EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000007474 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: heterogeneous nuclear ribonucleoprotein C-like
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 9256 bases
Position: chrPEQF01099215.1:2317208-2326463
Accession: 111668396
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000009387	RRM_1	PF00076.22	8e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000009713	-	2085	XM_023424444	ENSSLDP00000009387	287 (aa)	XP_023280212	-

Gene Model

Click here to download ENSSLDG00000007474's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000007474's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000007474	-	92	84.644	ENSSLDG00000007454	-	86	86.312
ENSSLDG00000007474	-	93	51.203	ENSSLDG00000020603	-	73	57.014
ENSSLDG00000007474	-	74	51.628	ENSSLDG00000017872	raly	70	52.582
ENSSLDG00000007474	-	92	50.173	ENSSLDG00000011534	-	75	54.425

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000007474	-	91	50.545	ENSG00000184672	RALYL	93	77.215	Homo_sapiens
ENSSLDG00000007474	-	87	86.111	ENSAPOG00000006963	hnrnpc	85	85.551	Acanthochromis_polyacanthus
ENSSLDG00000007474	-	88	84.496	ENSACIG00000000270	-	83	89.498	Amphilophus_citrinellus
ENSSLDG00000007474	-	88	87.891	ENSACIG00000016568	-	91	81.275	Amphilophus_citrinellus
ENSSLDG00000007474	-	87	85.714	ENSAOCG00000003896	-	85	85.171	Amphiprion_ocellaris
ENSSLDG00000007474	-	92	89.474	ENSAOCG00000021616	-	83	90.226	Amphiprion_ocellaris
ENSSLDG00000007474	-	87	85.714	ENSAPEG00000001489	-	85	85.171	Amphiprion_percula
ENSSLDG00000007474	-	92	89.474	ENSAPEG00000019962	-	85	89.850	Amphiprion_percula
ENSSLDG00000007474	-	98	94.737	ENSATEG00000018006	-	88	94.737	Anabas_testudineus
ENSSLDG00000007474	-	88	85.938	ENSATEG00000011734	-	85	85.938	Anabas_testudineus
ENSSLDG00000007474	-	91	47.902	ENSAPLG00000015574	RALYL	79	54.043	Anas_platyrhynchos
ENSSLDG00000007474	-	91	49.301	ENSACAG00000028464	RALYL	78	54.468	Anolis_carolinensis
ENSSLDG00000007474	-	91	50.730	ENSANAG00000023383	RALYL	78	57.080	Aotus_nancymaae
ENSSLDG00000007474	-	87	81.028	ENSACLG00000000995	-	83	85.714	Astatotilapia_calliptera
ENSSLDG00000007474	-	92	87.266	ENSACLG00000005707	-	90	88.015	Astatotilapia_calliptera
ENSSLDG00000007474	-	87	80.632	ENSACLG00000013636	-	87	81.818	Astatotilapia_calliptera
ENSSLDG00000007474	-	91	79.087	ENSAMXG00000034915	zgc:55733	91	76.806	Astyanax_mexicanus
ENSSLDG00000007474	-	72	79.904	ENSAMXG00000042946	hnrnpc	99	77.436	Astyanax_mexicanus
ENSSLDG00000007474	-	91	50.365	ENSCJAG00000000402	RALYL	78	56.195	Callithrix_jacchus
ENSSLDG00000007474	-	91	49.123	ENSCPOG00000012314	RALYL	78	54.701	Cavia_porcellus
ENSSLDG00000007474	-	91	50.730	ENSCCAG00000025003	RALYL	77	77.215	Cebus_capucinus
ENSSLDG00000007474	-	91	50.545	ENSCATG00000042145	RALYL	78	56.637	Cercocebus_atys
ENSSLDG00000007474	-	91	49.123	ENSCLAG00000005228	RALYL	78	54.701	Chinchilla_lanigera
ENSSLDG00000007474	-	73	53.982	ENSCHOG00000013228	RALYL	75	52.679	Choloepus_hoffmanni
ENSSLDG00000007474	-	91	50.545	ENSCANG00000039144	RALYL	78	56.637	Colobus_angolensis_palliatus
ENSSLDG00000007474	-	91	48.252	ENSCGRG00001009241	Ralyl	78	54.043	Cricetulus_griseus_chok1gshd
ENSSLDG00000007474	-	77	78.475	ENSCSEG00000019769	-	75	76.233	Cynoglossus_semilaevis
ENSSLDG00000007474	-	91	81.369	ENSCSEG00000021349	-	82	82.264	Cynoglossus_semilaevis
ENSSLDG00000007474	-	92	89.811	ENSCVAG00000016981	-	81	87.170	Cyprinodon_variegatus
ENSSLDG00000007474	-	94	67.273	ENSCVAG00000002797	-	86	66.409	Cyprinodon_variegatus
ENSSLDG00000007474	-	91	81.679	ENSDARG00000103845	zgc:55733	93	77.606	Danio_rerio
ENSSLDG00000007474	-	85	82.520	ENSDARG00000053810	hnrnpc	82	79.623	Danio_rerio
ENSSLDG00000007474	-	91	49.301	ENSDORG00000003721	Ralyl	78	54.894	Dipodomys_ordii
ENSSLDG00000007474	-	57	56.897	ENSETEG00000014028	RALYL	82	59.877	Echinops_telfairi
ENSSLDG00000007474	-	91	42.909	ENSEBUG00000012363	hnrnpc	67	48.246	Eptatretus_burgeri
ENSSLDG00000007474	-	72	50.233	ENSEBUG00000006049	RALYL	74	49.302	Eptatretus_burgeri
ENSSLDG00000007474	-	91	49.474	ENSEEUG00000007202	RALYL	79	54.310	Erinaceus_europaeus
ENSSLDG00000007474	-	92	84.074	ENSELUG00000004132	-	91	84.074	Esox_lucius
ENSSLDG00000007474	-	86	79.323	ENSELUG00000007714	-	93	75.362	Esox_lucius
ENSSLDG00000007474	-	91	47.535	ENSFALG00000008647	RALYL	97	57.407	Ficedula_albicollis
ENSSLDG00000007474	-	92	77.860	ENSFHEG00000003605	-	86	76.604	Fundulus_heteroclitus
ENSSLDG00000007474	-	88	84.815	ENSFHEG00000007278	-	82	82.222	Fundulus_heteroclitus
ENSSLDG00000007474	-	77	53.586	ENSGALG00000036938	RALYL	93	44.702	Gallus_gallus
ENSSLDG00000007474	-	91	85.171	ENSGAFG00000020992	-	85	85.171	Gambusia_affinis
ENSSLDG00000007474	-	92	76.015	ENSGAFG00000020486	-	86	77.358	Gambusia_affinis
ENSSLDG00000007474	-	77	72.398	ENSGACG00000018932	-	89	72.197	Gasterosteus_aculeatus
ENSSLDG00000007474	-	89	85.271	ENSGACG00000017772	-	97	84.921	Gasterosteus_aculeatus
ENSSLDG00000007474	-	91	50.545	ENSGGOG00000000841	RALYL	78	56.637	Gorilla_gorilla
ENSSLDG00000007474	-	92	87.266	ENSHBUG00000010527	-	84	88.015	Haplochromis_burtoni
ENSSLDG00000007474	-	87	81.423	ENSHBUG00000018342	-	85	82.576	Haplochromis_burtoni
ENSSLDG00000007474	-	91	48.772	ENSHGLG00000004866	RALYL	78	54.274	Heterocephalus_glaber_female
ENSSLDG00000007474	-	91	48.772	ENSHGLG00100017480	RALYL	78	54.274	Heterocephalus_glaber_male
ENSSLDG00000007474	-	90	82.051	ENSHCOG00000012333	hnrnpc	91	79.496	Hippocampus_comes
ENSSLDG00000007474	-	91	81.369	ENSIPUG00000008666	zgc:55733	95	80.093	Ictalurus_punctatus
ENSSLDG00000007474	-	89	80.233	ENSIPUG00000011271	hnrnpc	98	82.222	Ictalurus_punctatus
ENSSLDG00000007474	-	91	48.951	ENSSTOG00000012583	RALYL	80	54.468	Ictidomys_tridecemlineatus
ENSSLDG00000007474	-	94	80.147	ENSKMAG00000011170	-	84	82.692	Kryptolebias_marmoratus
ENSSLDG00000007474	-	92	85.714	ENSKMAG00000018265	-	83	86.466	Kryptolebias_marmoratus
ENSSLDG00000007474	-	91	89.354	ENSLBEG00000006193	-	84	88.679	Labrus_bergylta
ENSSLDG00000007474	-	95	76.157	ENSLBEG00000006979	-	86	80.478	Labrus_bergylta
ENSSLDG00000007474	-	96	73.702	ENSLBEG00000024418	-	87	72.453	Labrus_bergylta
ENSSLDG00000007474	-	91	71.805	ENSLOCG00000002560	hnrnpc	91	72.285	Lepisosteus_oculatus
ENSSLDG00000007474	-	91	50.545	ENSMNEG00000033288	RALYL	78	56.637	Macaca_nemestrina
ENSSLDG00000007474	-	91	50.545	ENSMLEG00000038284	RALYL	78	56.637	Mandrillus_leucophaeus
ENSSLDG00000007474	-	92	88.764	ENSMAMG00000008033	-	90	89.513	Mastacembelus_armatus
ENSSLDG00000007474	-	87	86.508	ENSMAMG00000012236	-	84	86.312	Mastacembelus_armatus
ENSSLDG00000007474	-	92	87.266	ENSMZEG00005024249	-	84	88.015	Maylandia_zebra
ENSSLDG00000007474	-	88	80.077	ENSMZEG00005020460	-	88	80.077	Maylandia_zebra
ENSSLDG00000007474	-	91	48.252	ENSMAUG00000015149	Ralyl	78	54.043	Mesocricetus_auratus
ENSSLDG00000007474	-	91	50.365	ENSMICG00000005558	RALYL	80	77.215	Microcebus_murinus
ENSSLDG00000007474	-	91	48.592	ENSMOCG00000017371	Ralyl	78	54.043	Microtus_ochrogaster
ENSSLDG00000007474	-	86	89.558	ENSMMOG00000019520	-	84	91.633	Mola_mola
ENSSLDG00000007474	-	91	81.749	ENSMMOG00000021465	-	92	83.270	Mola_mola
ENSSLDG00000007474	-	92	91.288	ENSMALG00000014623	-	84	91.288	Monopterus_albus
ENSSLDG00000007474	-	88	76.471	ENSMALG00000007520	-	85	77.953	Monopterus_albus
ENSSLDG00000007474	-	91	47.902	ENSMUSG00000039717	Ralyl	93	75.949	Mus_musculus
ENSSLDG00000007474	-	91	49.648	ENSMPUG00000010724	RALYL	78	53.617	Mustela_putorius_furo
ENSSLDG00000007474	-	91	48.252	ENSNGAG00000013375	Ralyl	78	54.043	Nannospalax_galili
ENSSLDG00000007474	-	89	81.783	ENSNBRG00000004912	-	94	81.416	Neolamprologus_brichardi
ENSSLDG00000007474	-	92	87.266	ENSNBRG00000015676	-	83	88.015	Neolamprologus_brichardi
ENSSLDG00000007474	-	91	50.545	ENSNLEG00000002702	RALYL	74	56.637	Nomascus_leucogenys
ENSSLDG00000007474	-	62	51.295	ENSOPRG00000013650	-	98	49.215	Ochotona_princeps
ENSSLDG00000007474	-	91	49.296	ENSODEG00000001012	RALYL	78	53.879	Octodon_degus
ENSSLDG00000007474	-	87	82.213	ENSONIG00000007859	-	93	80.515	Oreochromis_niloticus
ENSSLDG00000007474	-	92	86.891	ENSONIG00000018350	-	84	87.640	Oreochromis_niloticus
ENSSLDG00000007474	-	87	74.118	ENSORLG00000009999	-	85	73.585	Oryzias_latipes
ENSSLDG00000007474	-	92	84.926	ENSORLG00000003144	-	82	85.662	Oryzias_latipes
ENSSLDG00000007474	-	87	73.725	ENSORLG00020018228	hnrnpc	85	73.208	Oryzias_latipes_hni
ENSSLDG00000007474	-	87	74.118	ENSORLG00015019755	-	85	73.585	Oryzias_latipes_hsok
ENSSLDG00000007474	-	92	84.926	ENSORLG00015009460	-	82	85.662	Oryzias_latipes_hsok
ENSSLDG00000007474	-	92	89.057	ENSOMEG00000022665	-	83	89.811	Oryzias_melastigma
ENSSLDG00000007474	-	87	75.686	ENSOMEG00000020488	-	85	75.094	Oryzias_melastigma
ENSSLDG00000007474	-	91	50.545	ENSPPAG00000038705	RALYL	78	56.637	Pan_paniscus
ENSSLDG00000007474	-	91	52.000	ENSPPRG00000018612	RALYL	78	56.388	Panthera_pardus
ENSSLDG00000007474	-	91	52.000	ENSPTIG00000020331	RALYL	78	56.388	Panthera_tigris_altaica
ENSSLDG00000007474	-	91	50.545	ENSPTRG00000020381	RALYL	78	56.637	Pan_troglodytes
ENSSLDG00000007474	-	91	50.545	ENSPANG00000029305	RALYL	78	56.637	Papio_anubis
ENSSLDG00000007474	-	92	79.853	ENSPKIG00000008592	-	85	78.755	Paramormyrops_kingsleyae
ENSSLDG00000007474	-	90	78.358	ENSPKIG00000022837	-	84	78.358	Paramormyrops_kingsleyae
ENSSLDG00000007474	-	90	47.719	ENSPSIG00000011135	RALYL	78	54.043	Pelodiscus_sinensis
ENSSLDG00000007474	-	76	91.743	ENSPMGG00000013144	-	82	91.743	Periophthalmus_magnuspinnatus
ENSSLDG00000007474	-	77	76.923	ENSPMGG00000017774	-	96	67.672	Periophthalmus_magnuspinnatus
ENSSLDG00000007474	-	91	48.252	ENSPEMG00000016447	Ralyl	78	54.043	Peromyscus_maniculatus_bairdii
ENSSLDG00000007474	-	73	54.185	ENSPMAG00000002407	RALYL	97	52.402	Petromyzon_marinus
ENSSLDG00000007474	-	92	87.170	ENSPFOG00000002643	-	84	85.874	Poecilia_formosa
ENSSLDG00000007474	-	92	77.037	ENSPFOG00000001583	-	86	79.245	Poecilia_formosa
ENSSLDG00000007474	-	92	87.170	ENSPLAG00000000061	-	82	87.170	Poecilia_latipinna
ENSSLDG00000007474	-	92	75.836	ENSPLAG00000015305	-	86	78.030	Poecilia_latipinna
ENSSLDG00000007474	-	92	86.792	ENSPMEG00000016524	-	82	89.434	Poecilia_mexicana
ENSSLDG00000007474	-	92	78.229	ENSPMEG00000004802	-	86	79.245	Poecilia_mexicana
ENSSLDG00000007474	-	87	79.216	ENSPREG00000007928	-	86	77.736	Poecilia_reticulata
ENSSLDG00000007474	-	92	86.415	ENSPREG00000001852	-	89	86.415	Poecilia_reticulata
ENSSLDG00000007474	-	91	44.074	ENSPPYG00000018710	-	68	72.115	Pongo_abelii
ENSSLDG00000007474	-	90	48.763	ENSPVAG00000010821	RALYL	78	54.043	Pteropus_vampyrus
ENSSLDG00000007474	-	89	82.558	ENSPNYG00000020293	-	87	82.946	Pundamilia_nyererei
ENSSLDG00000007474	-	92	87.266	ENSPNYG00000003747	-	90	88.015	Pundamilia_nyererei
ENSSLDG00000007474	-	85	84.082	ENSPNAG00000015686	hnrnpc	89	81.818	Pygocentrus_nattereri
ENSSLDG00000007474	-	91	76.471	ENSPNAG00000019200	zgc:55733	86	74.074	Pygocentrus_nattereri
ENSSLDG00000007474	-	91	50.545	ENSRROG00000023925	RALYL	82	75.309	Rhinopithecus_roxellana
ENSSLDG00000007474	-	87	77.567	ENSSFOG00015012924	-	80	96.203	Scleropages_formosus
ENSSLDG00000007474	-	92	76.103	ENSSFOG00015012015	-	82	84.722	Scleropages_formosus
ENSSLDG00000007474	-	87	80.952	ENSSMAG00000013592	-	84	80.524	Scophthalmus_maximus
ENSSLDG00000007474	-	90	87.786	ENSSMAG00000011147	-	82	89.888	Scophthalmus_maximus
ENSSLDG00000007474	-	92	85.019	ENSSDUG00000001723	-	85	86.692	Seriola_dumerili
ENSSLDG00000007474	-	98	99.288	ENSSDUG00000006730	-	90	99.288	Seriola_dumerili
ENSSLDG00000007474	-	65	72.115	ENSSARG00000002374	RALYL	59	62.992	Sorex_araneus
ENSSLDG00000007474	-	98	94.406	ENSSPAG00000013996	-	90	94.406	Stegastes_partitus
ENSSLDG00000007474	-	92	84.701	ENSSPAG00000023204	-	85	86.312	Stegastes_partitus
ENSSLDG00000007474	-	91	48.239	ENSTGUG00000011689	RALYL	80	54.077	Taeniopygia_guttata
ENSSLDG00000007474	-	91	80.608	ENSTRUG00000020158	-	84	82.677	Takifugu_rubripes
ENSSLDG00000007474	-	88	79.615	ENSTNIG00000007427	-	84	80.000	Tetraodon_nigroviridis
ENSSLDG00000007474	-	87	84.921	ENSTNIG00000000334	-	94	79.923	Tetraodon_nigroviridis
ENSSLDG00000007474	-	77	47.660	ENSTBEG00000005551	RALYL	91	47.863	Tupaia_belangeri
ENSSLDG00000007474	-	91	48.214	ENSTTRG00000015762	RALYL	74	54.167	Tursiops_truncatus
ENSSLDG00000007474	-	91	46.715	ENSVPAG00000008501	RALYL	78	51.770	Vicugna_pacos
ENSSLDG00000007474	-	54	91.411	ENSXCOG00000019434	-	93	77.626	Xiphophorus_couchianus
ENSSLDG00000007474	-	93	71.691	ENSXCOG00000006552	-	82	72.157	Xiphophorus_couchianus
ENSSLDG00000007474	-	92	77.860	ENSXMAG00000009333	-	86	77.358	Xiphophorus_maculatus
ENSSLDG00000007474	-	92	86.415	ENSXMAG00000022849	-	86	86.415	Xiphophorus_maculatus