EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000008069 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 713 bases
Position: chrPEQF01048707.1:820-1532
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000010127	RRM_1	PF00076.22	1.2e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000010494	-	315	-	ENSSLDP00000010127	105 (aa)	-	-

Gene Model

Click here to download ENSSLDG00000008069's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000008069's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000008069	-	60	33.333	ENSSLDG00000014858	-	67	33.333
ENSSLDG00000008069	-	77	72.840	ENSSLDG00000004903	RALY	81	72.840

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000008069	-	75	77.215	ENSG00000184672	RALYL	93	77.215	Homo_sapiens
ENSSLDG00000008069	-	76	92.500	ENSAPOG00000020641	-	94	92.500	Acanthochromis_polyacanthus
ENSSLDG00000008069	-	75	81.013	ENSAPOG00000005050	RALYL	77	81.013	Acanthochromis_polyacanthus
ENSSLDG00000008069	-	77	79.012	ENSACIG00000001335	-	68	79.012	Amphilophus_citrinellus
ENSSLDG00000008069	-	86	75.556	ENSAPEG00000010582	-	87	75.556	Amphiprion_percula
ENSSLDG00000008069	-	79	80.723	ENSAPEG00000021452	-	80	80.723	Amphiprion_percula
ENSSLDG00000008069	-	90	67.708	ENSCCAG00000025003	RALYL	93	67.708	Cebus_capucinus
ENSSLDG00000008069	-	80	75.000	ENSCSEG00000019406	-	81	75.000	Cynoglossus_semilaevis
ENSSLDG00000008069	-	79	80.723	ENSFHEG00000000223	-	85	80.723	Fundulus_heteroclitus
ENSSLDG00000008069	-	81	78.824	ENSFHEG00000017466	-	59	78.824	Fundulus_heteroclitus
ENSSLDG00000008069	-	89	72.043	ENSGAFG00000018541	RALYL	87	72.043	Gambusia_affinis
ENSSLDG00000008069	-	77	80.247	ENSGAFG00000020052	-	79	80.247	Gambusia_affinis
ENSSLDG00000008069	-	76	80.000	ENSHCOG00000002851	-	73	80.000	Hippocampus_comes
ENSSLDG00000008069	-	76	78.750	ENSHCOG00000012719	-	78	78.750	Hippocampus_comes
ENSSLDG00000008069	-	75	79.747	ENSLACG00000000135	-	89	79.747	Latimeria_chalumnae
ENSSLDG00000008069	-	96	76.238	ENSMMUG00000003920	-	99	76.238	Macaca_mulatta
ENSSLDG00000008069	-	86	73.333	ENSMAMG00000011137	RALYL	93	73.333	Mastacembelus_armatus
ENSSLDG00000008069	-	80	75.000	ENSMICG00000005558	RALYL	85	75.000	Microcebus_murinus
ENSSLDG00000008069	-	98	66.990	ENSMMOG00000004599	-	95	66.990	Mola_mola
ENSSLDG00000008069	-	77	76.543	ENSMODG00000029239	-	79	76.543	Monodelphis_domestica
ENSSLDG00000008069	-	79	74.699	ENSMUSG00000039717	Ralyl	93	75.949	Mus_musculus
ENSSLDG00000008069	-	77	76.543	ENSOANG00000030197	-	54	76.543	Ornithorhynchus_anatinus
ENSSLDG00000008069	-	75	78.481	ENSPKIG00000023807	RALYL	81	78.481	Paramormyrops_kingsleyae
ENSSLDG00000008069	-	77	76.543	ENSPCIG00000023938	-	70	76.543	Phascolarctos_cinereus
ENSSLDG00000008069	-	76	77.500	ENSRROG00000023925	RALYL	81	77.500	Rhinopithecus_roxellana
ENSSLDG00000008069	-	76	96.250	ENSSFOG00015012924	-	81	96.250	Scleropages_formosus
ENSSLDG00000008069	-	87	72.527	ENSSPAG00000014679	-	96	72.527	Stegastes_partitus
ENSSLDG00000008069	-	77	79.012	ENSTRUG00000021320	RALYL	88	79.012	Takifugu_rubripes
ENSSLDG00000008069	-	77	95.062	ENSTRUG00000002153	-	61	95.062	Takifugu_rubripes
ENSSLDG00000008069	-	89	80.645	ENSUAMG00000006020	-	92	80.645	Ursus_americanus
ENSSLDG00000008069	-	94	70.000	ENSXCOG00000016096	-	86	70.000	Xiphophorus_couchianus