EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSLDG00000007694 (Gene tree)
Gene ID: -
Gene Symbol: thumpd1
Alias: zgc:77221
Full Name: THUMP domain containing 1
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 3386 bases
Position: chrPEQF01098038.1:147496-150881
Accession: 111651287
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000009664	THUMP	PF02926.17	2.5e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000010004	-	2103	XM_023401255	ENSSLDP00000009664	321 (aa)	XP_023257023	UPI000C6FA121

Gene Model

Click here to download ENSSLDG00000007694's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000007694's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000007694	thumpd1	97	52.396	ENSG00000066654	THUMPD1	87	51.118	Homo_sapiens
ENSSLDG00000007694	thumpd1	100	87.539	ENSAPOG00000008440	thumpd1	100	87.539	Acanthochromis_polyacanthus
ENSSLDG00000007694	thumpd1	95	54.045	ENSAMEG00000006257	THUMPD1	85	52.751	Ailuropoda_melanoleuca
ENSSLDG00000007694	thumpd1	89	86.760	ENSACIG00000024395	thumpd1	97	83.125	Amphilophus_citrinellus
ENSSLDG00000007694	thumpd1	100	88.162	ENSAOCG00000003509	thumpd1	100	88.162	Amphiprion_ocellaris
ENSSLDG00000007694	thumpd1	100	88.474	ENSAPEG00000010515	thumpd1	100	88.474	Amphiprion_percula
ENSSLDG00000007694	thumpd1	100	88.162	ENSATEG00000004737	thumpd1	100	86.604	Anabas_testudineus
ENSSLDG00000007694	thumpd1	84	57.971	ENSAPLG00000015259	THUMPD1	96	57.971	Anas_platyrhynchos
ENSSLDG00000007694	thumpd1	55	59.783	ENSACAG00000022881	-	98	59.783	Anolis_carolinensis
ENSSLDG00000007694	thumpd1	94	54.859	ENSACAG00000009625	-	99	54.859	Anolis_carolinensis
ENSSLDG00000007694	thumpd1	97	52.716	ENSANAG00000026882	-	87	51.118	Aotus_nancymaae
ENSSLDG00000007694	thumpd1	97	43.949	ENSANAG00000027040	-	85	42.405	Aotus_nancymaae
ENSSLDG00000007694	thumpd1	99	44.444	ENSANAG00000027311	-	90	42.547	Aotus_nancymaae
ENSSLDG00000007694	thumpd1	95	85.948	ENSACLG00000004830	thumpd1	100	84.112	Astatotilapia_calliptera
ENSSLDG00000007694	thumpd1	98	57.188	ENSAMXG00000012356	thumpd1	89	60.339	Astyanax_mexicanus
ENSSLDG00000007694	thumpd1	97	53.822	ENSBTAG00000047673	THUMPD1	87	52.229	Bos_taurus
ENSSLDG00000007694	thumpd1	96	53.526	ENSCJAG00000009499	THUMPD1	87	51.757	Callithrix_jacchus
ENSSLDG00000007694	thumpd1	98	52.532	ENSCAFG00000017985	THUMPD1	87	50.949	Canis_familiaris
ENSSLDG00000007694	thumpd1	98	52.532	ENSCAFG00020021861	THUMPD1	87	50.949	Canis_lupus_dingo
ENSSLDG00000007694	thumpd1	97	53.438	ENSCHIG00000010134	THUMPD1	87	51.572	Capra_hircus
ENSSLDG00000007694	thumpd1	82	58.647	ENSTSYG00000011537	THUMPD1	75	57.143	Carlito_syrichta
ENSSLDG00000007694	thumpd1	95	55.556	ENSCPOG00000008919	-	85	53.822	Cavia_porcellus
ENSSLDG00000007694	thumpd1	95	55.556	ENSCPOG00000023684	-	85	53.822	Cavia_porcellus
ENSSLDG00000007694	thumpd1	95	51.466	ENSCCAG00000019379	-	74	49.837	Cebus_capucinus
ENSSLDG00000007694	thumpd1	95	53.074	ENSCCAG00000030205	THUMPD1	86	51.456	Cebus_capucinus
ENSSLDG00000007694	thumpd1	94	45.161	ENSCATG00000020844	-	84	44.839	Cercocebus_atys
ENSSLDG00000007694	thumpd1	97	53.035	ENSCATG00000040309	THUMPD1	87	51.438	Cercocebus_atys
ENSSLDG00000007694	thumpd1	97	55.000	ENSCLAG00000016508	THUMPD1	87	52.795	Chinchilla_lanigera
ENSSLDG00000007694	thumpd1	96	41.640	ENSCSAG00000009860	-	69	40.446	Chlorocebus_sabaeus
ENSSLDG00000007694	thumpd1	97	53.035	ENSCSAG00000007610	THUMPD1	87	51.438	Chlorocebus_sabaeus
ENSSLDG00000007694	thumpd1	98	52.484	ENSCHOG00000005587	THUMPD1	88	50.932	Choloepus_hoffmanni
ENSSLDG00000007694	thumpd1	96	55.305	ENSCPBG00000019055	THUMPD1	86	57.096	Chrysemys_picta_bellii
ENSSLDG00000007694	thumpd1	85	49.265	ENSCANG00000035822	-	87	48.897	Colobus_angolensis_palliatus
ENSSLDG00000007694	thumpd1	74	53.975	ENSCANG00000038770	THUMPD1	74	54.185	Colobus_angolensis_palliatus
ENSSLDG00000007694	thumpd1	95	54.487	ENSCGRG00001014829	Thumpd1	86	52.866	Cricetulus_griseus_chok1gshd
ENSSLDG00000007694	thumpd1	95	54.487	ENSCGRG00000000060	Thumpd1	86	52.866	Cricetulus_griseus_crigri
ENSSLDG00000007694	thumpd1	98	74.603	ENSCSEG00000002041	thumpd1	99	74.921	Cynoglossus_semilaevis
ENSSLDG00000007694	thumpd1	90	83.737	ENSCVAG00000014960	thumpd1	100	78.638	Cyprinodon_variegatus
ENSSLDG00000007694	thumpd1	98	56.113	ENSDARG00000100264	thumpd1	74	64.231	Danio_rerio
ENSSLDG00000007694	thumpd1	98	52.978	ENSDNOG00000043510	THUMPD1	88	50.473	Dasypus_novemcinctus
ENSSLDG00000007694	thumpd1	79	61.004	ENSDORG00000028216	Thumpd1	73	61.004	Dipodomys_ordii
ENSSLDG00000007694	thumpd1	88	33.660	FBgn0035532	CG15014	94	33.016	Drosophila_melanogaster
ENSSLDG00000007694	thumpd1	96	48.553	ENSETEG00000002763	THUMPD1	73	48.077	Echinops_telfairi
ENSSLDG00000007694	thumpd1	93	41.158	ENSEBUG00000011011	THUMPD1	81	41.479	Eptatretus_burgeri
ENSSLDG00000007694	thumpd1	51	52.147	ENSEASG00005017428	-	83	52.147	Equus_asinus_asinus
ENSSLDG00000007694	thumpd1	97	53.185	ENSECAG00000005354	THUMPD1	87	51.282	Equus_caballus
ENSSLDG00000007694	thumpd1	84	57.934	ENSEEUG00000011256	THUMPD1	77	50.625	Erinaceus_europaeus
ENSSLDG00000007694	thumpd1	83	76.779	ENSELUG00000013612	thumpd1	63	76.030	Esox_lucius
ENSSLDG00000007694	thumpd1	95	53.548	ENSFCAG00000039296	THUMPD1	86	52.258	Felis_catus
ENSSLDG00000007694	thumpd1	69	62.667	ENSFALG00000014029	THUMPD1	93	56.604	Ficedula_albicollis
ENSSLDG00000007694	thumpd1	90	81.379	ENSFHEG00000013319	thumpd1	100	73.121	Fundulus_heteroclitus
ENSSLDG00000007694	thumpd1	98	69.304	ENSGMOG00000003369	thumpd1	98	68.671	Gadus_morhua
ENSSLDG00000007694	thumpd1	100	78.086	ENSGAFG00000011000	thumpd1	100	77.469	Gambusia_affinis
ENSSLDG00000007694	thumpd1	100	77.508	ENSGACG00000019511	thumpd1	100	76.900	Gasterosteus_aculeatus
ENSSLDG00000007694	thumpd1	98	56.740	ENSGAGG00000008225	THUMPD1	93	56.426	Gopherus_agassizii
ENSSLDG00000007694	thumpd1	64	50.490	ENSGGOG00000043232	-	63	49.020	Gorilla_gorilla
ENSSLDG00000007694	thumpd1	97	52.564	ENSGGOG00000005231	-	70	51.282	Gorilla_gorilla
ENSSLDG00000007694	thumpd1	95	86.275	ENSHBUG00000017996	thumpd1	100	84.424	Haplochromis_burtoni
ENSSLDG00000007694	thumpd1	95	55.556	ENSHGLG00000011001	-	85	53.674	Heterocephalus_glaber_female
ENSSLDG00000007694	thumpd1	58	50.785	ENSHGLG00000000952	-	84	50.785	Heterocephalus_glaber_female
ENSSLDG00000007694	thumpd1	58	50.785	ENSHGLG00100010577	-	84	50.785	Heterocephalus_glaber_male
ENSSLDG00000007694	thumpd1	95	55.873	ENSHGLG00100016023	THUMPD1	85	53.994	Heterocephalus_glaber_male
ENSSLDG00000007694	thumpd1	74	72.269	ENSHCOG00000008618	thumpd1	56	71.008	Hippocampus_comes
ENSSLDG00000007694	thumpd1	73	63.948	ENSIPUG00000012500	thumpd1	62	60.456	Ictalurus_punctatus
ENSSLDG00000007694	thumpd1	95	54.984	ENSSTOG00000007011	THUMPD1	86	53.376	Ictidomys_tridecemlineatus
ENSSLDG00000007694	thumpd1	93	52.632	ENSJJAG00000004295	-	86	50.987	Jaculus_jaculus
ENSSLDG00000007694	thumpd1	88	63.380	ENSKMAG00000009545	thumpd1	74	59.936	Kryptolebias_marmoratus
ENSSLDG00000007694	thumpd1	99	81.818	ENSLBEG00000009349	thumpd1	99	81.818	Labrus_bergylta
ENSSLDG00000007694	thumpd1	81	60.490	ENSLACG00000005833	THUMPD1	78	60.490	Latimeria_chalumnae
ENSSLDG00000007694	thumpd1	82	69.202	ENSLOCG00000000854	thumpd1	87	67.153	Lepisosteus_oculatus
ENSSLDG00000007694	thumpd1	97	53.333	ENSLAFG00000025838	THUMPD1	87	51.746	Loxodonta_africana
ENSSLDG00000007694	thumpd1	97	53.035	ENSMFAG00000036996	THUMPD1	87	51.438	Macaca_fascicularis
ENSSLDG00000007694	thumpd1	85	46.739	ENSMFAG00000041474	-	87	46.377	Macaca_fascicularis
ENSSLDG00000007694	thumpd1	85	46.739	ENSMMUG00000038414	-	87	46.377	Macaca_mulatta
ENSSLDG00000007694	thumpd1	97	53.035	ENSMMUG00000004225	THUMPD1	87	51.438	Macaca_mulatta
ENSSLDG00000007694	thumpd1	85	46.739	ENSMNEG00000038856	-	87	46.377	Macaca_nemestrina
ENSSLDG00000007694	thumpd1	97	53.035	ENSMNEG00000020726	THUMPD1	87	51.438	Macaca_nemestrina
ENSSLDG00000007694	thumpd1	70	53.744	ENSMLEG00000030012	-	72	53.304	Mandrillus_leucophaeus
ENSSLDG00000007694	thumpd1	97	53.035	ENSMLEG00000036436	THUMPD1	87	51.438	Mandrillus_leucophaeus
ENSSLDG00000007694	thumpd1	96	84.142	ENSMAMG00000006858	thumpd1	96	81.308	Mastacembelus_armatus
ENSSLDG00000007694	thumpd1	95	86.275	ENSMZEG00005013693	thumpd1	100	84.424	Maylandia_zebra
ENSSLDG00000007694	thumpd1	66	57.746	ENSMGAG00000010340	THUMPD1	97	57.971	Meleagris_gallopavo
ENSSLDG00000007694	thumpd1	95	54.167	ENSMAUG00000013306	Thumpd1	86	52.258	Mesocricetus_auratus
ENSSLDG00000007694	thumpd1	96	54.516	ENSMICG00000038483	-	86	53.247	Microcebus_murinus
ENSSLDG00000007694	thumpd1	81	46.718	ENSMICG00000030865	-	74	44.788	Microcebus_murinus
ENSSLDG00000007694	thumpd1	87	56.643	ENSMOCG00000003447	Thumpd1	80	54.930	Microtus_ochrogaster
ENSSLDG00000007694	thumpd1	84	82.545	ENSMMOG00000011323	thumpd1	81	79.636	Mola_mola
ENSSLDG00000007694	thumpd1	99	53.709	ENSMODG00000006971	-	86	54.630	Monodelphis_domestica
ENSSLDG00000007694	thumpd1	99	53.709	ENSMODG00000024776	-	87	54.938	Monodelphis_domestica
ENSSLDG00000007694	thumpd1	89	87.805	ENSMALG00000019522	thumpd1	100	84.326	Monopterus_albus
ENSSLDG00000007694	thumpd1	89	55.137	MGP_CAROLIEiJ_G0030382	Thumpd1	83	54.795	Mus_caroli
ENSSLDG00000007694	thumpd1	89	56.803	ENSMUSG00000030942	Thumpd1	83	55.137	Mus_musculus
ENSSLDG00000007694	thumpd1	93	55.375	MGP_PahariEiJ_G0013593	Thumpd1	87	55.375	Mus_pahari
ENSSLDG00000007694	thumpd1	92	55.667	ENSMLUG00000010547	THUMPD1	86	52.443	Myotis_lucifugus
ENSSLDG00000007694	thumpd1	97	53.165	ENSNGAG00000018643	Thumpd1	87	51.582	Nannospalax_galili
ENSSLDG00000007694	thumpd1	96	85.390	ENSNBRG00000006987	thumpd1	91	83.438	Neolamprologus_brichardi
ENSSLDG00000007694	thumpd1	97	52.716	ENSNLEG00000012369	THUMPD1	87	51.438	Nomascus_leucogenys
ENSSLDG00000007694	thumpd1	97	41.987	ENSOPRG00000011342	THUMPD1	60	57.143	Ochotona_princeps
ENSSLDG00000007694	thumpd1	95	53.398	ENSODEG00000012360	THUMPD1	86	51.466	Octodon_degus
ENSSLDG00000007694	thumpd1	89	89.474	ENSONIG00000000146	thumpd1	100	89.474	Oreochromis_niloticus
ENSSLDG00000007694	thumpd1	95	55.556	ENSOANG00000014297	THUMPD1	83	54.934	Ornithorhynchus_anatinus
ENSSLDG00000007694	thumpd1	58	54.595	ENSOCUG00000025354	-	83	54.595	Oryctolagus_cuniculus
ENSSLDG00000007694	thumpd1	95	55.195	ENSOCUG00000009895	-	86	53.571	Oryctolagus_cuniculus
ENSSLDG00000007694	thumpd1	90	82.353	ENSORLG00000027557	thumpd1	96	77.888	Oryzias_latipes
ENSSLDG00000007694	thumpd1	90	82.007	ENSORLG00020010206	thumpd1	96	78.947	Oryzias_latipes_hni
ENSSLDG00000007694	thumpd1	90	81.315	ENSORLG00015009581	thumpd1	98	76.038	Oryzias_latipes_hsok
ENSSLDG00000007694	thumpd1	86	83.032	ENSOMEG00000019361	thumpd1	96	75.000	Oryzias_melastigma
ENSSLDG00000007694	thumpd1	79	59.922	ENSOGAG00000026723	THUMPD1	72	57.977	Otolemur_garnettii
ENSSLDG00000007694	thumpd1	97	53.145	ENSOARG00000013107	THUMPD1	87	51.572	Ovis_aries
ENSSLDG00000007694	thumpd1	86	46.931	ENSPPAG00000001653	-	84	45.848	Pan_paniscus
ENSSLDG00000007694	thumpd1	97	52.077	ENSPPAG00000033818	-	70	50.799	Pan_paniscus
ENSSLDG00000007694	thumpd1	98	53.459	ENSPPRG00000014118	-	88	51.887	Panthera_pardus
ENSSLDG00000007694	thumpd1	97	53.185	ENSPTIG00000013856	-	88	51.258	Panthera_tigris_altaica
ENSSLDG00000007694	thumpd1	97	52.077	ENSPTRG00000007848	THUMPD1	70	50.799	Pan_troglodytes
ENSSLDG00000007694	thumpd1	83	44.944	ENSPTRG00000046073	-	79	43.820	Pan_troglodytes
ENSSLDG00000007694	thumpd1	97	53.035	ENSPANG00000025507	THUMPD1	87	51.438	Papio_anubis
ENSSLDG00000007694	thumpd1	70	53.712	ENSPANG00000034881	-	72	53.275	Papio_anubis
ENSSLDG00000007694	thumpd1	81	69.112	ENSPKIG00000014491	thumpd1	79	68.726	Paramormyrops_kingsleyae
ENSSLDG00000007694	thumpd1	80	62.403	ENSPSIG00000012430	THUMPD1	88	62.016	Pelodiscus_sinensis
ENSSLDG00000007694	thumpd1	83	77.323	ENSPMGG00000014479	thumpd1	94	77.323	Periophthalmus_magnuspinnatus
ENSSLDG00000007694	thumpd1	63	40.291	ENSPEMG00000002608	-	82	41.176	Peromyscus_maniculatus_bairdii
ENSSLDG00000007694	thumpd1	64	50.481	ENSPMAG00000001389	thumpd1	81	53.801	Petromyzon_marinus
ENSSLDG00000007694	thumpd1	80	62.548	ENSPCIG00000029241	THUMPD1	51	62.548	Phascolarctos_cinereus
ENSSLDG00000007694	thumpd1	100	76.994	ENSPFOG00000012649	thumpd1	100	76.380	Poecilia_formosa
ENSSLDG00000007694	thumpd1	100	77.538	ENSPLAG00000000137	thumpd1	100	76.923	Poecilia_latipinna
ENSSLDG00000007694	thumpd1	100	77.231	ENSPMEG00000007750	thumpd1	100	76.615	Poecilia_mexicana
ENSSLDG00000007694	thumpd1	79	87.891	ENSPREG00000000144	thumpd1	86	87.109	Poecilia_reticulata
ENSSLDG00000007694	thumpd1	77	52.419	ENSPPYG00000007160	-	80	54.185	Pongo_abelii
ENSSLDG00000007694	thumpd1	74	53.750	ENSPCAG00000001534	THUMPD1	80	53.913	Procavia_capensis
ENSSLDG00000007694	thumpd1	95	54.870	ENSPCOG00000024663	THUMPD1	86	53.247	Propithecus_coquereli
ENSSLDG00000007694	thumpd1	58	52.381	ENSPVAG00000003286	-	83	52.381	Pteropus_vampyrus
ENSSLDG00000007694	thumpd1	97	52.229	ENSPVAG00000005659	-	87	50.318	Pteropus_vampyrus
ENSSLDG00000007694	thumpd1	95	86.275	ENSPNYG00000007061	thumpd1	98	84.375	Pundamilia_nyererei
ENSSLDG00000007694	thumpd1	81	67.954	ENSPNAG00000024872	thumpd1	85	67.954	Pygocentrus_nattereri
ENSSLDG00000007694	thumpd1	59	55.729	ENSRNOG00000014946	AABR07005588.1	84	55.729	Rattus_norvegicus
ENSSLDG00000007694	thumpd1	88	49.310	ENSRBIG00000040136	-	94	48.966	Rhinopithecus_bieti
ENSSLDG00000007694	thumpd1	97	53.035	ENSRBIG00000040752	THUMPD1	87	51.438	Rhinopithecus_bieti
ENSSLDG00000007694	thumpd1	97	53.035	ENSRROG00000042189	THUMPD1	87	51.438	Rhinopithecus_roxellana
ENSSLDG00000007694	thumpd1	88	48.592	ENSRROG00000045699	-	94	48.239	Rhinopithecus_roxellana
ENSSLDG00000007694	thumpd1	79	30.909	YGL232W	-	94	30.545	Saccharomyces_cerevisiae
ENSSLDG00000007694	thumpd1	95	54.341	ENSSBOG00000034246	THUMPD1	86	52.104	Saimiri_boliviensis_boliviensis
ENSSLDG00000007694	thumpd1	79	62.109	ENSSHAG00000003853	THUMPD1	71	62.109	Sarcophilus_harrisii
ENSSLDG00000007694	thumpd1	92	55.593	ENSSFOG00015007512	thumpd1	98	53.086	Scleropages_formosus
ENSSLDG00000007694	thumpd1	100	86.018	ENSSMAG00000000723	thumpd1	100	85.106	Scophthalmus_maximus
ENSSLDG00000007694	thumpd1	100	99.377	ENSSDUG00000014502	thumpd1	100	99.377	Seriola_dumerili
ENSSLDG00000007694	thumpd1	92	56.146	ENSSPUG00000005096	THUMPD1	91	59.394	Sphenodon_punctatus
ENSSLDG00000007694	thumpd1	100	88.785	ENSSPAG00000006993	thumpd1	100	88.785	Stegastes_partitus
ENSSLDG00000007694	thumpd1	97	53.185	ENSSSCG00000024748	THUMPD1	87	53.185	Sus_scrofa
ENSSLDG00000007694	thumpd1	85	59.140	ENSTGUG00000009247	THUMPD1	99	59.140	Taeniopygia_guttata
ENSSLDG00000007694	thumpd1	100	79.751	ENSTRUG00000015656	thumpd1	100	79.751	Takifugu_rubripes
ENSSLDG00000007694	thumpd1	92	80.743	ENSTNIG00000001584	thumpd1	97	80.743	Tetraodon_nigroviridis
ENSSLDG00000007694	thumpd1	98	52.866	ENSTBEG00000005252	THUMPD1	78	51.911	Tupaia_belangeri
ENSSLDG00000007694	thumpd1	97	55.414	ENSTTRG00000016435	THUMPD1	87	53.503	Tursiops_truncatus
ENSSLDG00000007694	thumpd1	58	48.404	ENSUAMG00000005779	-	82	48.404	Ursus_americanus
ENSSLDG00000007694	thumpd1	94	55.375	ENSVPAG00000003422	THUMPD1	87	52.787	Vicugna_pacos
ENSSLDG00000007694	thumpd1	98	52.997	ENSVVUG00000023241	THUMPD1	88	51.420	Vulpes_vulpes
ENSSLDG00000007694	thumpd1	53	66.667	ENSXETG00000005539	thumpd1	59	66.667	Xenopus_tropicalis
ENSSLDG00000007694	thumpd1	51	70.520	ENSXCOG00000016003	thumpd1	90	71.930	Xiphophorus_couchianus
ENSSLDG00000007694	thumpd1	90	83.045	ENSXMAG00000026052	thumpd1	100	76.543	Xiphophorus_maculatus