSSHAG00000011446PABPC1L10070.607Sarcophilus_harrisii
ENSSLDG00000006981pabpc1l9994.444ENSSFOG00015017304pabpc1l9777.521Scleropages_formosus
ENSSLDG00000006981pabpc1l9896.635ENSSMAG00000010516pabpc1l9498.077Scophthalmus_maximus
ENSSLDG00000006981pabpc1l9896.347ENSSDUG00000014743pabpc1l9899.036Seriola_dumerili
ENSSLDG00000006981pabpc1l9886.124ENSSPUG00000004233PABPC1L9671.546Sphenodon_punctatus
ENSSLDG00000006981pabpc1l9889.041ENSSPAG00000017137pabpc1l9883.523Stegastes_partitus
ENSSLDG00000006981pabpc1l9881.340ENSSSCG00000007382PABPC1L9871.719Sus_scrofa
ENSSLDG00000006981pabpc1l9887.560ENSTGUG00000005114PABPC1L9874.330Taeniopygia_guttata
ENSSLDG00000006981pabpc1l9991.781ENSTRUG00000011085pabpc1l9690.931Takifugu_rubripes
ENSSLDG00000006981pabpc1l10083.003ENSTNIG00000017903pabpc1l9486.967Tetraodon_nigroviridis
ENSSLDG00000006981pabpc1l9677.055ENSTBEG00000002851PABPC1L7677.055Tupaia_belangeri
ENSSLDG00000006981pabpc1l9575.000ENSTTRG00000007618PABPC1L10066.667Tursiops_truncatus
ENSSLDG00000006981pabpc1l9878.539ENSUAMG00000017682PABPC1L9868.288Ursus_americanus
ENSSLDG00000006981pabpc1l9572.050ENSUMAG00000025436PABPC1L9472.460Ursus_maritimus
ENSSLDG00000006981pabpc1l9682.297ENSVVUG00000018939PABPC1L9576.285Vulpes_vulpes
ENSSLDG00000006981pabpc1l9987.560ENSXETG00000022831pabpc1l9669.421Xenopus_tropicalis
ENSSLDG00000006981pabpc1l9892.694ENSXCOG00000005459pabpc1l9993.617Xiphophorus_couchianus
ENSSLDG00000006981pabpc1l9892.694ENSXMAG00000017135pabpc1l9886.090Xiphophorus_maculatus

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