EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSLDG00000007044 (Gene tree)
Gene ID: -
Gene Symbol: bxdc2
Alias: -
Full Name: BRX1%2C biogenesis of ribosomes
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 5708 bases
Position: chrPEQF01099085.1:358754-364461
Accession: 111664824
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000008907	Brix	PF04427.18	5.8e-41	1	1
ENSSLDP00000008930	Brix	PF04427.18	1.9e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000009204	-	3907	XM_023419606	ENSSLDP00000008907	342 (aa)	XP_023275374	UPI000C6F7566
ENSSLDT00000009227	-	1035	-	ENSSLDP00000008930	344 (aa)	-	-

Gene Model

Click here to download ENSSLDG00000007044's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000007044's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000007044	bxdc2	98	73.900	ENSG00000113460	BRIX1	97	73.761	Homo_sapiens
ENSSLDG00000007044	bxdc2	100	86.880	ENSAPOG00000020334	bxdc2	100	87.172	Acanthochromis_polyacanthus
ENSSLDG00000007044	bxdc2	98	74.194	ENSAMEG00000003295	BRIX1	97	74.487	Ailuropoda_melanoleuca
ENSSLDG00000007044	bxdc2	100	84.548	ENSACIG00000017003	bxdc2	100	85.131	Amphilophus_citrinellus
ENSSLDG00000007044	bxdc2	100	88.596	ENSAOCG00000000941	bxdc2	100	88.596	Amphiprion_ocellaris
ENSSLDG00000007044	bxdc2	100	88.596	ENSAPEG00000017124	bxdc2	100	88.596	Amphiprion_percula
ENSSLDG00000007044	bxdc2	100	89.796	ENSATEG00000016635	bxdc2	100	89.796	Anabas_testudineus
ENSSLDG00000007044	bxdc2	84	72.822	ENSAPLG00000006647	BRIX1	97	72.822	Anas_platyrhynchos
ENSSLDG00000007044	bxdc2	94	73.832	ENSACAG00000008586	BRIX1	97	71.221	Anolis_carolinensis
ENSSLDG00000007044	bxdc2	98	67.449	ENSANAG00000010505	-	96	67.449	Aotus_nancymaae
ENSSLDG00000007044	bxdc2	98	71.510	ENSANAG00000022329	-	97	71.671	Aotus_nancymaae
ENSSLDG00000007044	bxdc2	100	86.257	ENSACLG00000005213	bxdc2	100	86.257	Astatotilapia_calliptera
ENSSLDG00000007044	bxdc2	89	80.065	ENSAMXG00000043121	bxdc2	97	75.439	Astyanax_mexicanus
ENSSLDG00000007044	bxdc2	98	74.344	ENSBTAG00000019211	BRIX1	97	74.052	Bos_taurus
ENSSLDG00000007044	bxdc2	74	49.027	WBGene00019678	K12H4.3	82	46.021	Caenorhabditis_elegans
ENSSLDG00000007044	bxdc2	98	71.554	ENSCJAG00000007390	-	97	72.012	Callithrix_jacchus
ENSSLDG00000007044	bxdc2	98	73.607	ENSCJAG00000018506	-	97	74.052	Callithrix_jacchus
ENSSLDG00000007044	bxdc2	98	71.429	ENSCAFG00000018797	BRIX1	97	71.137	Canis_familiaris
ENSSLDG00000007044	bxdc2	98	66.472	ENSCAFG00020016783	BRIX1	96	66.181	Canis_lupus_dingo
ENSSLDG00000007044	bxdc2	98	68.966	ENSCHIG00000015024	BRIX1	97	70.262	Capra_hircus
ENSSLDG00000007044	bxdc2	98	73.977	ENSTSYG00000002898	BRIX1	97	73.977	Carlito_syrichta
ENSSLDG00000007044	bxdc2	84	64.236	ENSCAPG00000009776	BRIX1	95	64.236	Cavia_aperea
ENSSLDG00000007044	bxdc2	86	79.322	ENSCPOG00000022064	BRIX1	88	77.961	Cavia_porcellus
ENSSLDG00000007044	bxdc2	98	73.900	ENSCCAG00000033405	BRIX1	97	72.965	Cebus_capucinus
ENSSLDG00000007044	bxdc2	98	73.043	ENSCATG00000037721	BRIX1	97	73.761	Cercocebus_atys
ENSSLDG00000007044	bxdc2	86	78.305	ENSCLAG00000008124	BRIX1	86	76.974	Chinchilla_lanigera
ENSSLDG00000007044	bxdc2	98	74.344	ENSCSAG00000017117	BRIX1	97	74.344	Chlorocebus_sabaeus
ENSSLDG00000007044	bxdc2	96	59.644	ENSCHOG00000012227	-	89	61.465	Choloepus_hoffmanni
ENSSLDG00000007044	bxdc2	98	71.848	ENSCHOG00000001790	-	86	77.124	Choloepus_hoffmanni
ENSSLDG00000007044	bxdc2	94	75.078	ENSCPBG00000021309	BRIX1	96	74.481	Chrysemys_picta_bellii
ENSSLDG00000007044	bxdc2	71	58.848	ENSCING00000001695	-	97	57.143	Ciona_intestinalis
ENSSLDG00000007044	bxdc2	89	54.098	ENSCSAVG00000008644	-	90	56.318	Ciona_savignyi
ENSSLDG00000007044	bxdc2	98	74.344	ENSCANG00000022969	BRIX1	95	74.344	Colobus_angolensis_palliatus
ENSSLDG00000007044	bxdc2	98	73.469	ENSCGRG00001007932	Brix1	97	73.099	Cricetulus_griseus_chok1gshd
ENSSLDG00000007044	bxdc2	98	73.469	ENSCGRG00000016743	Brix1	97	73.099	Cricetulus_griseus_crigri
ENSSLDG00000007044	bxdc2	100	85.088	ENSCSEG00000019821	bxdc2	100	85.088	Cynoglossus_semilaevis
ENSSLDG00000007044	bxdc2	99	84.071	ENSCVAG00000016942	bxdc2	99	84.071	Cyprinodon_variegatus
ENSSLDG00000007044	bxdc2	85	77.397	ENSDARG00000098935	bxdc2	78	76.412	Danio_rerio
ENSSLDG00000007044	bxdc2	97	72.189	ENSDNOG00000002878	BRIX1	89	75.556	Dasypus_novemcinctus
ENSSLDG00000007044	bxdc2	98	72.886	ENSDORG00000009369	Brix1	97	72.093	Dipodomys_ordii
ENSSLDG00000007044	bxdc2	67	61.538	FBgn0035524	CG11583	66	61.538	Drosophila_melanogaster
ENSSLDG00000007044	bxdc2	99	67.246	ENSETEG00000017329	-	97	67.442	Echinops_telfairi
ENSSLDG00000007044	bxdc2	99	67.733	ENSETEG00000017842	-	99	67.733	Echinops_telfairi
ENSSLDG00000007044	bxdc2	74	71.654	ENSEBUG00000007717	BRIX1	87	66.197	Eptatretus_burgeri
ENSSLDG00000007044	bxdc2	98	73.469	ENSEASG00005014968	BRIX1	97	73.178	Equus_asinus_asinus
ENSSLDG00000007044	bxdc2	98	72.384	ENSECAG00000000377	BRIX1	89	73.178	Equus_caballus
ENSSLDG00000007044	bxdc2	98	63.873	ENSEEUG00000008350	BRIX1	85	69.205	Erinaceus_europaeus
ENSSLDG00000007044	bxdc2	99	79.646	ENSELUG00000009050	bxdc2	94	79.056	Esox_lucius
ENSSLDG00000007044	bxdc2	98	74.052	ENSFCAG00000042465	BRIX1	97	74.052	Felis_catus
ENSSLDG00000007044	bxdc2	96	74.118	ENSFALG00000002106	BRIX1	93	73.591	Ficedula_albicollis
ENSSLDG00000007044	bxdc2	98	73.043	ENSFDAG00000018960	BRIX1	97	72.674	Fukomys_damarensis
ENSSLDG00000007044	bxdc2	100	84.840	ENSFHEG00000004488	bxdc2	100	84.840	Fundulus_heteroclitus
ENSSLDG00000007044	bxdc2	83	84.266	ENSGMOG00000002425	bxdc2	99	84.266	Gadus_morhua
ENSSLDG00000007044	bxdc2	97	75.821	ENSGALG00000003373	BRIX1	85	81.481	Gallus_gallus
ENSSLDG00000007044	bxdc2	100	85.673	ENSGAFG00000011947	bxdc2	100	85.673	Gambusia_affinis
ENSSLDG00000007044	bxdc2	95	83.642	ENSGACG00000016491	bxdc2	99	82.196	Gasterosteus_aculeatus
ENSSLDG00000007044	bxdc2	94	75.078	ENSGAGG00000011959	BRIX1	97	74.481	Gopherus_agassizii
ENSSLDG00000007044	bxdc2	98	74.344	ENSGGOG00000004225	BRIX1	97	74.344	Gorilla_gorilla
ENSSLDG00000007044	bxdc2	100	85.965	ENSHBUG00000017923	bxdc2	100	85.965	Haplochromis_burtoni
ENSSLDG00000007044	bxdc2	98	56.560	ENSHGLG00000002055	-	96	56.560	Heterocephalus_glaber_female
ENSSLDG00000007044	bxdc2	96	59.036	ENSHGLG00000017782	-	93	58.084	Heterocephalus_glaber_female
ENSSLDG00000007044	bxdc2	98	73.178	ENSHGLG00000004566	BRIX1	97	73.178	Heterocephalus_glaber_female
ENSSLDG00000007044	bxdc2	96	56.667	ENSHGLG00000010349	-	97	56.364	Heterocephalus_glaber_female
ENSSLDG00000007044	bxdc2	96	59.459	ENSHGLG00000000296	-	88	61.513	Heterocephalus_glaber_female
ENSSLDG00000007044	bxdc2	98	73.178	ENSHGLG00100002204	-	97	72.886	Heterocephalus_glaber_male
ENSSLDG00000007044	bxdc2	90	59.283	ENSHGLG00100001527	-	85	59.283	Heterocephalus_glaber_male
ENSSLDG00000007044	bxdc2	98	68.343	ENSHGLG00100000068	-	88	70.382	Heterocephalus_glaber_male
ENSSLDG00000007044	bxdc2	95	60.790	ENSHGLG00100000909	-	71	62.418	Heterocephalus_glaber_male
ENSSLDG00000007044	bxdc2	100	79.942	ENSHCOG00000011674	bxdc2	100	79.942	Hippocampus_comes
ENSSLDG00000007044	bxdc2	96	77.711	ENSIPUG00000015099	brix1	95	76.807	Ictalurus_punctatus
ENSSLDG00000007044	bxdc2	98	72.012	ENSSTOG00000009600	BRIX1	86	76.797	Ictidomys_tridecemlineatus
ENSSLDG00000007044	bxdc2	98	66.181	ENSJJAG00000004662	-	86	69.256	Jaculus_jaculus
ENSSLDG00000007044	bxdc2	76	78.195	ENSJJAG00000001806	-	100	78.195	Jaculus_jaculus
ENSSLDG00000007044	bxdc2	98	66.860	ENSJJAG00000001423	-	97	66.570	Jaculus_jaculus
ENSSLDG00000007044	bxdc2	89	65.574	ENSJJAG00000009708	-	87	65.574	Jaculus_jaculus
ENSSLDG00000007044	bxdc2	100	85.174	ENSKMAG00000014487	bxdc2	100	86.047	Kryptolebias_marmoratus
ENSSLDG00000007044	bxdc2	100	81.105	ENSLBEG00000018123	bxdc2	100	82.507	Labrus_bergylta
ENSSLDG00000007044	bxdc2	99	73.824	ENSLACG00000005971	BRIX1	98	74.412	Latimeria_chalumnae
ENSSLDG00000007044	bxdc2	100	75.802	ENSLOCG00000011774	bxdc2	99	75.652	Lepisosteus_oculatus
ENSSLDG00000007044	bxdc2	98	73.021	ENSLAFG00000007249	BRIX1	86	77.815	Loxodonta_africana
ENSSLDG00000007044	bxdc2	98	73.043	ENSMFAG00000033107	BRIX1	97	73.761	Macaca_fascicularis
ENSSLDG00000007044	bxdc2	98	73.043	ENSMMUG00000038794	BRIX1	97	73.761	Macaca_mulatta
ENSSLDG00000007044	bxdc2	98	73.547	ENSMNEG00000039324	BRIX1	97	73.469	Macaca_nemestrina
ENSSLDG00000007044	bxdc2	98	73.043	ENSMLEG00000041564	BRIX1	97	73.761	Mandrillus_leucophaeus
ENSSLDG00000007044	bxdc2	100	88.081	ENSMAMG00000015004	bxdc2	100	88.081	Mastacembelus_armatus
ENSSLDG00000007044	bxdc2	100	86.257	ENSMZEG00005019808	bxdc2	100	86.257	Maylandia_zebra
ENSSLDG00000007044	bxdc2	55	77.368	ENSMGAG00000003156	BRIX1	95	76.923	Meleagris_gallopavo
ENSSLDG00000007044	bxdc2	84	80.208	ENSMAUG00000014172	Brix1	96	80.208	Mesocricetus_auratus
ENSSLDG00000007044	bxdc2	98	73.761	ENSMICG00000005672	BRIX1	97	73.607	Microcebus_murinus
ENSSLDG00000007044	bxdc2	98	73.178	ENSMOCG00000018798	Brix1	97	72.515	Microtus_ochrogaster
ENSSLDG00000007044	bxdc2	100	88.630	ENSMMOG00000000861	bxdc2	100	88.630	Mola_mola
ENSSLDG00000007044	bxdc2	95	74.018	ENSMODG00000020386	BRIX1	96	73.256	Monodelphis_domestica
ENSSLDG00000007044	bxdc2	100	81.287	ENSMALG00000020437	bxdc2	100	81.287	Monopterus_albus
ENSSLDG00000007044	bxdc2	98	73.178	MGP_CAROLIEiJ_G0019665	Brix1	97	72.807	Mus_caroli
ENSSLDG00000007044	bxdc2	98	73.178	ENSMUSG00000022247	Brix1	97	72.807	Mus_musculus
ENSSLDG00000007044	bxdc2	98	73.178	MGP_SPRETEiJ_G0020562	Brix1	97	72.807	Mus_spretus
ENSSLDG00000007044	bxdc2	98	72.543	ENSMPUG00000015137	BRIX1	97	73.469	Mustela_putorius_furo
ENSSLDG00000007044	bxdc2	76	78.947	ENSMLUG00000029255	BRIX1	100	79.167	Myotis_lucifugus
ENSSLDG00000007044	bxdc2	98	73.021	ENSNGAG00000021812	-	97	72.674	Nannospalax_galili
ENSSLDG00000007044	bxdc2	98	72.434	ENSNGAG00000002585	-	88	77.778	Nannospalax_galili
ENSSLDG00000007044	bxdc2	100	85.965	ENSNBRG00000008850	bxdc2	95	85.965	Neolamprologus_brichardi
ENSSLDG00000007044	bxdc2	98	68.805	ENSNLEG00000032149	BRIX1	96	69.971	Nomascus_leucogenys
ENSSLDG00000007044	bxdc2	68	76.695	ENSMEUG00000016482	BRIX1	96	58.721	Notamacropus_eugenii
ENSSLDG00000007044	bxdc2	58	83.500	ENSOPRG00000012886	BRIX1	99	83.500	Ochotona_princeps
ENSSLDG00000007044	bxdc2	95	61.398	ENSODEG00000010997	-	85	64.706	Octodon_degus
ENSSLDG00000007044	bxdc2	69	61.506	ENSODEG00000002389	-	75	61.506	Octodon_degus
ENSSLDG00000007044	bxdc2	84	76.871	ENSODEG00000019171	-	99	76.871	Octodon_degus
ENSSLDG00000007044	bxdc2	100	86.550	ENSONIG00000007725	bxdc2	98	86.510	Oreochromis_niloticus
ENSSLDG00000007044	bxdc2	81	83.094	ENSOANG00000014525	-	99	80.471	Ornithorhynchus_anatinus
ENSSLDG00000007044	bxdc2	98	72.965	ENSOCUG00000014478	BRIX1	97	72.965	Oryctolagus_cuniculus
ENSSLDG00000007044	bxdc2	100	83.382	ENSORLG00000005895	bxdc2	100	83.382	Oryzias_latipes
ENSSLDG00000007044	bxdc2	100	83.673	ENSORLG00020005201	bxdc2	100	83.673	Oryzias_latipes_hni
ENSSLDG00000007044	bxdc2	100	83.090	ENSORLG00015011685	bxdc2	100	83.090	Oryzias_latipes_hsok
ENSSLDG00000007044	bxdc2	100	84.840	ENSOMEG00000007680	bxdc2	100	84.840	Oryzias_melastigma
ENSSLDG00000007044	bxdc2	86	80.000	ENSOGAG00000014827	BRIX1	88	77.636	Otolemur_garnettii
ENSSLDG00000007044	bxdc2	98	72.989	ENSOARG00000011539	BRIX1	97	74.344	Ovis_aries
ENSSLDG00000007044	bxdc2	98	72.886	ENSPPAG00000038183	BRIX1	97	74.052	Pan_paniscus
ENSSLDG00000007044	bxdc2	98	73.761	ENSPPRG00000023961	BRIX1	97	73.761	Panthera_pardus
ENSSLDG00000007044	bxdc2	98	74.052	ENSPTIG00000006466	BRIX1	97	74.052	Panthera_tigris_altaica
ENSSLDG00000007044	bxdc2	98	72.886	ENSPTRG00000016784	BRIX1	97	74.052	Pan_troglodytes
ENSSLDG00000007044	bxdc2	100	72.365	ENSPANG00000016504	BRIX1	97	73.066	Papio_anubis
ENSSLDG00000007044	bxdc2	99	79.586	ENSPKIG00000005920	bxdc2	84	79.586	Paramormyrops_kingsleyae
ENSSLDG00000007044	bxdc2	77	78.707	ENSPSIG00000011219	BRIX1	96	78.707	Pelodiscus_sinensis
ENSSLDG00000007044	bxdc2	100	78.717	ENSPMGG00000022988	bxdc2	100	78.717	Periophthalmus_magnuspinnatus
ENSSLDG00000007044	bxdc2	98	72.727	ENSPEMG00000016920	Brix1	86	77.303	Peromyscus_maniculatus_bairdii
ENSSLDG00000007044	bxdc2	98	73.392	ENSPCIG00000022778	BRIX1	86	77.994	Phascolarctos_cinereus
ENSSLDG00000007044	bxdc2	100	86.006	ENSPFOG00000008577	bxdc2	82	86.006	Poecilia_formosa
ENSSLDG00000007044	bxdc2	100	86.006	ENSPLAG00000006772	bxdc2	91	86.006	Poecilia_latipinna
ENSSLDG00000007044	bxdc2	100	86.006	ENSPMEG00000020229	bxdc2	91	86.006	Poecilia_mexicana
ENSSLDG00000007044	bxdc2	100	86.297	ENSPREG00000017461	bxdc2	92	86.297	Poecilia_reticulata
ENSSLDG00000007044	bxdc2	98	69.096	ENSPPYG00000015390	BRIX1	97	70.262	Pongo_abelii
ENSSLDG00000007044	bxdc2	54	73.797	ENSPCAG00000005158	-	100	73.797	Procavia_capensis
ENSSLDG00000007044	bxdc2	86	59.727	ENSPCOG00000016748	-	92	57.643	Propithecus_coquereli
ENSSLDG00000007044	bxdc2	98	73.469	ENSPCOG00000018281	-	97	73.178	Propithecus_coquereli
ENSSLDG00000007044	bxdc2	84	75.694	ENSPVAG00000016925	BRIX1	96	75.694	Pteropus_vampyrus
ENSSLDG00000007044	bxdc2	100	86.257	ENSPNYG00000007707	bxdc2	100	86.257	Pundamilia_nyererei
ENSSLDG00000007044	bxdc2	94	78.086	ENSPNAG00000010431	bxdc2	95	77.711	Pygocentrus_nattereri
ENSSLDG00000007044	bxdc2	98	72.754	ENSRNOG00000018021	Brix1	97	72.886	Rattus_norvegicus
ENSSLDG00000007044	bxdc2	98	73.761	ENSRBIG00000042083	BRIX1	95	73.761	Rhinopithecus_bieti
ENSSLDG00000007044	bxdc2	98	74.052	ENSRROG00000031228	BRIX1	95	74.052	Rhinopithecus_roxellana
ENSSLDG00000007044	bxdc2	69	49.799	YOL077C	-	87	49.206	Saccharomyces_cerevisiae
ENSSLDG00000007044	bxdc2	98	74.194	ENSSBOG00000033290	-	97	74.636	Saimiri_boliviensis_boliviensis
ENSSLDG00000007044	bxdc2	98	72.434	ENSSBOG00000017845	-	97	72.886	Saimiri_boliviensis_boliviensis
ENSSLDG00000007044	bxdc2	95	74.320	ENSSHAG00000010794	BRIX1	98	72.493	Sarcophilus_harrisii
ENSSLDG00000007044	bxdc2	94	79.688	ENSSFOG00015022435	brix1	98	78.635	Scleropages_formosus
ENSSLDG00000007044	bxdc2	98	89.318	ENSSMAG00000005909	bxdc2	99	89.318	Scophthalmus_maximus
ENSSLDG00000007044	bxdc2	100	99.123	ENSSDUG00000016234	bxdc2	100	99.123	Seriola_dumerili
ENSSLDG00000007044	bxdc2	86	76.949	ENSSARG00000009879	BRIX1	97	66.476	Sorex_araneus
ENSSLDG00000007044	bxdc2	93	73.125	ENSSPUG00000000011	-	91	74.441	Sphenodon_punctatus
ENSSLDG00000007044	bxdc2	79	81.550	ENSSPUG00000019166	-	96	79.443	Sphenodon_punctatus
ENSSLDG00000007044	bxdc2	100	87.719	ENSSPAG00000006309	bxdc2	100	87.719	Stegastes_partitus
ENSSLDG00000007044	bxdc2	98	74.636	ENSSSCG00000016827	BRIX1	95	74.052	Sus_scrofa
ENSSLDG00000007044	bxdc2	96	74.775	ENSTGUG00000001961	BRIX1	97	73.746	Taeniopygia_guttata
ENSSLDG00000007044	bxdc2	100	85.423	ENSTRUG00000011403	bxdc2	100	85.423	Takifugu_rubripes
ENSSLDG00000007044	bxdc2	94	85.404	ENSTNIG00000007517	bxdc2	98	83.918	Tetraodon_nigroviridis
ENSSLDG00000007044	bxdc2	84	75.347	ENSTBEG00000011652	BRIX1	96	75.347	Tupaia_belangeri
ENSSLDG00000007044	bxdc2	98	72.384	ENSTTRG00000003262	BRIX1	97	69.054	Tursiops_truncatus
ENSSLDG00000007044	bxdc2	98	64.162	ENSUAMG00000022481	BRIX1	86	67.961	Ursus_americanus
ENSSLDG00000007044	bxdc2	98	73.121	ENSUMAG00000012900	BRIX1	97	74.344	Ursus_maritimus
ENSSLDG00000007044	bxdc2	64	75.893	ENSVPAG00000010128	BRIX1	63	75.225	Vicugna_pacos
ENSSLDG00000007044	bxdc2	98	66.764	ENSVVUG00000022099	BRIX1	96	66.472	Vulpes_vulpes
ENSSLDG00000007044	bxdc2	99	74.493	ENSXETG00000000703	brix1	99	74.052	Xenopus_tropicalis
ENSSLDG00000007044	bxdc2	100	86.589	ENSXCOG00000002461	bxdc2	100	86.589	Xiphophorus_couchianus
ENSSLDG00000007044	bxdc2	100	86.589	ENSXMAG00000004284	bxdc2	86	86.589	Xiphophorus_maculatus