EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000007218 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: interferon-induced protein 44-like
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 8439 bases
Position: chrPEQF01096571.1:415880-424318
Accession: 111649935
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000009146	MMR_HSR1	PF01926.23	6.8e-05	1	1
ENSSLDP00000009102	MMR_HSR1	PF01926.23	8e-05	1	1
ENSSLDP00000009116	MMR_HSR1	PF01926.23	8.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000009425	-	1306	XM_023399634	ENSSLDP00000009116	347 (aa)	XP_023255402	-
ENSSLDT00000009409	-	1229	-	ENSSLDP00000009102	346 (aa)	-	-
ENSSLDT00000009456	-	1029	-	ENSSLDP00000009146	342 (aa)	-	-

Gene Model

Click here to download ENSSLDG00000007218's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000007218's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000007218	-	78	39.474	ENSSLDG00000022597	zgc:153654	56	39.474
ENSSLDG00000007218	-	74	32.422	ENSSLDG00000008952	-	88	32.422
ENSSLDG00000007218	-	73	37.302	ENSSLDG00000016397	-	93	37.302
ENSSLDG00000007218	-	75	43.580	ENSSLDG00000001629	-	56	44.048

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000007218	-	92	72.036	ENSACLG00000022198	-	89	72.036	Astatotilapia_calliptera
ENSSLDG00000007218	-	77	71.103	ENSELUG00000013202	-	80	71.103	Esox_lucius
ENSSLDG00000007218	-	92	71.429	ENSHBUG00000009125	-	91	71.429	Haplochromis_burtoni
ENSSLDG00000007218	-	92	72.036	ENSMZEG00005016318	-	90	72.036	Maylandia_zebra
ENSSLDG00000007218	-	79	78.519	ENSNBRG00000021847	-	96	78.519	Neolamprologus_brichardi
ENSSLDG00000007218	-	96	56.952	ENSPNYG00000016531	-	99	63.880	Pundamilia_nyererei
ENSSLDG00000007218	-	77	68.045	ENSPNAG00000009985	-	71	68.045	Pygocentrus_nattereri
ENSSLDG00000007218	-	76	50.382	ENSTRUG00000002247	-	94	50.382	Takifugu_rubripes
ENSSLDG00000007218	-	75	39.453	ENSTRUG00000003706	-	92	39.453	Takifugu_rubripes