EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSLDG00000007118 (Gene tree)
Gene ID
-
Gene Symbol
pabpn1
Alias
fb19c03|wu:fb17e03|wu:fb18c06|wu:fb19c03|zgc:85979|zgc:92452
Full Name
poly(A) binding protein nuclear 1
Gene Type
protein_coding
Species
Seriola_lalandi_dorsalis
Status
putative
Strand
Plus strand
Length
15074 bases
Position
chrPEQF01099586.1:5256030-5271103
Accession
111648218
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSLDP00000008978RRM_1PF00076.222.3e-1711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSLDT00000009277-5385XM_023398040ENSSLDP00000008978232 (aa)XP_023253808UPI00054C6F57
Gene Model
Click here to download ENSSLDG00000007118's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000007118's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSLDG00000007118pabpn16361.438ENSSLDG00000021845PABPN1L6558.011
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSLDG00000007118pabpn19972.532ENSG00000258643BCL2L2-PABPN17072.532Homo_sapiens
ENSSLDG00000007118pabpn18682.524ENSG00000100836PABPN19482.143Homo_sapiens
ENSSLDG00000007118pabpn110099.569ENSAPOG00000016425pabpn110099.569Acanthochromis_polyacanthus
ENSSLDG00000007118pabpn18184.211ENSAMEG00000007048BCL2L2-PABPN110084.211Ailuropoda_melanoleuca
ENSSLDG00000007118pabpn19497.285ENSACIG00000021744pabpn110098.864Amphilophus_citrinellus
ENSSLDG00000007118pabpn110099.569ENSAOCG00000015805pabpn110099.569Amphiprion_ocellaris
ENSSLDG00000007118pabpn110099.569ENSAPEG00000009623pabpn110099.569Amphiprion_percula
ENSSLDG00000007118pabpn1100100.000ENSATEG00000020531pabpn1100100.000Anabas_testudineus
ENSSLDG00000007118pabpn18185.789ENSACAG00000006185-8172.917Anolis_carolinensis
ENSSLDG00000007118pabpn18483.838ENSANAG00000024513-8476.033Aotus_nancymaae
ENSSLDG00000007118pabpn19496.847ENSACLG00000016374pabpn17796.847Astatotilapia_calliptera
ENSSLDG00000007118pabpn110097.425ENSAMXG00000000452pabpn110097.425Astyanax_mexicanus
ENSSLDG00000007118pabpn18483.838ENSBTAG00000006884PABPN18669.697Bos_taurus
ENSSLDG00000007118pabpn18476.531ENSBTAG00000050594-7475.481Bos_taurus
ENSSLDG00000007118pabpn18182.812ENSBTAG00000053753-7182.812Bos_taurus
ENSSLDG00000007118pabpn16258.904WBGene00003904pabp-27557.595Caenorhabditis_elegans
ENSSLDG00000007118pabpn19975.966ENSCJAG00000007960-8476.395Callithrix_jacchus
ENSSLDG00000007118pabpn17180.357ENSCJAG00000004407-8480.357Callithrix_jacchus
ENSSLDG00000007118pabpn18682.524ENSCAFG00000011482PABPN18671.212Canis_familiaris
ENSSLDG00000007118pabpn18682.524ENSCAFG00020007298-8670.833Canis_lupus_dingo
ENSSLDG00000007118pabpn18682.524ENSCAFG00020006651-8670.833Canis_lupus_dingo
ENSSLDG00000007118pabpn18682.524ENSCHIG00000012184PABPN18670.833Capra_hircus
ENSSLDG00000007118pabpn19972.532ENSTSYG00000033996BCL2L2-PABPN19482.143Carlito_syrichta
ENSSLDG00000007118pabpn15982.014ENSCAPG00000009461-9284.496Cavia_aperea
ENSSLDG00000007118pabpn18682.039ENSCPOG00000025574PABPN16881.818Cavia_porcellus
ENSSLDG00000007118pabpn19975.966ENSCCAG00000033954BCL2L2-PABPN18476.395Cebus_capucinus
ENSSLDG00000007118pabpn19975.966ENSCATG00000038536BCL2L2-PABPN18476.395Cercocebus_atys
ENSSLDG00000007118pabpn16582.119ENSCLAG00000012423PABPN15682.119Chinchilla_lanigera
ENSSLDG00000007118pabpn18681.068ENSCSAG00000016036PABPN18669.697Chlorocebus_sabaeus
ENSSLDG00000007118pabpn18972.857ENSCHOG00000004798BCL2L2-PABPN19270.909Choloepus_hoffmanni
ENSSLDG00000007118pabpn17184.524ENSCPBG00000026060-9484.524Chrysemys_picta_bellii
ENSSLDG00000007118pabpn19062.559ENSCING00000012468-8962.085Ciona_intestinalis
ENSSLDG00000007118pabpn17664.045ENSCSAVG00000002001-9361.677Ciona_savignyi
ENSSLDG00000007118pabpn18571.212ENSCANG00000030980-8764.286Colobus_angolensis_palliatus
ENSSLDG00000007118pabpn19972.532ENSCANG00000009750BCL2L2-PABPN19482.143Colobus_angolensis_palliatus
ENSSLDG00000007118pabpn18682.039ENSCGRG00001019696Pabpn19481.548Cricetulus_griseus_chok1gshd
ENSSLDG00000007118pabpn16391.156ENSCGRG00000011102Pabpn19191.156Cricetulus_griseus_crigri
ENSSLDG00000007118pabpn110097.845ENSCSEG00000008774pabpn110097.845Cynoglossus_semilaevis
ENSSLDG00000007118pabpn110094.017ENSCVAG00000003152pabpn110095.299Cyprinodon_variegatus
ENSSLDG00000007118pabpn110097.414ENSDARG00000045373pabpn110097.414Danio_rerio
ENSSLDG00000007118pabpn18153.476ENSDARG00000087996pabpn1l7267.521Danio_rerio
ENSSLDG00000007118pabpn18682.524ENSDNOG00000023682PABPN18670.833Dasypus_novemcinctus
ENSSLDG00000007118pabpn18681.553ENSDORG00000028966-8669.697Dipodomys_ordii
ENSSLDG00000007118pabpn15682.707ENSDORG00000023928-8581.967Dipodomys_ordii
ENSSLDG00000007118pabpn110057.983FBgn0005648Pabp29259.535Drosophila_melanogaster
ENSSLDG00000007118pabpn19972.845ENSEBUG00000002322pabpn19972.845Eptatretus_burgeri
ENSSLDG00000007118pabpn18682.524ENSEASG00005011716PABPN18670.833Equus_asinus_asinus
ENSSLDG00000007118pabpn18581.863ENSECAG00000011652PABPN18171.074Equus_caballus
ENSSLDG00000007118pabpn18680.097ENSEEUG00000012973-7176.077Erinaceus_europaeus
ENSSLDG00000007118pabpn110094.937ENSELUG00000022654pabpn110094.937Esox_lucius
ENSSLDG00000007118pabpn18682.524ENSFCAG00000031922PABPN18670.833Felis_catus
ENSSLDG00000007118pabpn17182.143ENSFDAG00000018381BCL2L2-PABPN19482.143Fukomys_damarensis
ENSSLDG00000007118pabpn110095.690ENSFHEG00000007215pabpn110095.690Fundulus_heteroclitus
ENSSLDG00000007118pabpn19596.833ENSGMOG00000003922pabpn17896.833Gadus_morhua
ENSSLDG00000007118pabpn18382.828ENSGALG00000052930-6182.938Gallus_gallus
ENSSLDG00000007118pabpn110097.863ENSGAFG00000017099pabpn110097.863Gambusia_affinis
ENSSLDG00000007118pabpn19598.182ENSGACG00000002167pabpn110092.713Gasterosteus_aculeatus
ENSSLDG00000007118pabpn19466.239ENSGGOG00000025919-9869.128Gorilla_gorilla
ENSSLDG00000007118pabpn18969.712ENSGGOG00000039675-9165.833Gorilla_gorilla
ENSSLDG00000007118pabpn19975.966ENSGGOG00000022683-8476.395Gorilla_gorilla
ENSSLDG00000007118pabpn110099.138ENSHBUG00000019523pabpn110099.138Haplochromis_burtoni
ENSSLDG00000007118pabpn18682.039ENSHGLG00000002927-9291.156Heterocephalus_glaber_female
ENSSLDG00000007118pabpn18770.048ENSHGLG00000018588-7074.468Heterocephalus_glaber_female
ENSSLDG00000007118pabpn17163.473ENSHGLG00000009842-9363.473Heterocephalus_glaber_female
ENSSLDG00000007118pabpn19471.493ENSHGLG00100006673-9291.156Heterocephalus_glaber_male
ENSSLDG00000007118pabpn18770.048ENSHGLG00100015565-8765.502Heterocephalus_glaber_male
ENSSLDG00000007118pabpn17170.060ENSHGLG00100018935-9472.674Heterocephalus_glaber_male
ENSSLDG00000007118pabpn110097.845ENSHCOG00000004655pabpn110097.845Hippocampus_comes
ENSSLDG00000007118pabpn110097.845ENSIPUG00000008085PABPN110097.845Ictalurus_punctatus
ENSSLDG00000007118pabpn110089.655ENSIPUG00000000180-9989.655Ictalurus_punctatus
ENSSLDG00000007118pabpn17182.143ENSSTOG00000029847BCL2L2-PABPN19482.143Ictidomys_tridecemlineatus
ENSSLDG00000007118pabpn17182.143ENSJJAG00000023507Gm205219482.143Jaculus_jaculus
ENSSLDG00000007118pabpn110097.425ENSKMAG00000018748pabpn110097.425Kryptolebias_marmoratus
ENSSLDG00000007118pabpn1100100.000ENSLBEG00000027266pabpn1100100.000Labrus_bergylta
ENSSLDG00000007118pabpn17588.764ENSLACG00000000646pabpn18185.946Latimeria_chalumnae
ENSSLDG00000007118pabpn19066.355ENSLOCG00000004694pabpn1l9966.355Lepisosteus_oculatus
ENSSLDG00000007118pabpn19594.545ENSLOCG00000000796pabpn17794.340Lepisosteus_oculatus
ENSSLDG00000007118pabpn16582.781ENSLAFG00000031227-9982.781Loxodonta_africana
ENSSLDG00000007118pabpn19972.532ENSMFAG00000032183BCL2L2-PABPN19482.143Macaca_fascicularis
ENSSLDG00000007118pabpn16174.648ENSMFAG00000031355-9974.648Macaca_fascicularis
ENSSLDG00000007118pabpn19972.532ENSMMUG00000014747BCL2L2-PABPN110082.313Macaca_mulatta
ENSSLDG00000007118pabpn18668.293ENSMMUG00000048382-8958.889Macaca_mulatta
ENSSLDG00000007118pabpn19975.966ENSMNEG00000045065BCL2L2-PABPN18476.395Macaca_nemestrina
ENSSLDG00000007118pabpn17968.984ENSMNEG00000035750-9974.648Macaca_nemestrina
ENSSLDG00000007118pabpn17266.467ENSMLEG00000034623-9972.535Mandrillus_leucophaeus
ENSSLDG00000007118pabpn19972.532ENSMLEG00000043862BCL2L2-PABPN19482.143Mandrillus_leucophaeus
ENSSLDG00000007118pabpn19998.690ENSMAMG00000007979pabpn17998.690Mastacembelus_armatus
ENSSLDG00000007118pabpn19599.091ENSMZEG00005011904pabpn17799.091Maylandia_zebra
ENSSLDG00000007118pabpn19972.532ENSMAUG00000007383Gm205218770.611Mesocricetus_auratus
ENSSLDG00000007118pabpn19976.395ENSMICG00000010002BCL2L2-PABPN18477.119Microcebus_murinus
ENSSLDG00000007118pabpn19972.103ENSMOCG00000018557Gm205219091.156Microtus_ochrogaster
ENSSLDG00000007118pabpn110099.569ENSMMOG00000005405pabpn110099.569Mola_mola
ENSSLDG00000007118pabpn18579.208ENSMODG00000004535-7970.661Monodelphis_domestica
ENSSLDG00000007118pabpn19999.127ENSMALG00000019612pabpn17899.127Monopterus_albus
ENSSLDG00000007118pabpn18681.068MGP_CAROLIEiJ_G0019277Pabpn19090.476Mus_caroli
ENSSLDG00000007118pabpn19971.674MGP_CAROLIEiJ_G0019276Gm205217071.674Mus_caroli
ENSSLDG00000007118pabpn19972.103ENSMUSG00000092232Gm205217072.103Mus_musculus
ENSSLDG00000007118pabpn18681.553ENSMUSG00000022194Pabpn19090.476Mus_musculus
ENSSLDG00000007118pabpn18681.553MGP_PahariEiJ_G0030295Pabpn110095.238Mus_pahari
ENSSLDG00000007118pabpn19972.103MGP_PahariEiJ_G0030294Gm205217072.103Mus_pahari
ENSSLDG00000007118pabpn18681.553MGP_SPRETEiJ_G0020166Pabpn19090.476Mus_spretus
ENSSLDG00000007118pabpn19972.103MGP_SPRETEiJ_G0020165Gm205217072.103Mus_spretus
ENSSLDG00000007118pabpn16682.051ENSMPUG00000006775-8784.247Mustela_putorius_furo
ENSSLDG00000007118pabpn18183.158ENSMLUG00000003800-10083.158Myotis_lucifugus
ENSSLDG00000007118pabpn18481.313ENSMLUG00000028677-8573.305Myotis_lucifugus
ENSSLDG00000007118pabpn18879.524ENSMLUG00000012452-8271.032Myotis_lucifugus
ENSSLDG00000007118pabpn19972.961ENSNGAG00000019529Gm205217072.961Nannospalax_galili
ENSSLDG00000007118pabpn19599.091ENSNBRG00000023955pabpn110098.864Neolamprologus_brichardi
ENSSLDG00000007118pabpn18669.268ENSNLEG00000030598-7767.308Nomascus_leucogenys
ENSSLDG00000007118pabpn16460.811ENSNLEG00000035292-9960.811Nomascus_leucogenys
ENSSLDG00000007118pabpn19972.532ENSNLEG00000015007-7482.297Nomascus_leucogenys
ENSSLDG00000007118pabpn18674.384ENSODEG00000003739-8862.646Octodon_degus
ENSSLDG00000007118pabpn17672.626ENSODEG00000011555-8971.429Octodon_degus
ENSSLDG00000007118pabpn19972.103ENSODEG00000002083BCL2L2-PABPN16881.818Octodon_degus
ENSSLDG00000007118pabpn19599.091ENSONIG00000008112pabpn17799.091Oreochromis_niloticus
ENSSLDG00000007118pabpn16384.354ENSOANG00000009218-10084.354Ornithorhynchus_anatinus
ENSSLDG00000007118pabpn18682.039ENSOCUG00000016174PABPN19570.611Oryctolagus_cuniculus
ENSSLDG00000007118pabpn19998.253ENSORLG00000027900pabpn19098.585Oryzias_latipes
ENSSLDG00000007118pabpn19998.253ENSORLG00020004681pabpn17898.253Oryzias_latipes_hni
ENSSLDG00000007118pabpn110098.707ENSORLG00015000018pabpn110098.707Oryzias_latipes_hsok
ENSSLDG00000007118pabpn19599.091ENSOMEG00000016618pabpn18299.087Oryzias_melastigma
ENSSLDG00000007118pabpn18682.524ENSOGAG00000008710PABPN18670.833Otolemur_garnettii
ENSSLDG00000007118pabpn19972.532ENSOARG00000019336BCL2L2-PABPN16472.532Ovis_aries
ENSSLDG00000007118pabpn19972.532ENSPPAG00000028984BCL2L2-PABPN18784.247Pan_paniscus
ENSSLDG00000007118pabpn17167.470ENSPPAG00000039421-9367.470Pan_paniscus
ENSSLDG00000007118pabpn18682.524ENSPPRG00000010567PABPN18670.833Panthera_pardus
ENSSLDG00000007118pabpn17182.143ENSPTIG00000001063BCL2L2-PABPN19482.143Panthera_tigris_altaica
ENSSLDG00000007118pabpn19975.966ENSPTRG00000006167BCL2L28476.395Pan_troglodytes
ENSSLDG00000007118pabpn110063.248ENSPTRG00000047273-9360.714Pan_troglodytes
ENSSLDG00000007118pabpn19975.966ENSPANG00000021100BCL2L2-PABPN18476.395Papio_anubis
ENSSLDG00000007118pabpn18469.697ENSPANG00000023326-9975.352Papio_anubis
ENSSLDG00000007118pabpn17169.512ENSPKIG00000008340pabpn1l8468.023Paramormyrops_kingsleyae
ENSSLDG00000007118pabpn110092.275ENSPKIG00000018052pabpn110095.708Paramormyrops_kingsleyae
ENSSLDG00000007118pabpn19995.197ENSPKIG00000008144-7895.197Paramormyrops_kingsleyae
ENSSLDG00000007118pabpn15876.866ENSPSIG00000011959-8484.348Pelodiscus_sinensis
ENSSLDG00000007118pabpn19598.636ENSPMGG00000022027pabpn18198.636Periophthalmus_magnuspinnatus
ENSSLDG00000007118pabpn19972.532ENSPEMG00000008332Gm205218991.156Peromyscus_maniculatus_bairdii
ENSSLDG00000007118pabpn17975.806ENSPMAG00000006212pabpn19965.041Petromyzon_marinus
ENSSLDG00000007118pabpn18680.000ENSPCIG00000027751-8670.455Phascolarctos_cinereus
ENSSLDG00000007118pabpn110097.436ENSPFOG00000010351pabpn19997.436Poecilia_formosa
ENSSLDG00000007118pabpn19996.970ENSPLAG00000022696pabpn17996.970Poecilia_latipinna
ENSSLDG00000007118pabpn110097.436ENSPMEG00000020856pabpn110097.436Poecilia_mexicana
ENSSLDG00000007118pabpn110097.863ENSPREG00000011278pabpn110097.863Poecilia_reticulata
ENSSLDG00000007118pabpn18182.474ENSPPYG00000005663PABPN18671.074Pongo_abelii
ENSSLDG00000007118pabpn17969.271ENSPCAG00000005902PABPN18259.836Procavia_capensis
ENSSLDG00000007118pabpn19976.395ENSPCOG00000028047BCL2L2-PABPN18477.119Propithecus_coquereli
ENSSLDG00000007118pabpn18880.861ENSPVAG00000005270PABPN18669.582Pteropus_vampyrus
ENSSLDG00000007118pabpn110099.138ENSPNYG00000013182pabpn110099.138Pundamilia_nyererei
ENSSLDG00000007118pabpn110098.276ENSPNAG00000023526pabpn110098.276Pygocentrus_nattereri
ENSSLDG00000007118pabpn18862.319ENSPNAG00000021666pabpn1l8469.591Pygocentrus_nattereri
ENSSLDG00000007118pabpn18682.039ENSRNOG00000042195Pabpn18570.611Rattus_norvegicus
ENSSLDG00000007118pabpn18971.698ENSRBIG00000039547-8266.518Rhinopithecus_bieti
ENSSLDG00000007118pabpn19471.946ENSRBIG00000040762BCL2L2-PABPN16572.986Rhinopithecus_bieti
ENSSLDG00000007118pabpn18871.292ENSRBIG00000042811-9567.401Rhinopithecus_bieti
ENSSLDG00000007118pabpn18867.773ENSRROG00000036409-7064.629Rhinopithecus_roxellana
ENSSLDG00000007118pabpn19471.946ENSRROG00000045535BCL2L2-PABPN19482.143Rhinopithecus_roxellana
ENSSLDG00000007118pabpn19466.964ENSRROG00000040409-8266.964Rhinopithecus_roxellana
ENSSLDG00000007118pabpn19968.699ENSSBOG00000026930BCL2L2-PABPN18784.247Saimiri_boliviensis_boliviensis
ENSSLDG00000007118pabpn19962.185ENSSHAG00000007707-9958.824Sarcophilus_harrisii
ENSSLDG00000007118pabpn18181.481ENSSHAG00000014841-8783.684Sarcophilus_harrisii
ENSSLDG00000007118pabpn110096.983ENSSFOG00015014718pabpn110096.983Scleropages_formosus
ENSSLDG00000007118pabpn16173.944ENSSFOG00015015833pabpn1l7768.862Scleropages_formosus
ENSSLDG00000007118pabpn110090.558ENSSFOG00015012565pabpn110090.558Scleropages_formosus
ENSSLDG00000007118pabpn110099.569ENSSMAG00000020157pabpn110099.569Scophthalmus_maximus
ENSSLDG00000007118pabpn19999.563ENSSDUG00000020582pabpn17899.563Seriola_dumerili
ENSSLDG00000007118pabpn17184.524ENSSPUG00000018308-9484.524Sphenodon_punctatus
ENSSLDG00000007118pabpn110098.283ENSSPAG00000021658pabpn110098.283Stegastes_partitus
ENSSLDG00000007118pabpn19262.963ENSSSCG00000034805-7959.048Sus_scrofa
ENSSLDG00000007118pabpn19972.532ENSSSCG00000002023PABPN18670.833Sus_scrofa
ENSSLDG00000007118pabpn110098.276ENSTRUG00000023664pabpn110098.276Takifugu_rubripes
ENSSLDG00000007118pabpn19293.488ENSTNIG00000005369pabpn19097.938Tetraodon_nigroviridis
ENSSLDG00000007118pabpn18682.524ENSUAMG00000024460PABPN16882.297Ursus_americanus
ENSSLDG00000007118pabpn19972.532ENSUMAG00000014288BCL2L2-PABPN17072.532Ursus_maritimus
ENSSLDG00000007118pabpn19972.532ENSVVUG00000019912BCL2L2-PABPN17682.990Vulpes_vulpes
ENSSLDG00000007118pabpn18486.224ENSXETG00000014597pabpn17382.870Xenopus_tropicalis
ENSSLDG00000007118pabpn17586.286ENSXCOG00000005158pabpn19886.286Xiphophorus_couchianus
ENSSLDG00000007118pabpn110098.291ENSXMAG00000006196pabpn110098.291Xiphophorus_maculatus

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