EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000006994 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: oocyte zinc finger protein XlCOF28-like
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 8356 bases
Position: chrPEQF01098803.1:228583-236938
Accession: 111655542
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000008808	zf-C2H2	PF00096.26	3.5e-67	1	13
ENSSLDP00000008808	zf-C2H2	PF00096.26	3.5e-67	2	13
ENSSLDP00000008808	zf-C2H2	PF00096.26	3.5e-67	3	13
ENSSLDP00000008808	zf-C2H2	PF00096.26	3.5e-67	4	13
ENSSLDP00000008808	zf-C2H2	PF00096.26	3.5e-67	5	13
ENSSLDP00000008808	zf-C2H2	PF00096.26	3.5e-67	6	13
ENSSLDP00000008808	zf-C2H2	PF00096.26	3.5e-67	7	13
ENSSLDP00000008808	zf-C2H2	PF00096.26	3.5e-67	8	13
ENSSLDP00000008808	zf-C2H2	PF00096.26	3.5e-67	9	13
ENSSLDP00000008808	zf-C2H2	PF00096.26	3.5e-67	10	13
ENSSLDP00000008808	zf-C2H2	PF00096.26	3.5e-67	11	13
ENSSLDP00000008808	zf-C2H2	PF00096.26	3.5e-67	12	13
ENSSLDP00000008808	zf-C2H2	PF00096.26	3.5e-67	13	13
ENSSLDP00000008847	zf-C2H2	PF00096.26	4.2e-66	1	12
ENSSLDP00000008847	zf-C2H2	PF00096.26	4.2e-66	2	12
ENSSLDP00000008847	zf-C2H2	PF00096.26	4.2e-66	3	12
ENSSLDP00000008847	zf-C2H2	PF00096.26	4.2e-66	4	12
ENSSLDP00000008847	zf-C2H2	PF00096.26	4.2e-66	5	12
ENSSLDP00000008847	zf-C2H2	PF00096.26	4.2e-66	6	12
ENSSLDP00000008847	zf-C2H2	PF00096.26	4.2e-66	7	12
ENSSLDP00000008847	zf-C2H2	PF00096.26	4.2e-66	8	12
ENSSLDP00000008847	zf-C2H2	PF00096.26	4.2e-66	9	12
ENSSLDP00000008847	zf-C2H2	PF00096.26	4.2e-66	10	12
ENSSLDP00000008847	zf-C2H2	PF00096.26	4.2e-66	11	12
ENSSLDP00000008847	zf-C2H2	PF00096.26	4.2e-66	12	12
ENSSLDP00000008808	zf-met	PF12874.7	4.7e-23	1	3
ENSSLDP00000008808	zf-met	PF12874.7	4.7e-23	2	3
ENSSLDP00000008808	zf-met	PF12874.7	4.7e-23	3	3
ENSSLDP00000008847	zf-met	PF12874.7	1.9e-19	1	3
ENSSLDP00000008847	zf-met	PF12874.7	1.9e-19	2	3
ENSSLDP00000008847	zf-met	PF12874.7	1.9e-19	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000009142	-	3405	XM_023406989	ENSSLDP00000008847	694 (aa)	XP_023262757	UPI000C6F93A4
ENSSLDT00000009101	-	1473	-	ENSSLDP00000008808	490 (aa)	-	-

Gene Model

Click here to download ENSSLDG00000006994's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000006994's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000006994	-	61	56.522	ENSSLDG00000002284	-	88	56.522
ENSSLDG00000006994	-	95	31.200	ENSSLDG00000004428	PRDM15	54	33.537
ENSSLDG00000006994	-	67	45.333	ENSSLDG00000012415	si:dkey-89b17.4	65	45.333
ENSSLDG00000006994	-	97	47.458	ENSSLDG00000021127	-	67	47.458
ENSSLDG00000006994	-	91	39.423	ENSSLDG00000016454	-	69	39.423
ENSSLDG00000006994	-	93	47.445	ENSSLDG00000001850	-	59	47.445
ENSSLDG00000006994	-	97	41.102	ENSSLDG00000005839	-	72	48.795
ENSSLDG00000006994	-	93	31.447	ENSSLDG00000005670	-	92	40.860
ENSSLDG00000006994	-	93	55.357	ENSSLDG00000005850	-	98	55.357
ENSSLDG00000006994	-	83	43.519	ENSSLDG00000007568	-	86	43.519
ENSSLDG00000006994	-	94	42.857	ENSSLDG00000020163	gfi1ab	52	42.857
ENSSLDG00000006994	-	93	47.191	ENSSLDG00000009821	-	90	49.398
ENSSLDG00000006994	-	96	40.994	ENSSLDG00000013170	zbtb17	93	50.602
ENSSLDG00000006994	-	96	41.346	ENSSLDG00000020432	-	94	43.017
ENSSLDG00000006994	-	95	37.500	ENSSLDG00000019660	znf341	64	32.057
ENSSLDG00000006994	-	79	40.741	ENSSLDG00000004005	-	78	41.758
ENSSLDG00000006994	-	94	38.889	ENSSLDG00000023661	-	94	40.606
ENSSLDG00000006994	-	97	50.000	ENSSLDG00000010190	-	80	50.000
ENSSLDG00000006994	-	95	44.068	ENSSLDG00000006288	-	93	52.941
ENSSLDG00000006994	-	96	35.659	ENSSLDG00000023060	-	74	47.024
ENSSLDG00000006994	-	94	46.087	ENSSLDG00000000859	-	93	44.000
ENSSLDG00000006994	-	96	36.420	ENSSLDG00000014166	znf319b	82	43.478
ENSSLDG00000006994	-	95	47.727	ENSSLDG00000001860	-	82	49.180
ENSSLDG00000006994	-	94	42.029	ENSSLDG00000024295	ZNF319	86	42.029
ENSSLDG00000006994	-	93	48.515	ENSSLDG00000012133	-	96	49.333
ENSSLDG00000006994	-	95	42.803	ENSSLDG00000016317	-	85	45.029
ENSSLDG00000006994	-	94	42.157	ENSSLDG00000007524	-	83	44.099
ENSSLDG00000006994	-	96	39.700	ENSSLDG00000004485	-	69	42.945
ENSSLDG00000006994	-	88	38.462	ENSSLDG00000017166	scrt1b	70	38.462
ENSSLDG00000006994	-	92	50.442	ENSSLDG00000000432	-	88	50.442
ENSSLDG00000006994	-	70	30.317	ENSSLDG00000015796	-	76	30.317
ENSSLDG00000006994	-	94	47.863	ENSSLDG00000006724	-	93	47.863
ENSSLDG00000006994	-	98	39.753	ENSSLDG00000020675	-	96	45.255
ENSSLDG00000006994	-	92	44.776	ENSSLDG00000005999	-	54	45.390
ENSSLDG00000006994	-	97	46.988	ENSSLDG00000012821	znf236	78	46.988
ENSSLDG00000006994	-	80	42.105	ENSSLDG00000011412	snai1a	60	42.105
ENSSLDG00000006994	-	98	45.038	ENSSLDG00000013760	-	96	47.159
ENSSLDG00000006994	-	94	34.615	ENSSLDG00000018686	hinfp	51	34.615
ENSSLDG00000006994	-	96	43.056	ENSSLDG00000011849	-	76	43.056
ENSSLDG00000006994	-	95	39.855	ENSSLDG00000016301	-	97	49.689
ENSSLDG00000006994	-	93	51.111	ENSSLDG00000020455	-	85	48.810
ENSSLDG00000006994	-	95	37.681	ENSSLDG00000000464	-	64	41.463
ENSSLDG00000006994	-	97	44.000	ENSSLDG00000018598	-	98	46.988
ENSSLDG00000006994	-	96	35.294	ENSSLDG00000013353	prdm5	82	41.964
ENSSLDG00000006994	-	96	44.538	ENSSLDG00000000376	-	82	44.167
ENSSLDG00000006994	-	94	51.351	ENSSLDG00000000352	-	70	51.351
ENSSLDG00000006994	-	96	48.148	ENSSLDG00000025265	znf526	90	48.148
ENSSLDG00000006994	-	96	48.485	ENSSLDG00000004098	-	95	48.485
ENSSLDG00000006994	-	99	39.759	ENSSLDG00000009061	-	92	40.000
ENSSLDG00000006994	-	83	49.635	ENSSLDG00000006217	-	76	50.000
ENSSLDG00000006994	-	94	46.591	ENSSLDG00000018493	-	86	46.591
ENSSLDG00000006994	-	95	39.394	ENSSLDG00000015116	-	78	47.561
ENSSLDG00000006994	-	93	38.849	ENSSLDG00000001787	zbtb24	96	48.276
ENSSLDG00000006994	-	94	36.634	ENSSLDG00000000457	-	75	40.805
ENSSLDG00000006994	-	82	55.046	ENSSLDG00000020990	-	56	55.046
ENSSLDG00000006994	-	92	44.361	ENSSLDG00000013823	gfi1b	71	44.361
ENSSLDG00000006994	-	95	40.870	ENSSLDG00000014177	zbtb47b	80	40.870
ENSSLDG00000006994	-	95	45.749	ENSSLDG00000017937	-	96	48.077
ENSSLDG00000006994	-	92	39.130	ENSSLDG00000014465	-	86	39.130
ENSSLDG00000006994	-	83	49.485	ENSSLDG00000009582	-	96	55.696
ENSSLDG00000006994	-	97	33.910	ENSSLDG00000003269	znf710b	54	41.667
ENSSLDG00000006994	-	96	42.205	ENSSLDG00000012036	-	96	48.485
ENSSLDG00000006994	-	92	46.269	ENSSLDG00000002756	-	79	46.269
ENSSLDG00000006994	-	93	43.548	ENSSLDG00000004756	-	92	43.548
ENSSLDG00000006994	-	94	47.273	ENSSLDG00000010390	-	89	47.273
ENSSLDG00000006994	-	91	41.905	ENSSLDG00000012852	snai2	56	41.905
ENSSLDG00000006994	-	99	45.000	ENSSLDG00000012320	-	98	50.549
ENSSLDG00000006994	-	91	38.158	ENSSLDG00000014436	-	76	38.065
ENSSLDG00000006994	-	97	36.264	ENSSLDG00000018521	znf646	90	36.264
ENSSLDG00000006994	-	92	42.466	ENSSLDG00000020655	-	60	46.626
ENSSLDG00000006994	-	95	47.083	ENSSLDG00000008645	-	99	47.083
ENSSLDG00000006994	-	94	46.000	ENSSLDG00000021278	-	64	46.951
ENSSLDG00000006994	-	96	45.492	ENSSLDG00000007756	-	95	51.961
ENSSLDG00000006994	-	94	37.313	ENSSLDG00000017718	zbtb48	61	37.313
ENSSLDG00000006994	-	82	50.877	ENSSLDG00000018033	-	76	51.064
ENSSLDG00000006994	-	98	44.444	ENSSLDG00000020727	-	96	52.381
ENSSLDG00000006994	-	77	38.961	ENSSLDG00000021177	zbtb41	54	38.961
ENSSLDG00000006994	-	95	45.522	ENSSLDG00000025676	-	55	45.522
ENSSLDG00000006994	-	77	48.000	ENSSLDG00000000202	-	74	55.696
ENSSLDG00000006994	-	95	51.786	ENSSLDG00000000203	-	96	50.685
ENSSLDG00000006994	-	97	42.361	ENSSLDG00000018273	-	87	42.361
ENSSLDG00000006994	-	84	42.308	ENSSLDG00000017614	-	97	42.308
ENSSLDG00000006994	-	96	46.154	ENSSLDG00000002515	-	70	53.659
ENSSLDG00000006994	-	83	47.541	ENSSLDG00000015049	-	98	47.541
ENSSLDG00000006994	-	94	34.052	ENSSLDG00000002776	-	69	46.053
ENSSLDG00000006994	-	83	49.635	ENSSLDG00000005868	-	78	50.000
ENSSLDG00000006994	-	84	39.806	ENSSLDG00000025359	-	72	38.393

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000006994	-	97	95.238	ENSAPOG00000002213	-	94	95.238	Acanthochromis_polyacanthus
ENSSLDG00000006994	-	94	48.077	ENSACIG00000013149	-	87	39.899	Amphilophus_citrinellus
ENSSLDG00000006994	-	96	90.909	ENSACIG00000013163	-	95	90.909	Amphilophus_citrinellus
ENSSLDG00000006994	-	97	95.238	ENSAOCG00000013124	-	99	87.032	Amphiprion_ocellaris
ENSSLDG00000006994	-	98	95.238	ENSAPEG00000009997	-	99	87.446	Amphiprion_percula
ENSSLDG00000006994	-	99	97.222	ENSATEG00000004127	-	95	97.468	Anabas_testudineus
ENSSLDG00000006994	-	97	93.836	ENSACLG00000005708	-	94	93.836	Astatotilapia_calliptera
ENSSLDG00000006994	-	96	88.235	ENSCVAG00000014734	-	98	76.119	Cyprinodon_variegatus
ENSSLDG00000006994	-	85	93.939	ENSFHEG00000014060	-	67	93.939	Fundulus_heteroclitus
ENSSLDG00000006994	-	90	70.462	ENSGMOG00000017526	-	97	70.462	Gadus_morhua
ENSSLDG00000006994	-	95	94.118	ENSGAFG00000011174	-	91	94.118	Gambusia_affinis
ENSSLDG00000006994	-	97	89.098	ENSGACG00000019550	-	100	89.098	Gasterosteus_aculeatus
ENSSLDG00000006994	-	97	93.836	ENSHBUG00000006662	-	94	93.836	Haplochromis_burtoni
ENSSLDG00000006994	-	96	85.455	ENSHCOG00000003041	-	97	83.566	Hippocampus_comes
ENSSLDG00000006994	-	99	91.060	ENSKMAG00000009979	-	92	89.796	Kryptolebias_marmoratus
ENSSLDG00000006994	-	100	85.079	ENSLBEG00000010165	-	97	93.133	Labrus_bergylta
ENSSLDG00000006994	-	90	97.692	ENSMAMG00000006312	-	99	97.692	Mastacembelus_armatus
ENSSLDG00000006994	-	97	93.836	ENSMZEG00005013913	-	94	93.836	Maylandia_zebra
ENSSLDG00000006994	-	94	95.257	ENSMMOG00000011282	-	93	95.572	Mola_mola
ENSSLDG00000006994	-	96	95.833	ENSMALG00000000494	-	99	88.167	Monopterus_albus
ENSSLDG00000006994	-	97	64.151	ENSNBRG00000007602	-	97	90.452	Neolamprologus_brichardi
ENSSLDG00000006994	-	99	55.809	ENSONIG00000003856	-	100	58.687	Oreochromis_niloticus
ENSSLDG00000006994	-	98	87.162	ENSORLG00000010117	-	95	87.162	Oryzias_latipes
ENSSLDG00000006994	-	98	87.162	ENSORLG00020000219	-	95	87.162	Oryzias_latipes_hni
ENSSLDG00000006994	-	94	91.860	ENSORLG00015000258	-	98	93.750	Oryzias_latipes_hsok
ENSSLDG00000006994	-	98	86.486	ENSOMEG00000018262	-	96	90.875	Oryzias_melastigma
ENSSLDG00000006994	-	90	87.302	ENSPFOG00000013455	-	99	87.302	Poecilia_formosa
ENSSLDG00000006994	-	95	94.495	ENSPLAG00000004027	-	89	88.000	Poecilia_latipinna
ENSSLDG00000006994	-	95	94.118	ENSPMEG00000007589	-	91	94.118	Poecilia_mexicana
ENSSLDG00000006994	-	88	96.154	ENSPREG00000000153	-	89	96.154	Poecilia_reticulata
ENSSLDG00000006994	-	97	95.804	ENSPNYG00000007814	-	95	95.804	Pundamilia_nyererei
ENSSLDG00000006994	-	96	45.522	ENSPNYG00000007781	-	99	41.520	Pundamilia_nyererei
ENSSLDG00000006994	-	97	95.364	ENSSMAG00000021251	-	100	94.604	Scophthalmus_maximus
ENSSLDG00000006994	-	100	99.424	ENSSDUG00000013904	-	100	99.424	Seriola_dumerili
ENSSLDG00000006994	-	98	93.878	ENSSPAG00000011524	-	99	88.295	Stegastes_partitus
ENSSLDG00000006994	-	94	89.123	ENSTRUG00000015687	-	97	92.308	Takifugu_rubripes
ENSSLDG00000006994	-	86	92.664	ENSTNIG00000008242	-	100	92.664	Tetraodon_nigroviridis
ENSSLDG00000006994	-	98	80.174	ENSXCOG00000015947	-	98	93.233	Xiphophorus_couchianus
ENSSLDG00000006994	-	95	94.118	ENSXMAG00000023291	-	92	93.985	Xiphophorus_maculatus