EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000008502 (Gene tree)
Gene ID: -
Gene Symbol: zgc:162730
Alias: fi61b04|wu:fi61b04
Full Name: mRNA decay activator protein ZFP36L1-like
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 4697 bases
Position: chrPEQF01099015.1:127989-132685
Accession: 111661112
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000010680	zf-CCCH	PF00642.24	3e-21	1	2
ENSSLDP00000010680	zf-CCCH	PF00642.24	3e-21	2	2
ENSSLDP00000010662	zf-CCCH	PF00642.24	3.9e-21	1	2
ENSSLDP00000010662	zf-CCCH	PF00642.24	3.9e-21	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000011072	-	1164	-	ENSSLDP00000010680	387 (aa)	-	-
ENSSLDT00000011054	-	4120	XM_023414576	ENSSLDP00000010662	432 (aa)	XP_023270344	UPI000C6FB400

Gene Model

Click here to download ENSSLDG00000008502's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000008502's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000008502	zgc:162730	99	34.698	ENSSLDG00000018035	sb:cb81	97	36.674
ENSSLDG00000008502	zgc:162730	98	32.949	ENSSLDG00000008496	zgc:114130	67	36.111

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000008502	zgc:162730	82	37.971	ENSAPOG00000011209	sb:cb81	86	39.474	Acanthochromis_polyacanthus
ENSSLDG00000008502	zgc:162730	100	84.028	ENSAPOG00000014920	zgc:162730	100	84.028	Acanthochromis_polyacanthus
ENSSLDG00000008502	zgc:162730	58	77.778	ENSACIG00000017366	zgc:162730	97	76.444	Amphilophus_citrinellus
ENSSLDG00000008502	zgc:162730	99	35.198	ENSACIG00000009027	sb:cb81	62	41.343	Amphilophus_citrinellus
ENSSLDG00000008502	zgc:162730	66	40.293	ENSACIG00000016314	zfp36l1a	68	40.000	Amphilophus_citrinellus
ENSSLDG00000008502	zgc:162730	99	35.309	ENSAOCG00000024158	sb:cb81	64	43.704	Amphiprion_ocellaris
ENSSLDG00000008502	zgc:162730	100	83.565	ENSAOCG00000002001	zgc:162730	100	84.722	Amphiprion_ocellaris
ENSSLDG00000008502	zgc:162730	99	34.815	ENSAPEG00000022405	sb:cb81	64	43.333	Amphiprion_percula
ENSSLDG00000008502	zgc:162730	94	84.521	ENSAPEG00000015490	zgc:162730	99	85.749	Amphiprion_percula
ENSSLDG00000008502	zgc:162730	65	39.483	ENSATEG00000008781	zgc:114130	63	39.781	Anabas_testudineus
ENSSLDG00000008502	zgc:162730	99	34.722	ENSATEG00000003462	sb:cb81	61	41.007	Anabas_testudineus
ENSSLDG00000008502	zgc:162730	100	80.184	ENSATEG00000008790	zgc:162730	100	82.028	Anabas_testudineus
ENSSLDG00000008502	zgc:162730	99	35.349	ENSACLG00000013759	sb:cb81	62	42.308	Astatotilapia_calliptera
ENSSLDG00000008502	zgc:162730	65	34.965	ENSACLG00000022113	zgc:114130	63	34.694	Astatotilapia_calliptera
ENSSLDG00000008502	zgc:162730	100	76.620	ENSACLG00000022112	zgc:162730	100	72.893	Astatotilapia_calliptera
ENSSLDG00000008502	zgc:162730	73	42.244	ENSAMXG00000034874	sb:cb81	97	36.342	Astyanax_mexicanus
ENSSLDG00000008502	zgc:162730	100	48.241	ENSAMXG00000035945	zgc:162730	99	48.000	Astyanax_mexicanus
ENSSLDG00000008502	zgc:162730	66	39.194	ENSCLAG00000003695	ZFP36L1	67	38.889	Chinchilla_lanigera
ENSSLDG00000008502	zgc:162730	98	78.251	ENSCSEG00000018283	zgc:162730	95	79.730	Cynoglossus_semilaevis
ENSSLDG00000008502	zgc:162730	99	34.146	ENSCSEG00000014426	sb:cb81	83	34.694	Cynoglossus_semilaevis
ENSSLDG00000008502	zgc:162730	99	34.426	ENSCVAG00000009207	sb:cb81	63	43.110	Cyprinodon_variegatus
ENSSLDG00000008502	zgc:162730	100	71.296	ENSCVAG00000018571	zgc:162730	100	70.602	Cyprinodon_variegatus
ENSSLDG00000008502	zgc:162730	66	41.603	ENSDARG00000021443	zfp36l1b	62	39.924	Danio_rerio
ENSSLDG00000008502	zgc:162730	99	37.717	ENSDARG00000040503	sb:cb81	97	36.634	Danio_rerio
ENSSLDG00000008502	zgc:162730	82	54.489	ENSDARG00000103720	zgc:162730	89	55.077	Danio_rerio
ENSSLDG00000008502	zgc:162730	100	56.281	ENSELUG00000013158	zgc:162730	100	54.613	Esox_lucius
ENSSLDG00000008502	zgc:162730	66	37.407	ENSELUG00000008675	zfp36l1b	61	36.782	Esox_lucius
ENSSLDG00000008502	zgc:162730	99	37.292	ENSELUG00000013045	sb:cb81	97	35.867	Esox_lucius
ENSSLDG00000008502	zgc:162730	99	34.884	ENSFHEG00000022187	sb:cb81	97	36.384	Fundulus_heteroclitus
ENSSLDG00000008502	zgc:162730	100	73.611	ENSFHEG00000013710	zgc:162730	100	72.917	Fundulus_heteroclitus
ENSSLDG00000008502	zgc:162730	65	35.336	ENSGMOG00000017223	zgc:114130	81	36.429	Gadus_morhua
ENSSLDG00000008502	zgc:162730	67	38.722	ENSGMOG00000016803	sb:cb81	93	41.516	Gadus_morhua
ENSSLDG00000008502	zgc:162730	80	68.208	ENSGMOG00000017242	zgc:162730	100	70.662	Gadus_morhua
ENSSLDG00000008502	zgc:162730	100	73.611	ENSGAFG00000009953	zgc:162730	100	72.917	Gambusia_affinis
ENSSLDG00000008502	zgc:162730	99	35.980	ENSGAFG00000015700	sb:cb81	78	40.653	Gambusia_affinis
ENSSLDG00000008502	zgc:162730	84	37.297	ENSGACG00000013400	sb:cb81	98	39.306	Gasterosteus_aculeatus
ENSSLDG00000008502	zgc:162730	69	40.925	ENSGACG00000011271	zfp36l1a	69	41.577	Gasterosteus_aculeatus
ENSSLDG00000008502	zgc:162730	56	40.586	ENSGACG00000008344	zgc:114130	53	46.196	Gasterosteus_aculeatus
ENSSLDG00000008502	zgc:162730	77	77.287	ENSGACG00000008351	zgc:162730	100	76.972	Gasterosteus_aculeatus
ENSSLDG00000008502	zgc:162730	99	35.335	ENSHBUG00000002383	sb:cb81	97	34.924	Haplochromis_burtoni
ENSSLDG00000008502	zgc:162730	100	76.852	ENSHBUG00000015057	zgc:162730	100	73.121	Haplochromis_burtoni
ENSSLDG00000008502	zgc:162730	66	40.000	ENSHCOG00000013932	zfp36l1a	65	38.732	Hippocampus_comes
ENSSLDG00000008502	zgc:162730	57	33.784	ENSHCOG00000012747	zfp36l1b	91	30.317	Hippocampus_comes
ENSSLDG00000008502	zgc:162730	84	34.197	ENSHCOG00000000792	sb:cb81	65	37.662	Hippocampus_comes
ENSSLDG00000008502	zgc:162730	100	74.483	ENSHCOG00000015801	zgc:162730	100	74.483	Hippocampus_comes
ENSSLDG00000008502	zgc:162730	63	40.377	ENSIPUG00000011378	sb:cb81	79	38.906	Ictalurus_punctatus
ENSSLDG00000008502	zgc:162730	100	49.377	ENSIPUG00000018248	zgc:162730	100	48.635	Ictalurus_punctatus
ENSSLDG00000008502	zgc:162730	66	38.113	ENSKMAG00000013156	zfp36l1a	62	39.623	Kryptolebias_marmoratus
ENSSLDG00000008502	zgc:162730	99	34.588	ENSKMAG00000009884	sb:cb81	97	37.529	Kryptolebias_marmoratus
ENSSLDG00000008502	zgc:162730	100	75.576	ENSKMAG00000019277	zgc:162730	100	75.115	Kryptolebias_marmoratus
ENSSLDG00000008502	zgc:162730	100	81.379	ENSLBEG00000018380	zgc:162730	100	81.609	Labrus_bergylta
ENSSLDG00000008502	zgc:162730	98	33.735	ENSLBEG00000018387	zgc:114130	65	39.502	Labrus_bergylta
ENSSLDG00000008502	zgc:162730	99	31.469	ENSLBEG00000018376	sb:cb81	97	33.721	Labrus_bergylta
ENSSLDG00000008502	zgc:162730	100	38.517	ENSLACG00000015980	-	85	42.450	Latimeria_chalumnae
ENSSLDG00000008502	zgc:162730	99	38.200	ENSLACG00000015732	sb:cb81	97	36.675	Latimeria_chalumnae
ENSSLDG00000008502	zgc:162730	99	41.205	ENSLOCG00000014587	sb:cb81	97	41.119	Lepisosteus_oculatus
ENSSLDG00000008502	zgc:162730	100	49.010	ENSLOCG00000014597	zgc:162730	72	56.401	Lepisosteus_oculatus
ENSSLDG00000008502	zgc:162730	66	40.217	ENSMAMG00000020144	sb:cb81	55	41.577	Mastacembelus_armatus
ENSSLDG00000008502	zgc:162730	100	81.944	ENSMAMG00000007516	zgc:162730	99	82.639	Mastacembelus_armatus
ENSSLDG00000008502	zgc:162730	65	34.965	ENSMZEG00005014410	zgc:114130	63	34.694	Maylandia_zebra
ENSSLDG00000008502	zgc:162730	99	34.562	ENSMZEG00005024684	sb:cb81	62	41.901	Maylandia_zebra
ENSSLDG00000008502	zgc:162730	99	35.047	ENSMZEG00005016001	-	62	41.901	Maylandia_zebra
ENSSLDG00000008502	zgc:162730	100	74.169	ENSMZEG00005014415	zgc:162730	97	78.667	Maylandia_zebra
ENSSLDG00000008502	zgc:162730	59	86.580	ENSMMOG00000011506	zgc:162730	99	86.147	Mola_mola
ENSSLDG00000008502	zgc:162730	66	40.075	ENSMMOG00000010073	sb:cb81	74	41.924	Mola_mola
ENSSLDG00000008502	zgc:162730	77	36.810	ENSMMOG00000011504	zgc:114130	72	39.630	Mola_mola
ENSSLDG00000008502	zgc:162730	66	66.667	ENSMALG00000021140	-	96	71.795	Monopterus_albus
ENSSLDG00000008502	zgc:162730	100	78.060	ENSMALG00000002348	zgc:162730	100	79.446	Monopterus_albus
ENSSLDG00000008502	zgc:162730	100	76.620	ENSNBRG00000013701	zgc:162730	100	72.893	Neolamprologus_brichardi
ENSSLDG00000008502	zgc:162730	99	35.854	ENSNBRG00000006231	sb:cb81	97	37.530	Neolamprologus_brichardi
ENSSLDG00000008502	zgc:162730	66	39.711	ENSMEUG00000003070	ZFP36L1	67	39.711	Notamacropus_eugenii
ENSSLDG00000008502	zgc:162730	81	74.766	ENSONIG00000005003	zgc:162730	99	73.684	Oreochromis_niloticus
ENSSLDG00000008502	zgc:162730	99	35.440	ENSONIG00000001259	sb:cb81	97	35.255	Oreochromis_niloticus
ENSSLDG00000008502	zgc:162730	99	36.855	ENSORLG00000024026	sb:cb81	56	42.754	Oryzias_latipes
ENSSLDG00000008502	zgc:162730	99	61.111	ENSORLG00000027149	zgc:162730	100	62.963	Oryzias_latipes
ENSSLDG00000008502	zgc:162730	99	37.562	ENSORLG00020021084	sb:cb81	66	42.475	Oryzias_latipes_hni
ENSSLDG00000008502	zgc:162730	99	61.343	ENSORLG00020020289	zgc:162730	100	63.194	Oryzias_latipes_hni
ENSSLDG00000008502	zgc:162730	99	61.894	ENSORLG00015001519	zgc:162730	100	63.510	Oryzias_latipes_hsok
ENSSLDG00000008502	zgc:162730	99	37.500	ENSORLG00015010105	sb:cb81	65	44.000	Oryzias_latipes_hsok
ENSSLDG00000008502	zgc:162730	99	36.139	ENSOMEG00000020565	sb:cb81	66	42.500	Oryzias_melastigma
ENSSLDG00000008502	zgc:162730	99	65.116	ENSOMEG00000017752	zgc:162730	100	66.047	Oryzias_melastigma
ENSSLDG00000008502	zgc:162730	66	42.697	ENSPMGG00000000442	zfp36l1a	68	42.537	Periophthalmus_magnuspinnatus
ENSSLDG00000008502	zgc:162730	66	39.711	ENSPCIG00000019895	ZFP36L1	59	39.711	Phascolarctos_cinereus
ENSSLDG00000008502	zgc:162730	99	35.891	ENSPFOG00000013806	sb:cb81	78	40.719	Poecilia_formosa
ENSSLDG00000008502	zgc:162730	100	74.306	ENSPFOG00000003665	zgc:162730	100	74.925	Poecilia_formosa
ENSSLDG00000008502	zgc:162730	100	74.306	ENSPLAG00000000946	zgc:162730	100	73.611	Poecilia_latipinna
ENSSLDG00000008502	zgc:162730	81	38.769	ENSPLAG00000020158	sb:cb81	86	40.841	Poecilia_latipinna
ENSSLDG00000008502	zgc:162730	99	35.891	ENSPMEG00000022425	sb:cb81	78	40.719	Poecilia_mexicana
ENSSLDG00000008502	zgc:162730	100	74.769	ENSPMEG00000000341	zgc:162730	100	74.074	Poecilia_mexicana
ENSSLDG00000008502	zgc:162730	99	34.928	ENSPREG00000017495	sb:cb81	79	39.244	Poecilia_reticulata
ENSSLDG00000008502	zgc:162730	100	74.306	ENSPREG00000021263	zgc:162730	100	73.611	Poecilia_reticulata
ENSSLDG00000008502	zgc:162730	100	76.620	ENSPNYG00000015553	zgc:162730	100	72.893	Pundamilia_nyererei
ENSSLDG00000008502	zgc:162730	99	37.198	ENSPNYG00000007502	sb:cb81	97	36.930	Pundamilia_nyererei
ENSSLDG00000008502	zgc:162730	66	42.164	ENSPNAG00000000386	zfp36l1b	65	40.977	Pygocentrus_nattereri
ENSSLDG00000008502	zgc:162730	99	36.585	ENSPNAG00000030063	sb:cb81	97	35.222	Pygocentrus_nattereri
ENSSLDG00000008502	zgc:162730	100	50.643	ENSPNAG00000023018	zgc:162730	100	49.105	Pygocentrus_nattereri
ENSSLDG00000008502	zgc:162730	99	33.967	ENSSFOG00015003179	sb:cb81	97	32.683	Scleropages_formosus
ENSSLDG00000008502	zgc:162730	100	84.028	ENSSMAG00000018612	zgc:162730	100	84.028	Scophthalmus_maximus
ENSSLDG00000008502	zgc:162730	57	34.426	ENSSMAG00000004403	sb:cb81	94	36.032	Scophthalmus_maximus
ENSSLDG00000008502	zgc:162730	98	33.871	ENSSDUG00000002237	zgc:114130	66	36.713	Seriola_dumerili
ENSSLDG00000008502	zgc:162730	84	36.815	ENSSDUG00000004426	sb:cb81	97	35.230	Seriola_dumerili
ENSSLDG00000008502	zgc:162730	100	99.537	ENSSDUG00000002247	zgc:162730	100	99.537	Seriola_dumerili
ENSSLDG00000008502	zgc:162730	66	38.828	ENSSPUG00000002037	ZFP36L1	68	39.051	Sphenodon_punctatus
ENSSLDG00000008502	zgc:162730	99	35.680	ENSSPAG00000013546	sb:cb81	65	43.321	Stegastes_partitus
ENSSLDG00000008502	zgc:162730	100	85.185	ENSSPAG00000006851	zgc:162730	100	85.185	Stegastes_partitus
ENSSLDG00000008502	zgc:162730	100	75.926	ENSTRUG00000021229	zgc:162730	100	75.694	Takifugu_rubripes
ENSSLDG00000008502	zgc:162730	72	36.646	ENSTRUG00000022473	zgc:114130	57	36.694	Takifugu_rubripes
ENSSLDG00000008502	zgc:162730	99	35.452	ENSTRUG00000020720	sb:cb81	81	36.657	Takifugu_rubripes
ENSSLDG00000008502	zgc:162730	79	36.923	ENSTNIG00000019802	sb:cb81	94	39.264	Tetraodon_nigroviridis
ENSSLDG00000008502	zgc:162730	96	69.471	ENSTNIG00000000183	zgc:162730	100	70.051	Tetraodon_nigroviridis
ENSSLDG00000008502	zgc:162730	66	42.336	ENSXETG00000016987	zfp36l1	68	39.927	Xenopus_tropicalis
ENSSLDG00000008502	zgc:162730	100	72.917	ENSXCOG00000012791	zgc:162730	100	72.222	Xiphophorus_couchianus
ENSSLDG00000008502	zgc:162730	62	35.887	ENSXCOG00000010688	sb:cb81	86	38.672	Xiphophorus_couchianus
ENSSLDG00000008502	zgc:162730	99	37.250	ENSXMAG00000004681	sb:cb81	79	42.012	Xiphophorus_maculatus
ENSSLDG00000008502	zgc:162730	100	73.380	ENSXMAG00000018206	zgc:162730	100	72.685	Xiphophorus_maculatus