EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000008504 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: ADP-ribosylation factor 1-like
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 10853 bases
Position: chrPEQF01098998.1:257999-268851
Accession: 111660541
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000010676	MMR_HSR1	PF01926.23	4.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000011068	-	4688	XM_023413881	ENSSLDP00000010676	180 (aa)	XP_023269649	UPI000BBE0CCE

Gene Model

Click here to download ENSSLDG00000008504's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000008504's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000008504	-	98	47.159	ENSSLDG00000000728	arl5c	98	47.159
ENSSLDG00000008504	-	92	32.530	ENSSLDG00000011226	arl8a	89	32.530
ENSSLDG00000008504	-	96	47.753	ENSSLDG00000017889	arl4cb	91	47.753
ENSSLDG00000008504	-	84	47.368	ENSSLDG00000009763	arl11	88	47.368
ENSSLDG00000008504	-	94	32.044	ENSSLDG00000024197	-	91	32.044
ENSSLDG00000008504	-	98	49.718	ENSSLDG00000012215	arl5a	99	49.718
ENSSLDG00000008504	-	79	35.417	ENSSLDG00000001636	-	55	35.417
ENSSLDG00000008504	-	96	31.609	ENSSLDG00000009588	arl8bb	94	31.609
ENSSLDG00000008504	-	63	30.081	ENSSLDG00000011757	-	59	30.081
ENSSLDG00000008504	-	91	44.785	ENSSLDG00000009955	-	88	45.625
ENSSLDG00000008504	-	97	50.286	ENSSLDG00000021379	ARL5B	98	50.286
ENSSLDG00000008504	-	91	45.029	ENSSLDG00000012798	-	92	45.029
ENSSLDG00000008504	-	63	30.081	ENSSLDG00000018942	rab1ab	58	30.081
ENSSLDG00000008504	-	54	37.113	ENSSLDG00000025558	sar1ab	69	37.113
ENSSLDG00000008504	-	96	45.652	ENSSLDG00000008208	-	91	45.652
ENSSLDG00000008504	-	100	92.265	ENSSLDG00000025143	arf3b	100	92.265
ENSSLDG00000008504	-	88	43.902	ENSSLDG00000005628	arl4d	82	43.902
ENSSLDG00000008504	-	90	45.238	ENSSLDG00000015190	arl4aa	86	45.238
ENSSLDG00000008504	-	51	35.870	ENSSLDG00000017052	sar1b	79	35.870
ENSSLDG00000008504	-	100	93.923	ENSSLDG00000021639	arf2b	100	93.923
ENSSLDG00000008504	-	97	82.759	ENSSLDG00000017188	arf5	97	82.759
ENSSLDG00000008504	-	94	35.165	ENSSLDG00000020044	arfrp1	89	35.165
ENSSLDG00000008504	-	96	47.977	ENSSLDG00000000124	arl2	93	47.977
ENSSLDG00000008504	-	87	51.572	ENSSLDG00000006512	-	77	51.572
ENSSLDG00000008504	-	98	59.322	ENSSLDG00000012946	arl1	98	59.322
ENSSLDG00000008504	-	96	67.630	ENSSLDG00000020097	-	96	67.630
ENSSLDG00000008504	-	88	40.556	ENSSLDG00000023797	ARL6	90	40.556
ENSSLDG00000008504	-	97	41.209	ENSSLDG00000000746	ARL6	98	41.209
ENSSLDG00000008504	-	88	30.409	ENSSLDG00000020560	srprb	62	30.409
ENSSLDG00000008504	-	96	46.369	ENSSLDG00000012103	-	88	46.369
ENSSLDG00000008504	-	96	46.821	ENSSLDG00000017576	arl3	98	46.821
ENSSLDG00000008504	-	100	43.407	ENSSLDG00000003967	arl3l2	94	43.407
ENSSLDG00000008504	-	99	90.503	ENSSLDG00000013951	-	99	90.503
ENSSLDG00000008504	-	61	87.156	ENSSLDG00000005491	-	96	87.156
ENSSLDG00000008504	-	100	92.265	ENSSLDG00000005289	-	100	92.265

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000008504	-	100	96.667	ENSACIG00000012192	-	100	96.667	Amphilophus_citrinellus
ENSSLDG00000008504	-	84	98.013	ENSAOCG00000001275	-	88	98.013	Amphiprion_ocellaris
ENSSLDG00000008504	-	100	98.333	ENSAPEG00000016909	-	100	98.333	Amphiprion_percula
ENSSLDG00000008504	-	100	98.333	ENSATEG00000003174	-	100	98.333	Anabas_testudineus
ENSSLDG00000008504	-	100	95.000	ENSACLG00000004123	-	100	95.000	Astatotilapia_calliptera
ENSSLDG00000008504	-	100	93.370	ENSAMXG00000019845	arf1	100	93.370	Astyanax_mexicanus
ENSSLDG00000008504	-	100	97.222	ENSCVAG00000013374	-	100	97.222	Cyprinodon_variegatus
ENSSLDG00000008504	-	100	93.370	ENSDARG00000009484	arf1	100	93.370	Danio_rerio
ENSSLDG00000008504	-	100	93.370	ENSELUG00000022533	arf1	79	93.370	Esox_lucius
ENSSLDG00000008504	-	100	96.667	ENSFHEG00000005859	-	100	96.667	Fundulus_heteroclitus
ENSSLDG00000008504	-	96	87.283	ENSGMOG00000000429	arf1	95	87.283	Gadus_morhua
ENSSLDG00000008504	-	100	97.222	ENSGAFG00000018151	-	100	97.222	Gambusia_affinis
ENSSLDG00000008504	-	100	86.667	ENSGACG00000014195	-	97	86.667	Gasterosteus_aculeatus
ENSSLDG00000008504	-	100	95.000	ENSHBUG00000002636	-	100	95.000	Haplochromis_burtoni
ENSSLDG00000008504	-	100	92.818	ENSIPUG00000006311	arf1	100	92.818	Ictalurus_punctatus
ENSSLDG00000008504	-	100	95.000	ENSKMAG00000018315	-	100	95.000	Kryptolebias_marmoratus
ENSSLDG00000008504	-	99	88.202	ENSLBEG00000023263	-	98	88.202	Labrus_bergylta
ENSSLDG00000008504	-	99	89.385	ENSLBEG00000001998	arf1	99	89.385	Labrus_bergylta
ENSSLDG00000008504	-	100	97.778	ENSMAMG00000001553	-	100	97.778	Mastacembelus_armatus
ENSSLDG00000008504	-	100	95.000	ENSMZEG00005022594	-	100	95.000	Maylandia_zebra
ENSSLDG00000008504	-	100	98.333	ENSMALG00000004269	-	100	98.333	Monopterus_albus
ENSSLDG00000008504	-	100	95.000	ENSNBRG00000016455	-	100	95.000	Neolamprologus_brichardi
ENSSLDG00000008504	-	100	95.000	ENSONIG00000001286	-	100	95.000	Oreochromis_niloticus
ENSSLDG00000008504	-	100	97.222	ENSORLG00000023270	-	100	97.222	Oryzias_latipes
ENSSLDG00000008504	-	100	96.667	ENSORLG00020006712	-	100	96.667	Oryzias_latipes_hni
ENSSLDG00000008504	-	100	97.222	ENSORLG00015019836	-	100	97.222	Oryzias_latipes_hsok
ENSSLDG00000008504	-	100	97.222	ENSOMEG00000023784	-	100	97.222	Oryzias_melastigma
ENSSLDG00000008504	-	100	87.778	ENSPMGG00000014174	arf1	98	91.176	Periophthalmus_magnuspinnatus
ENSSLDG00000008504	-	100	92.778	ENSPMAG00000002035	arf1	100	92.778	Petromyzon_marinus
ENSSLDG00000008504	-	100	97.222	ENSPFOG00000014787	-	100	97.222	Poecilia_formosa
ENSSLDG00000008504	-	100	97.222	ENSPLAG00000001041	-	100	97.222	Poecilia_latipinna
ENSSLDG00000008504	-	100	97.222	ENSPMEG00000024077	-	100	97.222	Poecilia_mexicana
ENSSLDG00000008504	-	100	97.222	ENSPREG00000009009	-	100	97.222	Poecilia_reticulata
ENSSLDG00000008504	-	100	95.000	ENSPNYG00000009472	-	100	95.000	Pundamilia_nyererei
ENSSLDG00000008504	-	94	95.266	ENSPNAG00000000098	arf1	93	95.266	Pygocentrus_nattereri
ENSSLDG00000008504	-	99	77.222	YDL192W	-	99	77.222	Saccharomyces_cerevisiae
ENSSLDG00000008504	-	99	77.095	YDL137W	-	99	77.095	Saccharomyces_cerevisiae
ENSSLDG00000008504	-	100	91.111	ENSSMAG00000006125	-	100	91.111	Scophthalmus_maximus
ENSSLDG00000008504	-	100	100.000	ENSSDUG00000017356	-	100	100.000	Seriola_dumerili
ENSSLDG00000008504	-	100	98.889	ENSSPAG00000011431	-	100	98.889	Stegastes_partitus
ENSSLDG00000008504	-	100	95.000	ENSTRUG00000019870	-	100	95.000	Takifugu_rubripes
ENSSLDG00000008504	-	100	95.556	ENSTNIG00000011685	-	100	95.556	Tetraodon_nigroviridis
ENSSLDG00000008504	-	100	97.222	ENSXCOG00000016687	-	98	97.222	Xiphophorus_couchianus
ENSSLDG00000008504	-	100	97.222	ENSXMAG00000009193	-	100	97.222	Xiphophorus_maculatus