EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000008305 (Gene tree)
Gene ID: -
Gene Symbol: rbck1
Alias: zgc:91964
Full Name: RANBP2-type and C3HC4-type zinc finger containing 1
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 7367 bases
Position: chrPEQF01099284.1:314168-321534
Accession: 111669673
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000010411	zf-RanBP	PF00641.18	2.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000010789	-	3832	XM_023426068	ENSSLDP00000010411	524 (aa)	XP_023281836	UPI000C6F82F2

Gene Model

Click here to download ENSSLDG00000008305's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000008305's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000008305	rbck1	99	45.803	ENSSLDG00000009026	shrprbck1r	76	44.954

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000008305	rbck1	100	81.179	ENSACLG00000020380	rbck1	100	81.679	Astatotilapia_calliptera
ENSSLDG00000008305	rbck1	98	58.189	ENSAMXG00000004941	rbck1	98	58.189	Astyanax_mexicanus
ENSSLDG00000008305	rbck1	100	76.952	ENSCVAG00000002649	rbck1	100	76.000	Cyprinodon_variegatus
ENSSLDG00000008305	rbck1	99	63.878	ENSELUG00000022786	rbck1	98	62.879	Esox_lucius
ENSSLDG00000008305	rbck1	100	76.762	ENSFHEG00000016918	rbck1	100	76.000	Fundulus_heteroclitus
ENSSLDG00000008305	rbck1	100	81.179	ENSHBUG00000008208	rbck1	100	81.679	Haplochromis_burtoni
ENSSLDG00000008305	rbck1	100	81.179	ENSMZEG00005005317	rbck1	100	81.679	Maylandia_zebra
ENSSLDG00000008305	rbck1	84	77.551	ENSNBRG00000006179	rbck1	90	78.132	Neolamprologus_brichardi
ENSSLDG00000008305	rbck1	98	81.323	ENSONIG00000006803	rbck1	99	81.836	Oreochromis_niloticus
ENSSLDG00000008305	rbck1	99	80.268	ENSPNYG00000012666	rbck1	99	80.769	Pundamilia_nyererei
ENSSLDG00000008305	rbck1	100	99.429	ENSSDUG00000023631	rbck1	100	99.429	Seriola_dumerili
ENSSLDG00000008305	rbck1	99	83.044	ENSSPAG00000009432	rbck1	99	83.044	Stegastes_partitus