EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000008400 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 4449 bases
Position: chrPEQF01099057.1:1137292-1141740
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000010535	RVT_1	PF00078.27	4.3e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000010919	-	675	-	ENSSLDP00000010535	224 (aa)	-	-

Gene Model

Click here to download ENSSLDG00000008400's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000008400's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000008400	-	72	31.737	ENSSLDG00000004927	-	68	31.737
ENSSLDG00000008400	-	83	30.846	ENSSLDG00000008649	-	66	30.846

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000008400	-	75	34.615	ENSACIG00000023684	-	83	34.615	Amphilophus_citrinellus
ENSSLDG00000008400	-	85	32.821	ENSACIG00000022447	-	73	32.821	Amphilophus_citrinellus
ENSSLDG00000008400	-	80	32.308	ENSAOCG00000004500	-	60	30.837	Amphiprion_ocellaris
ENSSLDG00000008400	-	78	54.211	ENSAOCG00000018248	-	75	54.211	Amphiprion_ocellaris
ENSSLDG00000008400	-	74	32.620	ENSACAG00000010816	-	53	32.620	Anolis_carolinensis
ENSSLDG00000008400	-	76	32.796	ENSACLG00000012369	-	63	32.796	Astatotilapia_calliptera
ENSSLDG00000008400	-	85	34.300	ENSAMXG00000040763	-	53	34.300	Astyanax_mexicanus
ENSSLDG00000008400	-	92	36.058	ENSCVAG00000000484	-	73	36.058	Cyprinodon_variegatus
ENSSLDG00000008400	-	78	32.386	ENSHBUG00000023598	-	70	32.386	Haplochromis_burtoni
ENSSLDG00000008400	-	80	30.348	ENSIPUG00000010242	-	53	30.348	Ictalurus_punctatus
ENSSLDG00000008400	-	85	38.164	ENSLACG00000022331	-	62	38.164	Latimeria_chalumnae
ENSSLDG00000008400	-	90	44.700	ENSMMOG00000007110	-	80	44.700	Mola_mola
ENSSLDG00000008400	-	73	49.438	ENSMMOG00000003125	-	60	49.438	Mola_mola
ENSSLDG00000008400	-	79	31.088	ENSNBRG00000016257	-	67	31.088	Neolamprologus_brichardi
ENSSLDG00000008400	-	85	33.333	ENSORLG00000028976	-	54	33.333	Oryzias_latipes
ENSSLDG00000008400	-	85	38.614	ENSORLG00020007779	-	53	38.614	Oryzias_latipes_hni
ENSSLDG00000008400	-	85	36.946	ENSORLG00020018629	-	54	36.946	Oryzias_latipes_hni
ENSSLDG00000008400	-	85	37.438	ENSORLG00015007703	-	52	37.438	Oryzias_latipes_hsok
ENSSLDG00000008400	-	85	37.438	ENSORLG00015007976	-	55	37.438	Oryzias_latipes_hsok
ENSSLDG00000008400	-	59	34.694	ENSOMEG00000008379	-	50	34.694	Oryzias_melastigma
ENSSLDG00000008400	-	92	34.821	ENSPMEG00000003715	-	75	34.821	Poecilia_mexicana
ENSSLDG00000008400	-	86	53.589	ENSPNYG00000012547	-	68	53.589	Pundamilia_nyererei
ENSSLDG00000008400	-	69	32.335	ENSPNYG00000000591	-	78	32.335	Pundamilia_nyererei
ENSSLDG00000008400	-	70	30.460	ENSPNYG00000006014	-	68	30.460	Pundamilia_nyererei
ENSSLDG00000008400	-	70	31.953	ENSPNYG00000022953	-	75	31.953	Pundamilia_nyererei
ENSSLDG00000008400	-	85	30.918	ENSPNAG00000014375	-	50	30.918	Pygocentrus_nattereri
ENSSLDG00000008400	-	67	35.976	ENSXCOG00000013172	-	75	35.976	Xiphophorus_couchianus