EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000008115 (Gene tree)
Gene ID: -
Gene Symbol: prpf4
Alias: mg:ab03a02|zgc:65943
Full Name: pre-mRNA processing factor 4
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 8591 bases
Position: chrPEQF01099324.1:194915-203505
Accession: 111670247
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000010182	PRP4	PF08799.11	2.4e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000010551	-	2494	XM_023426894	ENSSLDP00000010182	514 (aa)	XP_023282662	-

Gene Model

Click here to download ENSSLDG00000008115's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000008115's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000008115	prpf4	54	30.204	ENSSLDG00000021297	wdr5	89	30.204
ENSSLDG00000008115	prpf4	64	30.097	ENSSLDG00000005696	-	72	30.097
ENSSLDG00000008115	prpf4	52	31.515	ENSSLDG00000023733	tbl3	56	30.469

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000008115	prpf4	98	73.904	ENSG00000136875	PRPF4	96	73.705	Homo_sapiens
ENSSLDG00000008115	prpf4	96	94.715	ENSAPOG00000014132	prpf4	100	94.715	Acanthochromis_polyacanthus
ENSSLDG00000008115	prpf4	98	73.904	ENSAMEG00000013048	PRPF4	94	73.705	Ailuropoda_melanoleuca
ENSSLDG00000008115	prpf4	94	95.031	ENSACIG00000005579	prpf4	99	95.031	Amphilophus_citrinellus
ENSSLDG00000008115	prpf4	94	94.617	ENSAOCG00000005457	prpf4	99	94.617	Amphiprion_ocellaris
ENSSLDG00000008115	prpf4	94	94.410	ENSAPEG00000000776	prpf4	99	94.410	Amphiprion_percula
ENSSLDG00000008115	prpf4	94	95.031	ENSATEG00000023013	prpf4	99	95.031	Anabas_testudineus
ENSSLDG00000008115	prpf4	98	74.059	ENSAPLG00000006534	PRPF4	94	73.861	Anas_platyrhynchos
ENSSLDG00000008115	prpf4	94	76.033	ENSACAG00000015110	PRPF4	97	75.620	Anolis_carolinensis
ENSSLDG00000008115	prpf4	98	73.904	ENSANAG00000022464	PRPF4	93	73.705	Aotus_nancymaae
ENSSLDG00000008115	prpf4	94	94.410	ENSACLG00000019031	prpf4	99	94.410	Astatotilapia_calliptera
ENSSLDG00000008115	prpf4	90	64.768	ENSAMXG00000006756	prpf4	94	73.292	Astyanax_mexicanus
ENSSLDG00000008115	prpf4	98	73.904	ENSBTAG00000004571	PRPF4	96	73.705	Bos_taurus
ENSSLDG00000008115	prpf4	87	43.459	WBGene00007972	prp-4	90	43.750	Caenorhabditis_elegans
ENSSLDG00000008115	prpf4	98	73.904	ENSCJAG00000017856	PRPF4	96	73.705	Callithrix_jacchus
ENSSLDG00000008115	prpf4	98	73.904	ENSCAFG00000003224	PRPF4	93	73.705	Canis_familiaris
ENSSLDG00000008115	prpf4	98	73.904	ENSCAFG00020022637	PRPF4	97	73.705	Canis_lupus_dingo
ENSSLDG00000008115	prpf4	98	73.904	ENSCHIG00000024648	-	96	73.705	Capra_hircus
ENSSLDG00000008115	prpf4	98	74.104	ENSTSYG00000010366	PRPF4	96	73.904	Carlito_syrichta
ENSSLDG00000008115	prpf4	81	68.735	ENSCAPG00000008935	PRPF4	97	68.735	Cavia_aperea
ENSSLDG00000008115	prpf4	98	73.506	ENSCPOG00000010747	-	96	73.307	Cavia_porcellus
ENSSLDG00000008115	prpf4	98	68.725	ENSCPOG00000014729	-	96	68.526	Cavia_porcellus
ENSSLDG00000008115	prpf4	98	73.705	ENSCCAG00000028990	PRPF4	96	73.506	Cebus_capucinus
ENSSLDG00000008115	prpf4	98	73.904	ENSCATG00000021552	PRPF4	96	73.705	Cercocebus_atys
ENSSLDG00000008115	prpf4	98	73.904	ENSCLAG00000013448	PRPF4	96	73.705	Chinchilla_lanigera
ENSSLDG00000008115	prpf4	83	76.235	ENSCHOG00000007233	PRPF4	100	76.235	Choloepus_hoffmanni
ENSSLDG00000008115	prpf4	99	73.031	ENSCPBG00000019136	PRPF4	73	73.069	Chrysemys_picta_bellii
ENSSLDG00000008115	prpf4	92	58.750	ENSCING00000001299	-	95	58.542	Ciona_intestinalis
ENSSLDG00000008115	prpf4	95	56.939	ENSCSAVG00000009178	-	100	58.676	Ciona_savignyi
ENSSLDG00000008115	prpf4	98	73.904	ENSCANG00000003246	PRPF4	96	73.705	Colobus_angolensis_palliatus
ENSSLDG00000008115	prpf4	98	73.705	ENSCGRG00001016992	Prpf4	96	73.506	Cricetulus_griseus_chok1gshd
ENSSLDG00000008115	prpf4	98	73.705	ENSCGRG00000017560	Prpf4	96	73.506	Cricetulus_griseus_crigri
ENSSLDG00000008115	prpf4	94	87.785	ENSCSEG00000020451	prpf4	99	87.578	Cynoglossus_semilaevis
ENSSLDG00000008115	prpf4	94	80.124	ENSDARG00000067639	prpf4	99	80.124	Danio_rerio
ENSSLDG00000008115	prpf4	93	76.520	ENSDNOG00000013203	PRPF4	96	76.310	Dasypus_novemcinctus
ENSSLDG00000008115	prpf4	98	74.104	ENSDORG00000026275	Prpf4	96	73.904	Dipodomys_ordii
ENSSLDG00000008115	prpf4	94	49.905	FBgn0036733	U4-U6-60K	99	49.905	Drosophila_melanogaster
ENSSLDG00000008115	prpf4	98	74.502	ENSETEG00000020389	PRPF4	96	74.303	Echinops_telfairi
ENSSLDG00000008115	prpf4	86	68.315	ENSEBUG00000015229	prpf4	88	68.764	Eptatretus_burgeri
ENSSLDG00000008115	prpf4	98	73.904	ENSEASG00005022678	PRPF4	96	73.705	Equus_asinus_asinus
ENSSLDG00000008115	prpf4	98	73.904	ENSECAG00000007072	PRPF4	96	73.705	Equus_caballus
ENSSLDG00000008115	prpf4	71	81.172	ENSEEUG00000007480	PRPF4	96	60.909	Erinaceus_europaeus
ENSSLDG00000008115	prpf4	94	81.781	ENSELUG00000007510	prpf4	99	81.781	Esox_lucius
ENSSLDG00000008115	prpf4	98	73.904	ENSFCAG00000005514	PRPF4	96	73.705	Felis_catus
ENSSLDG00000008115	prpf4	86	75.395	ENSFALG00000005423	PRPF4	85	75.621	Ficedula_albicollis
ENSSLDG00000008115	prpf4	98	73.904	ENSFDAG00000005839	PRPF4	96	73.705	Fukomys_damarensis
ENSSLDG00000008115	prpf4	94	91.097	ENSFHEG00000001300	prpf4	99	91.097	Fundulus_heteroclitus
ENSSLDG00000008115	prpf4	93	76.458	ENSGALG00000008857	PRPF4	94	73.663	Gallus_gallus
ENSSLDG00000008115	prpf4	90	89.362	ENSGAFG00000012164	prpf4	70	89.362	Gambusia_affinis
ENSSLDG00000008115	prpf4	94	82.474	ENSGACG00000015476	prpf4	99	82.268	Gasterosteus_aculeatus
ENSSLDG00000008115	prpf4	98	72.871	ENSGAGG00000025029	PRPF4	94	72.673	Gopherus_agassizii
ENSSLDG00000008115	prpf4	98	73.904	ENSGGOG00000006943	PRPF4	96	73.705	Gorilla_gorilla
ENSSLDG00000008115	prpf4	94	94.410	ENSHBUG00000000562	prpf4	100	94.410	Haplochromis_burtoni
ENSSLDG00000008115	prpf4	98	74.104	ENSHGLG00000015191	PRPF4	96	73.904	Heterocephalus_glaber_female
ENSSLDG00000008115	prpf4	98	58.964	ENSHGLG00000003838	-	93	58.765	Heterocephalus_glaber_female
ENSSLDG00000008115	prpf4	94	63.655	ENSHGLG00000016628	-	92	63.860	Heterocephalus_glaber_female
ENSSLDG00000008115	prpf4	98	58.964	ENSHGLG00100005571	-	93	58.765	Heterocephalus_glaber_male
ENSSLDG00000008115	prpf4	94	80.124	ENSIPUG00000017956	PRPF4	99	79.917	Ictalurus_punctatus
ENSSLDG00000008115	prpf4	98	73.904	ENSSTOG00000027833	PRPF4	96	73.705	Ictidomys_tridecemlineatus
ENSSLDG00000008115	prpf4	98	73.904	ENSJJAG00000008838	Prpf4	96	73.705	Jaculus_jaculus
ENSSLDG00000008115	prpf4	94	91.511	ENSKMAG00000013236	prpf4	99	91.511	Kryptolebias_marmoratus
ENSSLDG00000008115	prpf4	94	95.652	ENSLBEG00000020611	prpf4	99	95.652	Labrus_bergylta
ENSSLDG00000008115	prpf4	99	69.608	ENSLACG00000016317	PRPF4	97	69.412	Latimeria_chalumnae
ENSSLDG00000008115	prpf4	99	78.346	ENSLOCG00000000581	prpf4	99	78.346	Lepisosteus_oculatus
ENSSLDG00000008115	prpf4	98	73.904	ENSLAFG00000018225	PRPF4	96	73.705	Loxodonta_africana
ENSSLDG00000008115	prpf4	98	73.705	ENSMFAG00000039397	PRPF4	96	73.506	Macaca_fascicularis
ENSSLDG00000008115	prpf4	98	73.904	ENSMMUG00000005844	PRPF4	96	73.705	Macaca_mulatta
ENSSLDG00000008115	prpf4	98	65.139	ENSMNEG00000033737	PRPF4	96	64.940	Macaca_nemestrina
ENSSLDG00000008115	prpf4	98	73.904	ENSMLEG00000040284	PRPF4	96	73.705	Mandrillus_leucophaeus
ENSSLDG00000008115	prpf4	94	94.824	ENSMAMG00000020141	prpf4	99	94.824	Mastacembelus_armatus
ENSSLDG00000008115	prpf4	94	94.410	ENSMZEG00005023205	prpf4	99	94.410	Maylandia_zebra
ENSSLDG00000008115	prpf4	93	75.833	ENSMGAG00000001796	PRPF4	94	75.625	Meleagris_gallopavo
ENSSLDG00000008115	prpf4	98	73.705	ENSMAUG00000018022	Prpf4	96	73.506	Mesocricetus_auratus
ENSSLDG00000008115	prpf4	99	73.373	ENSMICG00000015022	PRPF4	97	73.176	Microcebus_murinus
ENSSLDG00000008115	prpf4	98	73.705	ENSMOCG00000018273	Prpf4	96	73.506	Microtus_ochrogaster
ENSSLDG00000008115	prpf4	94	90.890	ENSMMOG00000021177	prpf4	99	90.476	Mola_mola
ENSSLDG00000008115	prpf4	99	72.387	ENSMODG00000025096	-	94	72.189	Monodelphis_domestica
ENSSLDG00000008115	prpf4	99	73.176	ENSMODG00000004444	-	97	72.781	Monodelphis_domestica
ENSSLDG00000008115	prpf4	94	96.273	ENSMALG00000013624	prpf4	99	96.273	Monopterus_albus
ENSSLDG00000008115	prpf4	98	73.705	MGP_CAROLIEiJ_G0026078	Prpf4	96	73.506	Mus_caroli
ENSSLDG00000008115	prpf4	98	73.705	ENSMUSG00000066148	Prpf4	96	73.506	Mus_musculus
ENSSLDG00000008115	prpf4	98	73.904	MGP_PahariEiJ_G0028413	Prpf4	96	73.705	Mus_pahari
ENSSLDG00000008115	prpf4	98	73.705	MGP_SPRETEiJ_G0027042	Prpf4	96	73.506	Mus_spretus
ENSSLDG00000008115	prpf4	98	73.904	ENSMPUG00000007883	PRPF4	96	73.705	Mustela_putorius_furo
ENSSLDG00000008115	prpf4	93	75.681	ENSMLUG00000008626	-	94	75.472	Myotis_lucifugus
ENSSLDG00000008115	prpf4	98	73.904	ENSMLUG00000015309	-	93	73.705	Myotis_lucifugus
ENSSLDG00000008115	prpf4	98	68.725	ENSNGAG00000000468	Prpf4	96	68.526	Nannospalax_galili
ENSSLDG00000008115	prpf4	94	94.410	ENSNBRG00000007972	prpf4	99	94.410	Neolamprologus_brichardi
ENSSLDG00000008115	prpf4	98	73.904	ENSNLEG00000016647	PRPF4	96	73.705	Nomascus_leucogenys
ENSSLDG00000008115	prpf4	99	72.781	ENSMEUG00000013256	PRPF4	99	72.387	Notamacropus_eugenii
ENSSLDG00000008115	prpf4	98	73.705	ENSOPRG00000005302	PRPF4	96	73.904	Ochotona_princeps
ENSSLDG00000008115	prpf4	98	73.904	ENSODEG00000018147	PRPF4	96	73.705	Octodon_degus
ENSSLDG00000008115	prpf4	94	94.824	ENSONIG00000012671	prpf4	99	94.824	Oreochromis_niloticus
ENSSLDG00000008115	prpf4	98	73.904	ENSOCUG00000005046	PRPF4	96	73.705	Oryctolagus_cuniculus
ENSSLDG00000008115	prpf4	94	90.062	ENSORLG00000019641	prpf4	99	90.062	Oryzias_latipes
ENSSLDG00000008115	prpf4	94	90.062	ENSORLG00020019438	prpf4	99	90.062	Oryzias_latipes_hni
ENSSLDG00000008115	prpf4	94	89.441	ENSOMEG00000020941	prpf4	100	89.441	Oryzias_melastigma
ENSSLDG00000008115	prpf4	98	69.721	ENSOGAG00000007802	PRPF4	94	69.522	Otolemur_garnettii
ENSSLDG00000008115	prpf4	98	73.904	ENSOARG00000006319	PRPF4	93	73.705	Ovis_aries
ENSSLDG00000008115	prpf4	98	73.904	ENSPPAG00000041797	PRPF4	96	73.705	Pan_paniscus
ENSSLDG00000008115	prpf4	98	73.904	ENSPPRG00000014360	PRPF4	96	73.705	Panthera_pardus
ENSSLDG00000008115	prpf4	98	73.904	ENSPTIG00000009574	PRPF4	96	73.705	Panthera_tigris_altaica
ENSSLDG00000008115	prpf4	98	73.904	ENSPTRG00000021274	PRPF4	96	73.705	Pan_troglodytes
ENSSLDG00000008115	prpf4	98	74.104	ENSPANG00000025776	PRPF4	92	73.904	Papio_anubis
ENSSLDG00000008115	prpf4	99	78.150	ENSPKIG00000017259	prpf4	99	77.953	Paramormyrops_kingsleyae
ENSSLDG00000008115	prpf4	98	73.069	ENSPSIG00000010713	PRPF4	89	72.871	Pelodiscus_sinensis
ENSSLDG00000008115	prpf4	99	61.567	ENSPMGG00000000997	prpf4	96	62.500	Periophthalmus_magnuspinnatus
ENSSLDG00000008115	prpf4	98	73.705	ENSPEMG00000024115	Prpf4	96	73.506	Peromyscus_maniculatus_bairdii
ENSSLDG00000008115	prpf4	99	72.978	ENSPCIG00000003821	PRPF4	98	72.584	Phascolarctos_cinereus
ENSSLDG00000008115	prpf4	90	88.754	ENSPFOG00000013524	prpf4	99	88.754	Poecilia_formosa
ENSSLDG00000008115	prpf4	89	87.385	ENSPLAG00000011620	prpf4	97	87.307	Poecilia_latipinna
ENSSLDG00000008115	prpf4	92	89.086	ENSPMEG00000006813	prpf4	100	89.086	Poecilia_mexicana
ENSSLDG00000008115	prpf4	98	73.705	ENSPCAG00000002561	PRPF4	98	73.506	Procavia_capensis
ENSSLDG00000008115	prpf4	98	73.705	ENSPCOG00000011975	PRPF4	96	73.506	Propithecus_coquereli
ENSSLDG00000008115	prpf4	98	70.717	ENSPVAG00000004708	PRPF4	96	70.518	Pteropus_vampyrus
ENSSLDG00000008115	prpf4	94	94.617	ENSPNYG00000008013	prpf4	99	94.617	Pundamilia_nyererei
ENSSLDG00000008115	prpf4	94	80.952	ENSPNAG00000000697	prpf4	99	80.745	Pygocentrus_nattereri
ENSSLDG00000008115	prpf4	98	73.705	ENSRNOG00000014777	Prpf4	96	73.506	Rattus_norvegicus
ENSSLDG00000008115	prpf4	98	73.904	ENSRBIG00000040221	PRPF4	96	73.705	Rhinopithecus_bieti
ENSSLDG00000008115	prpf4	98	73.904	ENSRROG00000040240	PRPF4	96	73.705	Rhinopithecus_roxellana
ENSSLDG00000008115	prpf4	99	72.978	ENSSHAG00000017658	PRPF4	97	72.584	Sarcophilus_harrisii
ENSSLDG00000008115	prpf4	99	79.134	ENSSFOG00015008963	prpf4	99	78.740	Scleropages_formosus
ENSSLDG00000008115	prpf4	94	93.375	ENSSMAG00000008889	prpf4	99	93.375	Scophthalmus_maximus
ENSSLDG00000008115	prpf4	100	98.833	ENSSDUG00000022083	prpf4	100	98.833	Seriola_dumerili
ENSSLDG00000008115	prpf4	99	73.176	ENSSPUG00000015582	PRPF4	97	72.978	Sphenodon_punctatus
ENSSLDG00000008115	prpf4	94	87.860	ENSSPAG00000011286	prpf4	99	87.860	Stegastes_partitus
ENSSLDG00000008115	prpf4	98	73.904	ENSSSCG00000024648	PRPF4	96	73.705	Sus_scrofa
ENSSLDG00000008115	prpf4	96	74.645	ENSTGUG00000002623	PRPF4	100	77.586	Taeniopygia_guttata
ENSSLDG00000008115	prpf4	94	89.027	ENSTRUG00000008853	prpf4	99	88.820	Takifugu_rubripes
ENSSLDG00000008115	prpf4	94	89.027	ENSTNIG00000013250	prpf4	99	88.820	Tetraodon_nigroviridis
ENSSLDG00000008115	prpf4	98	66.733	ENSTBEG00000000821	PRPF4	96	66.534	Tupaia_belangeri
ENSSLDG00000008115	prpf4	83	78.188	ENSTTRG00000003246	PRPF4	79	78.188	Tursiops_truncatus
ENSSLDG00000008115	prpf4	69	66.949	ENSUAMG00000018288	PRPF4	95	66.667	Ursus_americanus
ENSSLDG00000008115	prpf4	98	73.307	ENSUMAG00000019375	PRPF4	96	73.108	Ursus_maritimus
ENSSLDG00000008115	prpf4	98	73.506	ENSVPAG00000005281	PRPF4	96	73.307	Vicugna_pacos
ENSSLDG00000008115	prpf4	98	73.123	ENSVVUG00000002476	PRPF4	99	73.069	Vulpes_vulpes
ENSSLDG00000008115	prpf4	70	64.011	ENSXCOG00000006101	prpf4	86	64.660	Xiphophorus_couchianus
ENSSLDG00000008115	prpf4	90	76.989	ENSXMAG00000002750	prpf4	94	77.019	Xiphophorus_maculatus