EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000007568 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 655 bases
Position: chrPEQF01098643.1:16023-16677
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000009513	zf-C2H2	PF00096.26	1e-16	1	3
ENSSLDP00000009513	zf-C2H2	PF00096.26	1e-16	2	3
ENSSLDP00000009513	zf-C2H2	PF00096.26	1e-16	3	3
ENSSLDP00000009513	zf-met	PF12874.7	2.7e-08	1	2
ENSSLDP00000009513	zf-met	PF12874.7	2.7e-08	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000009845	-	483	-	ENSSLDP00000009513	160 (aa)	-	-

Gene Model

Click here to download ENSSLDG00000007568's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000007568's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000007568	-	98	42.222	ENSSLDG00000006288	-	94	41.880
ENSSLDG00000007568	-	91	50.980	ENSSLDG00000021278	-	62	50.980
ENSSLDG00000007568	-	76	46.341	ENSSLDG00000014177	zbtb47b	65	46.341
ENSSLDG00000007568	-	71	42.241	ENSSLDG00000017614	-	87	42.241
ENSSLDG00000007568	-	90	54.023	ENSSLDG00000000352	-	80	54.023
ENSSLDG00000007568	-	72	46.957	ENSSLDG00000009821	-	77	46.957
ENSSLDG00000007568	-	69	41.096	ENSSLDG00000025359	-	52	41.096
ENSSLDG00000007568	-	71	46.591	ENSSLDG00000001787	zbtb24	83	46.591
ENSSLDG00000007568	-	71	42.857	ENSSLDG00000015049	-	92	42.857
ENSSLDG00000007568	-	88	50.000	ENSSLDG00000020675	-	93	50.000
ENSSLDG00000007568	-	92	51.351	ENSSLDG00000001860	-	85	52.000
ENSSLDG00000007568	-	85	50.633	ENSSLDG00000018493	-	82	50.633
ENSSLDG00000007568	-	73	49.383	ENSSLDG00000000202	-	66	49.383
ENSSLDG00000007568	-	86	51.327	ENSSLDG00000000203	-	89	53.425
ENSSLDG00000007568	-	91	43.000	ENSSLDG00000005670	-	85	43.000
ENSSLDG00000007568	-	83	39.048	ENSSLDG00000012852	snai2	58	39.048
ENSSLDG00000007568	-	77	45.872	ENSSLDG00000012036	-	94	45.872
ENSSLDG00000007568	-	91	45.133	ENSSLDG00000016317	-	90	45.133
ENSSLDG00000007568	-	95	49.123	ENSSLDG00000005999	-	54	49.123
ENSSLDG00000007568	-	91	39.286	ENSSLDG00000006217	-	93	39.286
ENSSLDG00000007568	-	88	58.824	ENSSLDG00000007524	-	74	51.754
ENSSLDG00000007568	-	94	43.750	ENSSLDG00000013353	prdm5	79	41.111
ENSSLDG00000007568	-	86	50.794	ENSSLDG00000020455	-	89	50.794
ENSSLDG00000007568	-	91	39.286	ENSSLDG00000005868	-	95	39.286
ENSSLDG00000007568	-	97	40.741	ENSSLDG00000012821	znf236	56	40.741
ENSSLDG00000007568	-	88	45.283	ENSSLDG00000004485	-	61	45.283
ENSSLDG00000007568	-	79	50.794	ENSSLDG00000020727	-	95	51.351
ENSSLDG00000007568	-	71	43.011	ENSSLDG00000009582	-	94	43.011
ENSSLDG00000007568	-	90	46.392	ENSSLDG00000012320	-	96	45.536
ENSSLDG00000007568	-	73	40.909	ENSSLDG00000009061	-	92	36.364
ENSSLDG00000007568	-	91	50.893	ENSSLDG00000012133	-	88	52.475
ENSSLDG00000007568	-	86	49.425	ENSSLDG00000017937	-	96	45.133
ENSSLDG00000007568	-	98	51.282	ENSSLDG00000018598	-	86	51.282
ENSSLDG00000007568	-	98	45.536	ENSSLDG00000007756	-	95	45.536
ENSSLDG00000007568	-	74	54.054	ENSSLDG00000001850	-	69	54.054
ENSSLDG00000007568	-	97	44.037	ENSSLDG00000002776	-	72	44.037
ENSSLDG00000007568	-	73	49.462	ENSSLDG00000018033	-	55	49.462
ENSSLDG00000007568	-	71	44.037	ENSSLDG00000000432	-	84	44.037
ENSSLDG00000007568	-	96	44.944	ENSSLDG00000018273	-	86	44.944
ENSSLDG00000007568	-	86	43.519	ENSSLDG00000006994	-	83	43.519
ENSSLDG00000007568	-	83	47.321	ENSSLDG00000008645	-	89	47.321
ENSSLDG00000007568	-	72	42.857	ENSSLDG00000023060	-	70	42.857
ENSSLDG00000007568	-	83	43.810	ENSSLDG00000014166	znf319b	60	43.810
ENSSLDG00000007568	-	79	39.423	ENSSLDG00000013170	zbtb17	87	47.561
ENSSLDG00000007568	-	69	46.552	ENSSLDG00000002515	-	50	46.552
ENSSLDG00000007568	-	86	41.584	ENSSLDG00000024295	ZNF319	91	41.584
ENSSLDG00000007568	-	96	46.429	ENSSLDG00000020432	-	94	46.429
ENSSLDG00000007568	-	85	31.915	ENSSLDG00000015796	-	52	31.915
ENSSLDG00000007568	-	83	45.283	ENSSLDG00000014465	-	56	45.283
ENSSLDG00000007568	-	52	50.909	ENSSLDG00000002284	-	95	50.909
ENSSLDG00000007568	-	96	43.860	ENSSLDG00000017718	zbtb48	64	43.860
ENSSLDG00000007568	-	96	61.111	ENSSLDG00000002756	-	92	61.111
ENSSLDG00000007568	-	90	44.578	ENSSLDG00000000457	-	68	44.578
ENSSLDG00000007568	-	90	47.170	ENSSLDG00000004756	-	88	47.170
ENSSLDG00000007568	-	83	46.154	ENSSLDG00000023661	-	73	46.154
ENSSLDG00000007568	-	91	47.423	ENSSLDG00000013760	-	94	47.423
ENSSLDG00000007568	-	93	41.860	ENSSLDG00000014436	-	71	41.860
ENSSLDG00000007568	-	74	47.778	ENSSLDG00000010390	-	82	47.778
ENSSLDG00000007568	-	87	48.352	ENSSLDG00000020655	-	63	48.352
ENSSLDG00000007568	-	93	45.614	ENSSLDG00000005850	-	96	51.648
ENSSLDG00000007568	-	83	40.559	ENSSLDG00000000859	-	83	40.559
ENSSLDG00000007568	-	91	43.750	ENSSLDG00000025676	-	60	43.750
ENSSLDG00000007568	-	93	42.991	ENSSLDG00000006724	-	87	41.379
ENSSLDG00000007568	-	76	48.889	ENSSLDG00000000376	-	78	48.889
ENSSLDG00000007568	-	94	44.444	ENSSLDG00000004005	-	73	49.682
ENSSLDG00000007568	-	84	41.584	ENSSLDG00000016301	-	89	41.584
ENSSLDG00000007568	-	78	43.966	ENSSLDG00000015116	-	67	43.284
ENSSLDG00000007568	-	90	39.175	ENSSLDG00000010190	-	79	39.175
ENSSLDG00000007568	-	74	45.872	ENSSLDG00000004098	-	92	45.872

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000007568	-	84	44.643	ENSAPOG00000021496	-	58	44.643	Acanthochromis_polyacanthus
ENSSLDG00000007568	-	98	38.158	ENSACIG00000016133	-	68	38.158	Amphilophus_citrinellus
ENSSLDG00000007568	-	85	50.000	ENSAPEG00000011635	-	67	50.000	Amphiprion_percula
ENSSLDG00000007568	-	74	37.778	ENSATEG00000022022	-	92	37.778	Anabas_testudineus
ENSSLDG00000007568	-	71	43.182	ENSATEG00000024551	-	72	43.182	Anabas_testudineus
ENSSLDG00000007568	-	89	50.909	ENSATEG00000011235	-	66	50.909	Anabas_testudineus
ENSSLDG00000007568	-	94	49.123	ENSATEG00000011202	-	61	49.123	Anabas_testudineus
ENSSLDG00000007568	-	90	37.815	ENSATEG00000015828	-	64	37.500	Anabas_testudineus
ENSSLDG00000007568	-	72	43.750	ENSCVAG00000004508	-	56	43.750	Cyprinodon_variegatus
ENSSLDG00000007568	-	78	46.296	ENSCVAG00000003630	-	61	46.296	Cyprinodon_variegatus
ENSSLDG00000007568	-	77	53.933	ENSHBUG00000002878	-	67	53.933	Haplochromis_burtoni
ENSSLDG00000007568	-	76	38.889	ENSHBUG00000000731	-	52	38.889	Haplochromis_burtoni
ENSSLDG00000007568	-	89	47.959	ENSHCOG00000008205	-	90	47.959	Hippocampus_comes
ENSSLDG00000007568	-	84	42.169	ENSIPUG00000009577	-	52	42.169	Ictalurus_punctatus
ENSSLDG00000007568	-	78	45.679	ENSIPUG00000024007	-	55	45.679	Ictalurus_punctatus
ENSSLDG00000007568	-	70	51.282	ENSKMAG00000000520	-	53	51.282	Kryptolebias_marmoratus
ENSSLDG00000007568	-	88	53.261	ENSLBEG00000011006	-	60	53.261	Labrus_bergylta
ENSSLDG00000007568	-	93	50.909	ENSMAMG00000022152	-	61	50.909	Mastacembelus_armatus
ENSSLDG00000007568	-	76	38.889	ENSMZEG00005004047	-	52	38.889	Maylandia_zebra
ENSSLDG00000007568	-	72	44.706	ENSMALG00000014761	-	61	44.706	Monopterus_albus
ENSSLDG00000007568	-	85	41.071	ENSNBRG00000004381	-	76	43.158	Neolamprologus_brichardi
ENSSLDG00000007568	-	88	53.933	ENSNBRG00000024051	-	57	53.933	Neolamprologus_brichardi
ENSSLDG00000007568	-	80	49.451	ENSORLG00000025719	-	57	49.451	Oryzias_latipes
ENSSLDG00000007568	-	74	43.243	ENSORLG00020009554	-	73	43.243	Oryzias_latipes_hni
ENSSLDG00000007568	-	84	41.975	ENSORLG00020005815	-	70	41.975	Oryzias_latipes_hni
ENSSLDG00000007568	-	80	49.451	ENSORLG00015012599	-	57	49.451	Oryzias_latipes_hsok
ENSSLDG00000007568	-	84	41.860	ENSOMEG00000015640	-	84	41.860	Oryzias_melastigma
ENSSLDG00000007568	-	78	50.588	ENSOMEG00000010906	-	61	50.617	Oryzias_melastigma
ENSSLDG00000007568	-	78	48.193	ENSPLAG00000009651	-	68	48.193	Poecilia_latipinna
ENSSLDG00000007568	-	86	45.361	ENSPMEG00000023113	-	80	45.361	Poecilia_mexicana
ENSSLDG00000007568	-	93	44.643	ENSPREG00000016270	-	74	48.649	Poecilia_reticulata
ENSSLDG00000007568	-	90	43.956	ENSPREG00000004006	-	58	43.956	Poecilia_reticulata
ENSSLDG00000007568	-	78	53.933	ENSPNYG00000023882	-	84	53.933	Pundamilia_nyererei
ENSSLDG00000007568	-	81	52.809	ENSPNYG00000019187	-	70	54.867	Pundamilia_nyererei
ENSSLDG00000007568	-	91	50.442	ENSPNAG00000010317	-	82	50.442	Pygocentrus_nattereri
ENSSLDG00000007568	-	88	56.667	ENSSPAG00000021950	-	66	56.667	Stegastes_partitus
ENSSLDG00000007568	-	72	51.327	ENSXETG00000002690	-	54	51.327	Xenopus_tropicalis
ENSSLDG00000007568	-	71	46.591	ENSXCOG00000018315	-	91	46.591	Xiphophorus_couchianus