EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSLDG00000008629 (Gene tree)
Gene ID: -
Gene Symbol: si:ch211-153b23.3
Alias: -
Full Name: uncharacterized LOC111658567
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 3636 bases
Position: chrPEQF01098933.1:12232-15867
Accession: 111658567
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000010852	Sua5_yciO_yrdC	PF01300.18	1.6e-33	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000011248	-	2637	XM_023411150	ENSSLDP00000010852	879 (aa)	XP_023266918	-

Gene Model

Click here to download ENSSLDG00000008629's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000008629's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000008629	si:ch211-153b23.3	100	66.140	ENSACIG00000006968	si:ch211-153b23.3	100	66.140	Amphilophus_citrinellus
ENSSLDG00000008629	si:ch211-153b23.3	100	84.371	ENSAOCG00000010974	si:ch211-153b23.3	100	84.371	Amphiprion_ocellaris
ENSSLDG00000008629	si:ch211-153b23.3	57	31.250	ENSAPEG00000014665	si:ch211-153b23.4	59	31.250	Amphiprion_percula
ENSSLDG00000008629	si:ch211-153b23.3	100	84.485	ENSAPEG00000014700	si:ch211-153b23.3	100	84.485	Amphiprion_percula
ENSSLDG00000008629	si:ch211-153b23.3	100	84.258	ENSATEG00000004956	si:ch211-153b23.3	99	84.258	Anabas_testudineus
ENSSLDG00000008629	si:ch211-153b23.3	100	80.861	ENSACLG00000005894	si:ch211-153b23.3	100	80.861	Astatotilapia_calliptera
ENSSLDG00000008629	si:ch211-153b23.3	56	34.087	ENSACLG00000005471	si:ch211-153b23.4	59	34.087	Astatotilapia_calliptera
ENSSLDG00000008629	si:ch211-153b23.3	100	72.676	ENSAMXG00000038564	si:ch211-153b23.3	99	72.676	Astyanax_mexicanus
ENSSLDG00000008629	si:ch211-153b23.3	99	79.228	ENSCSEG00000014853	si:ch211-153b23.3	100	79.228	Cynoglossus_semilaevis
ENSSLDG00000008629	si:ch211-153b23.3	52	35.294	ENSCVAG00000021145	si:ch211-153b23.4	54	35.294	Cyprinodon_variegatus
ENSSLDG00000008629	si:ch211-153b23.3	100	83.126	ENSCVAG00000021124	si:ch211-153b23.3	100	83.126	Cyprinodon_variegatus
ENSSLDG00000008629	si:ch211-153b23.3	100	72.054	ENSDARG00000104919	si:ch211-153b23.3	99	72.054	Danio_rerio
ENSSLDG00000008629	si:ch211-153b23.3	81	86.239	ENSELUG00000004912	si:ch211-153b23.3	99	86.239	Esox_lucius
ENSSLDG00000008629	si:ch211-153b23.3	100	84.371	ENSFHEG00000010030	si:ch211-153b23.3	99	84.371	Fundulus_heteroclitus
ENSSLDG00000008629	si:ch211-153b23.3	100	83.239	ENSGAFG00000007455	si:ch211-153b23.3	99	83.239	Gambusia_affinis
ENSSLDG00000008629	si:ch211-153b23.3	100	81.087	ENSHBUG00000001760	si:ch211-153b23.3	100	81.087	Haplochromis_burtoni
ENSSLDG00000008629	si:ch211-153b23.3	53	33.661	ENSHBUG00000000013	si:ch211-153b23.4	65	33.661	Haplochromis_burtoni
ENSSLDG00000008629	si:ch211-153b23.3	53	35.084	ENSIPUG00000015205	si:ch211-153b23.4	56	35.084	Ictalurus_punctatus
ENSSLDG00000008629	si:ch211-153b23.3	100	72.367	ENSIPUG00000015213	si:ch211-153b23.3	99	72.480	Ictalurus_punctatus
ENSSLDG00000008629	si:ch211-153b23.3	58	31.767	ENSKMAG00000006919	-	58	31.767	Kryptolebias_marmoratus
ENSSLDG00000008629	si:ch211-153b23.3	57	31.887	ENSKMAG00000006829	si:ch211-153b23.4	62	31.887	Kryptolebias_marmoratus
ENSSLDG00000008629	si:ch211-153b23.3	99	83.163	ENSKMAG00000006792	si:ch211-153b23.3	99	83.163	Kryptolebias_marmoratus
ENSSLDG00000008629	si:ch211-153b23.3	100	82.786	ENSLBEG00000026324	si:ch211-153b23.3	99	82.786	Labrus_bergylta
ENSSLDG00000008629	si:ch211-153b23.3	51	36.681	ENSLACG00000017592	si:ch211-153b23.4	53	36.681	Latimeria_chalumnae
ENSSLDG00000008629	si:ch211-153b23.3	94	57.565	ENSLACG00000005800	-	99	57.920	Latimeria_chalumnae
ENSSLDG00000008629	si:ch211-153b23.3	84	56.250	ENSLOCG00000015063	si:ch211-153b23.3	98	56.250	Lepisosteus_oculatus
ENSSLDG00000008629	si:ch211-153b23.3	100	83.465	ENSMAMG00000009328	si:ch211-153b23.3	100	83.465	Mastacembelus_armatus
ENSSLDG00000008629	si:ch211-153b23.3	56	33.898	ENSMZEG00005011433	si:ch211-153b23.4	63	33.898	Maylandia_zebra
ENSSLDG00000008629	si:ch211-153b23.3	100	81.087	ENSMZEG00005011450	si:ch211-153b23.3	100	81.087	Maylandia_zebra
ENSSLDG00000008629	si:ch211-153b23.3	100	83.258	ENSMMOG00000004436	si:ch211-153b23.3	99	83.258	Mola_mola
ENSSLDG00000008629	si:ch211-153b23.3	56	32.830	ENSMMOG00000004425	si:ch211-153b23.4	64	32.830	Mola_mola
ENSSLDG00000008629	si:ch211-153b23.3	56	33.522	ENSNBRG00000013392	si:ch211-153b23.4	65	33.522	Neolamprologus_brichardi
ENSSLDG00000008629	si:ch211-153b23.3	100	81.540	ENSNBRG00000013370	si:ch211-153b23.3	100	81.540	Neolamprologus_brichardi
ENSSLDG00000008629	si:ch211-153b23.3	56	34.078	ENSONIG00000017875	si:ch211-153b23.4	59	33.898	Oreochromis_niloticus
ENSSLDG00000008629	si:ch211-153b23.3	100	79.619	ENSORLG00000006161	si:ch211-153b23.3	99	79.619	Oryzias_latipes
ENSSLDG00000008629	si:ch211-153b23.3	58	32.264	ENSORLG00000006169	si:ch211-153b23.4	58	32.325	Oryzias_latipes
ENSSLDG00000008629	si:ch211-153b23.3	58	32.325	ENSORLG00020009905	si:ch211-153b23.4	58	32.325	Oryzias_latipes_hni
ENSSLDG00000008629	si:ch211-153b23.3	97	80.442	ENSORLG00020000910	si:ch211-153b23.3	100	80.442	Oryzias_latipes_hni
ENSSLDG00000008629	si:ch211-153b23.3	97	79.791	ENSORLG00015003698	si:ch211-153b23.3	100	79.791	Oryzias_latipes_hsok
ENSSLDG00000008629	si:ch211-153b23.3	58	32.514	ENSORLG00015003709	si:ch211-153b23.4	58	32.514	Oryzias_latipes_hsok
ENSSLDG00000008629	si:ch211-153b23.3	100	79.955	ENSOMEG00000007661	si:ch211-153b23.3	99	79.955	Oryzias_melastigma
ENSSLDG00000008629	si:ch211-153b23.3	58	31.887	ENSOMEG00000007682	si:ch211-153b23.4	58	31.887	Oryzias_melastigma
ENSSLDG00000008629	si:ch211-153b23.3	56	33.208	ENSPKIG00000014429	si:ch211-153b23.4	62	33.208	Paramormyrops_kingsleyae
ENSSLDG00000008629	si:ch211-153b23.3	99	50.717	ENSPKIG00000021029	-	99	50.717	Paramormyrops_kingsleyae
ENSSLDG00000008629	si:ch211-153b23.3	97	72.254	ENSPKIG00000022450	si:ch211-153b23.3	100	72.254	Paramormyrops_kingsleyae
ENSSLDG00000008629	si:ch211-153b23.3	57	32.948	ENSPKIG00000025681	si:ch211-153b23.4	59	32.948	Paramormyrops_kingsleyae
ENSSLDG00000008629	si:ch211-153b23.3	83	77.116	ENSPMGG00000001311	si:ch211-153b23.3	100	77.116	Periophthalmus_magnuspinnatus
ENSSLDG00000008629	si:ch211-153b23.3	52	34.783	ENSPFOG00000012164	si:ch211-153b23.4	62	34.783	Poecilia_formosa
ENSSLDG00000008629	si:ch211-153b23.3	100	83.034	ENSPFOG00000012289	si:ch211-153b23.3	99	83.034	Poecilia_formosa
ENSSLDG00000008629	si:ch211-153b23.3	99	84.014	ENSPLAG00000016320	si:ch211-153b23.3	100	84.014	Poecilia_latipinna
ENSSLDG00000008629	si:ch211-153b23.3	100	83.918	ENSPMEG00000008884	si:ch211-153b23.3	99	83.918	Poecilia_mexicana
ENSSLDG00000008629	si:ch211-153b23.3	51	34.292	ENSPMEG00000007538	si:ch211-153b23.4	54	34.292	Poecilia_mexicana
ENSSLDG00000008629	si:ch211-153b23.3	56	33.898	ENSPNYG00000000250	si:ch211-153b23.4	63	33.898	Pundamilia_nyererei
ENSSLDG00000008629	si:ch211-153b23.3	100	80.861	ENSPNYG00000000251	si:ch211-153b23.3	100	80.861	Pundamilia_nyererei
ENSSLDG00000008629	si:ch211-153b23.3	100	74.972	ENSPNAG00000019592	si:ch211-153b23.3	99	74.972	Pygocentrus_nattereri
ENSSLDG00000008629	si:ch211-153b23.3	100	72.991	ENSSFOG00015010910	si:ch211-153b23.3	99	72.991	Scleropages_formosus
ENSSLDG00000008629	si:ch211-153b23.3	68	50.883	ENSSFOG00015009030	-	96	50.883	Scleropages_formosus
ENSSLDG00000008629	si:ch211-153b23.3	99	86.758	ENSSMAG00000005446	si:ch211-153b23.3	100	86.758	Scophthalmus_maximus
ENSSLDG00000008629	si:ch211-153b23.3	51	33.987	ENSTRUG00000003247	si:ch211-153b23.4	54	33.987	Takifugu_rubripes
ENSSLDG00000008629	si:ch211-153b23.3	99	78.107	ENSTRUG00000020530	si:ch211-153b23.3	100	78.107	Takifugu_rubripes
ENSSLDG00000008629	si:ch211-153b23.3	93	84.586	ENSTNIG00000008962	si:ch211-153b23.3	99	84.586	Tetraodon_nigroviridis
ENSSLDG00000008629	si:ch211-153b23.3	100	83.145	ENSXMAG00000029318	si:ch211-153b23.3	99	83.145	Xiphophorus_maculatus