EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSSLDG00000008014 (Gene tree)
Gene ID
-
Gene Symbol
-
Alias
-
Full Name
sm-like protein LSM5
Gene Type
protein_coding
Species
Seriola_lalandi_dorsalis
Status
putative
Strand
Minus strand
Length
255 bases
Position
chrPEQF01017787.1:142-396
Accession
111651508
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSLDP00000010052LSMPF01423.228.5e-2211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSLDT00000010417-255XM_023401461ENSSLDP0000001005284 (aa)XP_023257229UPI000C6F76AB
Gene Model
Click here to download ENSSLDG00000008014's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000008014's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSSLDG00000008014-9376.923ENSSLDG00000025242lsm58676.923
ENSSLDG00000008014-7035.593ENSSLDG00000004364-7735.593
ENSSLDG00000008014-8532.000ENSSLDG00000015364snrpe7932.000
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSLDG00000008014-9378.205ENSG00000106355LSM59477.586Homo_sapiens
ENSSLDG00000008014-8776.712ENSAPOG00000011743LSM59475.862Acanthochromis_polyacanthus
ENSSLDG00000008014-9376.923ENSAPOG00000020779LSM58977.632Acanthochromis_polyacanthus
ENSSLDG00000008014-9378.205ENSAMEG00000006700LSM58678.205Ailuropoda_melanoleuca
ENSSLDG00000008014-9376.923ENSAOCG00000001636lsm58676.923Amphiprion_ocellaris
ENSSLDG00000008014-9376.923ENSAPEG00000008151lsm58676.923Amphiprion_percula
ENSSLDG00000008014-6975.862ENSAPEG00000008201lsm59475.862Amphiprion_percula
ENSSLDG00000008014-8776.712ENSATEG00000020470lsm56973.171Anabas_testudineus
ENSSLDG00000008014-8679.167ENSAPLG00000008171LSM59779.167Anas_platyrhynchos
ENSSLDG00000008014-5678.723ENSACAG00000009530LSM57878.723Anolis_carolinensis
ENSSLDG00000008014-9275.325ENSANAG00000024192-8075.325Aotus_nancymaae
ENSSLDG00000008014-7074.576ENSANAG00000037758-7374.576Aotus_nancymaae
ENSSLDG00000008014-9378.205ENSANAG00000034409-8678.205Aotus_nancymaae
ENSSLDG00000008014-9376.923ENSACLG00000012891lsm58976.923Astatotilapia_calliptera
ENSSLDG00000008014-9265.000ENSAMXG00000035543lsm58667.901Astyanax_mexicanus
ENSSLDG00000008014-9378.205ENSBTAG00000002332LSM58678.205Bos_taurus
ENSSLDG00000008014-9272.727WBGene00003079lsm-58572.727Caenorhabditis_elegans
ENSSLDG00000008014-9279.221ENSCJAG00000047379LSM56671.429Callithrix_jacchus
ENSSLDG00000008014-9467.089ENSCJAG00000005678-8967.089Callithrix_jacchus
ENSSLDG00000008014-9378.205ENSCAFG00000019261-8678.205Canis_familiaris
ENSSLDG00000008014-9378.205ENSCAFG00020004946LSM58678.205Canis_lupus_dingo
ENSSLDG00000008014-7761.538ENSCHIG00000021428-8163.380Capra_hircus
ENSSLDG00000008014-9376.923ENSCHIG00000004079-8676.923Capra_hircus
ENSSLDG00000008014-9378.205ENSCHIG00000024539LSM58678.205Capra_hircus
ENSSLDG00000008014-9369.231ENSTSYG00000028728-8569.231Carlito_syrichta
ENSSLDG00000008014-9255.844ENSTSYG00000036637-8155.844Carlito_syrichta
ENSSLDG00000008014-9378.205ENSTSYG00000006449-8678.205Carlito_syrichta
ENSSLDG00000008014-8863.514ENSTSYG00000026530-7863.514Carlito_syrichta
ENSSLDG00000008014-7778.462ENSCAPG00000006980LSM58778.462Cavia_aperea
ENSSLDG00000008014-9378.205ENSCPOG00000036386LSM58678.205Cavia_porcellus
ENSSLDG00000008014-7372.131ENSCCAG00000032792-7672.131Cebus_capucinus
ENSSLDG00000008014-7565.079ENSCCAG00000037334-8265.079Cebus_capucinus
ENSSLDG00000008014-9376.923ENSCCAG00000000821-8676.923Cebus_capucinus
ENSSLDG00000008014-9378.205ENSCCAG00000037808-8678.205Cebus_capucinus
ENSSLDG00000008014-9375.641ENSCCAG00000032123-8675.641Cebus_capucinus
ENSSLDG00000008014-9271.429ENSCATG00000014790-8178.723Cercocebus_atys
ENSSLDG00000008014-9378.205ENSCATG00000040218LSM59477.586Cercocebus_atys
ENSSLDG00000008014-9365.385ENSCLAG00000005062-7765.385Chinchilla_lanigera
ENSSLDG00000008014-9378.205ENSCLAG00000000202LSM58678.205Chinchilla_lanigera
ENSSLDG00000008014-7980.303ENSCHOG00000005335LSM58780.303Choloepus_hoffmanni
ENSSLDG00000008014-9378.205ENSCPBG00000013685LSM58678.205Chrysemys_picta_bellii
ENSSLDG00000008014-9272.727ENSCING00000020625-8772.727Ciona_intestinalis
ENSSLDG00000008014-9272.727ENSCSAVG00000001439-8872.727Ciona_savignyi
ENSSLDG00000008014-9378.205ENSCANG00000039909LSM59477.586Colobus_angolensis_palliatus
ENSSLDG00000008014-9378.205ENSCGRG00001015461Lsm58678.205Cricetulus_griseus_chok1gshd
ENSSLDG00000008014-8578.873ENSCGRG00000007677Lsm59578.873Cricetulus_griseus_crigri
ENSSLDG00000008014-9376.923ENSCVAG00000004262lsm58676.923Cyprinodon_variegatus
ENSSLDG00000008014-9376.923ENSDARG00000071573lsm59475.862Danio_rerio
ENSSLDG00000008014-9267.532ENSDNOG00000049495-8467.532Dasypus_novemcinctus
ENSSLDG00000008014-9378.205ENSDNOG00000034958LSM58678.205Dasypus_novemcinctus
ENSSLDG00000008014-9378.205ENSDORG00000009422Lsm58678.205Dipodomys_ordii
ENSSLDG00000008014-9374.359FBgn0035675CG66108674.359Drosophila_melanogaster
ENSSLDG00000008014-8364.286ENSETEG00000016074-9264.286Echinops_telfairi
ENSSLDG00000008014-8960.000ENSETEG00000001469-8060.000Echinops_telfairi
ENSSLDG00000008014-9362.821ENSETEG00000010651-8562.821Echinops_telfairi
ENSSLDG00000008014-9378.205ENSETEG00000018068LSM58678.205Echinops_telfairi
ENSSLDG00000008014-8357.143ENSETEG00000000777-8257.895Echinops_telfairi
ENSSLDG00000008014-9275.325ENSEBUG00000008540lsm58575.325Eptatretus_burgeri
ENSSLDG00000008014-9378.205ENSEASG00005003500LSM58678.205Equus_asinus_asinus
ENSSLDG00000008014-9264.935ENSECAG00000018445LSM58364.935Equus_caballus
ENSSLDG00000008014-6474.074ENSEEUG00000004102LSM59074.074Erinaceus_europaeus
ENSSLDG00000008014-9376.923ENSELUG00000007792lsm58676.923Esox_lucius
ENSSLDG00000008014-9378.205ENSFCAG00000000230LSM58678.205Felis_catus
ENSSLDG00000008014-8679.167ENSFALG00000001892LSM58779.167Ficedula_albicollis
ENSSLDG00000008014-9651.852ENSFDAG00000008685-9751.852Fukomys_damarensis
ENSSLDG00000008014-9378.205ENSFDAG00000008767LSM58678.205Fukomys_damarensis
ENSSLDG00000008014-8569.014ENSFHEG00000004011lsm57669.014Fundulus_heteroclitus
ENSSLDG00000008014-9376.923ENSGMOG00000018235lsm58776.923Gadus_morhua
ENSSLDG00000008014-9279.221ENSGALG00000041625LSM58579.221Gallus_gallus
ENSSLDG00000008014-6975.862ENSGAFG00000016824lsm59475.862Gambusia_affinis
ENSSLDG00000008014-9376.923ENSGACG00000005528lsm58676.923Gasterosteus_aculeatus
ENSSLDG00000008014-9378.205ENSGAGG00000015593LSM58678.205Gopherus_agassizii
ENSSLDG00000008014-9378.205ENSGGOG00000043469LSM58678.205Gorilla_gorilla
ENSSLDG00000008014-9376.923ENSHBUG00000013773lsm58976.923Haplochromis_burtoni
ENSSLDG00000008014-9378.205ENSHGLG00000011765LSM58678.205Heterocephalus_glaber_female
ENSSLDG00000008014-8578.873ENSHGLG00100015610LSM58078.873Heterocephalus_glaber_male
ENSSLDG00000008014-9376.923ENSIPUG00000021095LSM58676.923Ictalurus_punctatus
ENSSLDG00000008014-8868.919ENSSTOG00000033886-8368.919Ictidomys_tridecemlineatus
ENSSLDG00000008014-9378.205ENSSTOG00000012662LSM58678.205Ictidomys_tridecemlineatus
ENSSLDG00000008014-8278.261ENSJJAG00000004475-8778.261Jaculus_jaculus
ENSSLDG00000008014-6574.545ENSJJAG00000016144-6674.545Jaculus_jaculus
ENSSLDG00000008014-9378.205ENSJJAG00000012145-8678.205Jaculus_jaculus
ENSSLDG00000008014-9375.641ENSKMAG00000021861lsm58675.641Kryptolebias_marmoratus
ENSSLDG00000008014-5665.957ENSLBEG00000017379lsm57765.957Labrus_bergylta
ENSSLDG00000008014-9575.000ENSLBEG00000009235LSM56275.000Labrus_bergylta
ENSSLDG00000008014-9376.923ENSLACG00000022448LSM58676.923Latimeria_chalumnae
ENSSLDG00000008014-9376.923ENSLOCG00000012903lsm58676.923Lepisosteus_oculatus
ENSSLDG00000008014-9378.205ENSLAFG00000029579LSM58678.205Loxodonta_africana
ENSSLDG00000008014-8960.000ENSLAFG00000027938-8060.000Loxodonta_africana
ENSSLDG00000008014-9376.923ENSMFAG00000030152-8676.923Macaca_fascicularis
ENSSLDG00000008014-9378.205ENSMFAG00000038508LSM58678.205Macaca_fascicularis
ENSSLDG00000008014-9376.923ENSMMUG00000030131-8676.923Macaca_mulatta
ENSSLDG00000008014-9271.429ENSMMUG00000039822-8471.429Macaca_mulatta
ENSSLDG00000008014-5071.429ENSMMUG00000045129-6671.429Macaca_mulatta
ENSSLDG00000008014-9378.205ENSMNEG00000015331LSM59477.586Macaca_nemestrina
ENSSLDG00000008014-9376.923ENSMNEG00000037935-8676.923Macaca_nemestrina
ENSSLDG00000008014-9378.205ENSMLEG00000024945LSM58678.205Mandrillus_leucophaeus
ENSSLDG00000008014-9369.231ENSMLEG00000034037-8669.231Mandrillus_leucophaeus
ENSSLDG00000008014-9378.205ENSMAMG00000012869lsm58678.205Mastacembelus_armatus
ENSSLDG00000008014-9376.923ENSMZEG00005019554lsm58976.923Maylandia_zebra
ENSSLDG00000008014-9279.221ENSMGAG00000012117LSM58579.221Meleagris_gallopavo
ENSSLDG00000008014-9277.922ENSMAUG00000008132-8577.922Mesocricetus_auratus
ENSSLDG00000008014-9378.205ENSMAUG00000012222Lsm58678.205Mesocricetus_auratus
ENSSLDG00000008014-6578.182ENSMICG00000033928-7178.182Microcebus_murinus
ENSSLDG00000008014-9378.205ENSMICG00000005353LSM58678.205Microcebus_murinus
ENSSLDG00000008014-9378.205ENSMOCG00000012018Lsm58678.205Microtus_ochrogaster
ENSSLDG00000008014-8677.778ENSMMOG00000004026lsm58377.778Mola_mola
ENSSLDG00000008014-6977.586ENSMODG00000013274-9477.586Monodelphis_domestica
ENSSLDG00000008014-6979.310ENSMALG00000010343lsm59479.310Monopterus_albus
ENSSLDG00000008014-9378.205MGP_CAROLIEiJ_G0028421Lsm58678.205Mus_caroli
ENSSLDG00000008014-9378.205ENSMUSG00000091625Lsm58678.205Mus_musculus
ENSSLDG00000008014-9378.205MGP_PahariEiJ_G0022171Lsm58678.205Mus_pahari
ENSSLDG00000008014-9378.205MGP_SPRETEiJ_G0029423Lsm58678.205Mus_spretus
ENSSLDG00000008014-9378.205ENSMLUG00000017028LSM58678.205Myotis_lucifugus
ENSSLDG00000008014-9268.354ENSNGAG00000017707-8468.354Nannospalax_galili
ENSSLDG00000008014-9378.205ENSNGAG00000024142Lsm58678.205Nannospalax_galili
ENSSLDG00000008014-9357.692ENSNGAG00000022569-8257.692Nannospalax_galili
ENSSLDG00000008014-6375.472ENSNBRG00000011386lsm57175.472Neolamprologus_brichardi
ENSSLDG00000008014-9378.205ENSNLEG00000015268LSM58678.205Nomascus_leucogenys
ENSSLDG00000008014-8578.873ENSOPRG00000002443LSM59578.873Ochotona_princeps
ENSSLDG00000008014-9378.205ENSODEG00000008258-8678.205Octodon_degus
ENSSLDG00000008014-9378.205ENSODEG00000019072-8678.205Octodon_degus
ENSSLDG00000008014-8969.333ENSOANG00000014540-10069.333Ornithorhynchus_anatinus
ENSSLDG00000008014-9378.205ENSOCUG00000029043LSM58678.205Oryctolagus_cuniculus
ENSSLDG00000008014-9275.325ENSORLG00020003019lsm58075.325Oryzias_latipes_hni
ENSSLDG00000008014-9376.923ENSORLG00015003338lsm58676.923Oryzias_latipes_hsok
ENSSLDG00000008014-9376.923ENSOMEG00000001078lsm58676.923Oryzias_melastigma
ENSSLDG00000008014-9378.205ENSOGAG00000013892LSM58678.205Otolemur_garnettii
ENSSLDG00000008014-9378.205ENSOARG00000006944LSM58678.205Ovis_aries
ENSSLDG00000008014-9378.205ENSPPAG00000003697-8678.205Pan_paniscus
ENSSLDG00000008014-9378.205ENSPPRG00000002550LSM58678.205Panthera_pardus
ENSSLDG00000008014-9378.205ENSPTIG00000015604LSM58678.205Panthera_tigris_altaica
ENSSLDG00000008014-9378.205ENSPTRG00000019057LSM58678.205Pan_troglodytes
ENSSLDG00000008014-9263.636ENSPTRG00000049488-8464.935Pan_troglodytes
ENSSLDG00000008014-9276.623ENSPANG00000033477-8576.623Papio_anubis
ENSSLDG00000008014-9271.429ENSPANG00000032538-8471.429Papio_anubis
ENSSLDG00000008014-9378.205ENSPANG00000032179-8678.205Papio_anubis
ENSSLDG00000008014-9376.923ENSPKIG00000011910lsm58676.923Paramormyrops_kingsleyae
ENSSLDG00000008014-8679.167ENSPSIG00000014796LSM59779.167Pelodiscus_sinensis
ENSSLDG00000008014-6975.862ENSPMGG00000011699lsm59475.862Periophthalmus_magnuspinnatus
ENSSLDG00000008014-8957.333ENSPEMG00000022375-8057.333Peromyscus_maniculatus_bairdii
ENSSLDG00000008014-9376.923ENSPFOG00000001433lsm58676.923Poecilia_formosa
ENSSLDG00000008014-9376.923ENSPLAG00000009665lsm58676.923Poecilia_latipinna
ENSSLDG00000008014-9376.923ENSPMEG00000022265lsm58676.923Poecilia_mexicana
ENSSLDG00000008014-6975.862ENSPREG00000022452lsm59475.862Poecilia_reticulata
ENSSLDG00000008014-9375.641ENSPPYG00000017661LSM58675.641Pongo_abelii
ENSSLDG00000008014-8677.778ENSPCAG00000013740LSM58977.778Procavia_capensis
ENSSLDG00000008014-9378.205ENSPVAG00000009786LSM58678.205Pteropus_vampyrus
ENSSLDG00000008014-9376.923ENSPNYG00000022236lsm58976.923Pundamilia_nyererei
ENSSLDG00000008014-9376.923ENSPNAG00000001887lsm58676.923Pygocentrus_nattereri
ENSSLDG00000008014-9377.215ENSRNOG00000027305AABR07065089.18677.215Rattus_norvegicus
ENSSLDG00000008014-9378.205ENSRNOG00000042126Lsm58678.205Rattus_norvegicus
ENSSLDG00000008014-9378.205ENSRBIG00000030340-8678.205Rhinopithecus_bieti
ENSSLDG00000008014-9378.205ENSRBIG00000027803-9477.586Rhinopithecus_bieti
ENSSLDG00000008014-9378.205ENSRBIG00000030714-8678.205Rhinopithecus_bieti
ENSSLDG00000008014-9376.923ENSRBIG00000024431-8676.923Rhinopithecus_bieti
ENSSLDG00000008014-9378.205ENSRROG00000023884-8678.205Rhinopithecus_roxellana
ENSSLDG00000008014-9378.205ENSRROG00000042782-9477.586Rhinopithecus_roxellana
ENSSLDG00000008014-9378.205ENSRROG00000004655-8678.205Rhinopithecus_roxellana
ENSSLDG00000008014-9049.383YER146W-8749.383Saccharomyces_cerevisiae
ENSSLDG00000008014-7368.852ENSSBOG00000034794-7668.852Saimiri_boliviensis_boliviensis
ENSSLDG00000008014-9378.205ENSSBOG00000012312LSM58678.205Saimiri_boliviensis_boliviensis
ENSSLDG00000008014-9279.221ENSSBOG00000019124-8579.221Saimiri_boliviensis_boliviensis
ENSSLDG00000008014-9376.923ENSSFOG00015010099lsm58676.923Scleropages_formosus
ENSSLDG00000008014-6975.862ENSSDUG00000010762lsm59475.862Seriola_dumerili
ENSSLDG00000008014-5678.723ENSSARG00000003330LSM55278.723Sorex_araneus
ENSSLDG00000008014-9376.923ENSSPUG00000002690LSM59475.862Sphenodon_punctatus
ENSSLDG00000008014-9378.205ENSSSCG00000026064-8678.205Sus_scrofa
ENSSLDG00000008014-6170.588ENSSSCG00000029661-8170.690Sus_scrofa
ENSSLDG00000008014-9279.221ENSTGUG00000017539LSM58579.221Taeniopygia_guttata
ENSSLDG00000008014-9564.516ENSTRUG00000017749lsm57264.516Takifugu_rubripes
ENSSLDG00000008014-9375.641ENSTNIG00000008695lsm58975.641Tetraodon_nigroviridis
ENSSLDG00000008014-9378.205ENSTBEG00000004876LSM58678.205Tupaia_belangeri
ENSSLDG00000008014-9378.205ENSTTRG00000004237LSM58678.205Tursiops_truncatus
ENSSLDG00000008014-5071.429ENSUAMG00000009786LSM55571.429Ursus_americanus
ENSSLDG00000008014-9875.904ENSUMAG00000002625LSM56075.904Ursus_maritimus
ENSSLDG00000008014-9378.205ENSVPAG00000009985LSM58678.205Vicugna_pacos
ENSSLDG00000008014-9378.205ENSVVUG00000021311LSM58678.205Vulpes_vulpes
ENSSLDG00000008014-8776.712ENSXETG00000026465lsm58976.712Xenopus_tropicalis
ENSSLDG00000008014-6975.862ENSXCOG00000015348lsm59475.862Xiphophorus_couchianus
ENSSLDG00000008014-9376.923ENSXMAG00000029988lsm58676.923Xiphophorus_maculatus

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