EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Orthologs
Description
Ensembl ID
ENSSLDG00000008819 (Gene tree)
Gene ID
-
Gene Symbol
csde1
Alias
fa92c07|si:ch211-261n11.2|wu:fa92c07|wu:fa97c10|wu:fb53f07|wu:fb78d03
Full Name
cold shock domain containing E1
Gene Type
protein_coding
Species
Seriola_lalandi_dorsalis
Status
putative
Strand
Plus strand
Length
11551 bases
Position
chrPEQF01098053.1:177717-189267
Accession
111651308
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSSLDP00000011255CSDPF00313.223.8e-8215
ENSSLDP00000011255CSDPF00313.223.8e-8225
ENSSLDP00000011255CSDPF00313.223.8e-8235
ENSSLDP00000011255CSDPF00313.223.8e-8245
ENSSLDP00000011255CSDPF00313.223.8e-8255
ENSSLDP00000011203CSDPF00313.224.3e-8215
ENSSLDP00000011203CSDPF00313.224.3e-8225
ENSSLDP00000011203CSDPF00313.224.3e-8235
ENSSLDP00000011203CSDPF00313.224.3e-8245
ENSSLDP00000011203CSDPF00313.224.3e-8255
ENSSLDP00000011235CSDPF00313.227.5e-8215
ENSSLDP00000011235CSDPF00313.227.5e-8225
ENSSLDP00000011235CSDPF00313.227.5e-8235
ENSSLDP00000011235CSDPF00313.227.5e-8245
ENSSLDP00000011235CSDPF00313.227.5e-8255
ENSSLDP00000011164CSDPF00313.228.7e-8215
ENSSLDP00000011164CSDPF00313.228.7e-8225
ENSSLDP00000011164CSDPF00313.228.7e-8235
ENSSLDP00000011164CSDPF00313.228.7e-8245
ENSSLDP00000011164CSDPF00313.228.7e-8255
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSSLDT00000011643-2651XM_023401290ENSSLDP00000011235839 (aa)XP_023257058-
ENSSLDT00000011570-2825XM_023401285ENSSLDP00000011164850 (aa)XP_023257053UPI000BBED8AD
ENSSLDT00000011609-2636XM_023401294ENSSLDP00000011203797 (aa)XP_023257062-
ENSSLDT00000011664-2307-ENSSLDP00000011255768 (aa)--
Gene Model
Click here to download ENSSLDG00000008819's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000008819's network
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSSLDG00000008819csde110077.662ENSG00000009307CSDE110084.559Homo_sapiens
ENSSLDG00000008819csde110096.875ENSAPOG00000015538csde110096.875Acanthochromis_polyacanthus
ENSSLDG00000008819csde110076.883ENSAMEG00000017129CSDE19476.883Ailuropoda_melanoleuca
ENSSLDG00000008819csde19194.324ENSACIG00000015175csde110094.324Amphilophus_citrinellus
ENSSLDG00000008819csde110096.875ENSAOCG00000011510csde110096.875Amphiprion_ocellaris
ENSSLDG00000008819csde110097.005ENSAPEG00000007194csde110097.005Amphiprion_percula
ENSSLDG00000008819csde110095.059ENSATEG00000003864csde110095.059Anabas_testudineus
ENSSLDG00000008819csde110079.844ENSAPLG00000008797CSDE110079.844Anas_platyrhynchos
ENSSLDG00000008819csde110079.750ENSACAG00000003120CSDE110079.750Anolis_carolinensis
ENSSLDG00000008819csde19361.837ENSANAG00000028396-9162.925Aotus_nancymaae
ENSSLDG00000008819csde110077.532ENSANAG00000024665CSDE19876.024Aotus_nancymaae
ENSSLDG00000008819csde110094.408ENSACLG00000013296csde110094.408Astatotilapia_calliptera
ENSSLDG00000008819csde110087.030ENSAMXG00000007436csde110087.030Astyanax_mexicanus
ENSSLDG00000008819csde110077.403ENSBTAG00000000678CSDE110077.403Bos_taurus
ENSSLDG00000008819csde110077.532ENSCJAG00000012565CSDE19876.145Callithrix_jacchus
ENSSLDG00000008819csde19878.117ENSCAFG00000009618CSDE19478.117Canis_familiaris
ENSSLDG00000008819csde110077.922ENSCAFG00020000481CSDE110077.922Canis_lupus_dingo
ENSSLDG00000008819csde110077.403ENSCHIG00000017250CSDE110077.403Capra_hircus
ENSSLDG00000008819csde110077.662ENSTSYG00000003747CSDE110077.662Carlito_syrichta
ENSSLDG00000008819csde110076.074ENSCAPG00000015128CSDE110076.074Cavia_aperea
ENSSLDG00000008819csde110073.217ENSCPOG00000040388CSDE110073.217Cavia_porcellus
ENSSLDG00000008819csde19557.109ENSCCAG00000033677-9957.109Cebus_capucinus
ENSSLDG00000008819csde19755.011ENSCCAG00000030878-9155.011Cebus_capucinus
ENSSLDG00000008819csde110077.532ENSCCAG00000036794CSDE110077.154Cebus_capucinus
ENSSLDG00000008819csde110077.662ENSCATG00000036962CSDE19777.662Cercocebus_atys
ENSSLDG00000008819csde110077.792ENSCLAG00000006618CSDE110077.792Chinchilla_lanigera
ENSSLDG00000008819csde110077.278ENSCSAG00000001658CSDE19876.265Chlorocebus_sabaeus
ENSSLDG00000008819csde110082.524ENSCHOG00000000918CSDE18980.793Choloepus_hoffmanni
ENSSLDG00000008819csde110079.844ENSCPBG00000016547CSDE110079.844Chrysemys_picta_bellii
ENSSLDG00000008819csde19844.049ENSCING00000014465-9843.093Ciona_intestinalis
ENSSLDG00000008819csde19743.015ENSCSAVG00000008100-10042.092Ciona_savignyi
ENSSLDG00000008819csde19079.775ENSCANG00000031069-9479.336Colobus_angolensis_palliatus
ENSSLDG00000008819csde110077.662ENSCANG00000035096CSDE19777.662Colobus_angolensis_palliatus
ENSSLDG00000008819csde110077.143ENSCGRG00001016833-10077.143Cricetulus_griseus_chok1gshd
ENSSLDG00000008819csde110063.247ENSCGRG00001014011-10063.247Cricetulus_griseus_chok1gshd
ENSSLDG00000008819csde110073.478ENSCGRG00000005831-10073.478Cricetulus_griseus_crigri
ENSSLDG00000008819csde19773.778ENSCGRG00000002225-10073.778Cricetulus_griseus_crigri
ENSSLDG00000008819csde110093.108ENSCSEG00000002620csde110093.108Cynoglossus_semilaevis
ENSSLDG00000008819csde110092.328ENSCVAG00000001344csde110092.328Cyprinodon_variegatus
ENSSLDG00000008819csde110087.860ENSDARG00000074758csde110087.860Danio_rerio
ENSSLDG00000008819csde110077.951ENSDNOG00000010287-9377.951Dasypus_novemcinctus
ENSSLDG00000008819csde15957.627ENSDNOG00000034464-9963.810Dasypus_novemcinctus
ENSSLDG00000008819csde110076.904ENSDORG00000011609Csde110076.904Dipodomys_ordii
ENSSLDG00000008819csde19849.590FBgn0263352Unr8649.184Drosophila_melanogaster
ENSSLDG00000008819csde18981.301ENSETEG00000002491-8672.334Echinops_telfairi
ENSSLDG00000008819csde19960.417ENSETEG00000013678-9960.417Echinops_telfairi
ENSSLDG00000008819csde19068.976ENSETEG00000006280-10068.976Echinops_telfairi
ENSSLDG00000008819csde17953.960ENSETEG00000007109-9953.960Echinops_telfairi
ENSSLDG00000008819csde19956.404ENSEBUG00000008647csde19954.654Eptatretus_burgeri
ENSSLDG00000008819csde110078.182ENSEASG00005006284CSDE110077.778Equus_asinus_asinus
ENSSLDG00000008819csde110078.182ENSECAG00000020885CSDE110077.778Equus_caballus
ENSSLDG00000008819csde19381.308ENSEEUG00000006286CSDE16881.308Erinaceus_europaeus
ENSSLDG00000008819csde110088.486ENSELUG00000015507csde110088.486Esox_lucius
ENSSLDG00000008819csde110077.922ENSFCAG00000029266CSDE110077.922Felis_catus
ENSSLDG00000008819csde110078.875ENSFALG00000003407CSDE110078.875Ficedula_albicollis
ENSSLDG00000008819csde110076.904ENSFDAG00000007882CSDE110076.904Fukomys_damarensis
ENSSLDG00000008819csde110092.356ENSFHEG00000010799csde110092.356Fundulus_heteroclitus
ENSSLDG00000008819csde19990.351ENSGMOG00000012731csde110090.351Gadus_morhua
ENSSLDG00000008819csde19879.363ENSGALG00000002139CSDE19879.363Gallus_gallus
ENSSLDG00000008819csde19492.824ENSGAFG00000005241csde19592.824Gambusia_affinis
ENSSLDG00000008819csde19995.107ENSGACG00000004544csde110095.107Gasterosteus_aculeatus
ENSSLDG00000008819csde110079.844ENSGAGG00000017685CSDE110079.375Gopherus_agassizii
ENSSLDG00000008819csde110077.662ENSGGOG00000002164CSDE110077.662Gorilla_gorilla
ENSSLDG00000008819csde110094.408ENSHBUG00000020315csde110094.408Haplochromis_burtoni
ENSSLDG00000008819csde19962.203ENSHGLG00000000650-9962.203Heterocephalus_glaber_female
ENSSLDG00000008819csde19767.916ENSHGLG00000008555-10067.809Heterocephalus_glaber_female
ENSSLDG00000008819csde110069.740ENSHGLG00000003829-10069.740Heterocephalus_glaber_female
ENSSLDG00000008819csde19666.444ENSHGLG00000010039-10066.444Heterocephalus_glaber_female
ENSSLDG00000008819csde110065.207ENSHGLG00000019549-10065.207Heterocephalus_glaber_female
ENSSLDG00000008819csde19967.628ENSHGLG00000007471-9867.628Heterocephalus_glaber_female
ENSSLDG00000008819csde110070.519ENSHGLG00000009620-10070.649Heterocephalus_glaber_female
ENSSLDG00000008819csde19761.111ENSHGLG00100004833-10061.111Heterocephalus_glaber_male
ENSSLDG00000008819csde19966.232ENSHGLG00100007287-9866.232Heterocephalus_glaber_male
ENSSLDG00000008819csde110065.455ENSHGLG00100012072-10065.455Heterocephalus_glaber_male
ENSSLDG00000008819csde110077.403ENSHGLG00100019438-10077.403Heterocephalus_glaber_male
ENSSLDG00000008819csde19965.586ENSHGLG00100002245-9965.586Heterocephalus_glaber_male
ENSSLDG00000008819csde19365.508ENSHGLG00100004195-10065.508Heterocephalus_glaber_male
ENSSLDG00000008819csde110063.636ENSHGLG00100001846-10063.636Heterocephalus_glaber_male
ENSSLDG00000008819csde19666.222ENSHGLG00100006910-10066.222Heterocephalus_glaber_male
ENSSLDG00000008819csde110092.068ENSHCOG00000004158csde110092.068Hippocampus_comes
ENSSLDG00000008819csde110085.733ENSIPUG00000000355csde110085.733Ictalurus_punctatus
ENSSLDG00000008819csde19356.830ENSSTOG00000032722-9957.372Ictidomys_tridecemlineatus
ENSSLDG00000008819csde110064.240ENSSTOG00000030994-10064.240Ictidomys_tridecemlineatus
ENSSLDG00000008819csde110076.904ENSJJAG00000019571Csde110076.904Jaculus_jaculus
ENSSLDG00000008819csde110091.397ENSKMAG00000005685csde110090.943Kryptolebias_marmoratus
ENSSLDG00000008819csde110095.189ENSLBEG00000014770csde110095.189Labrus_bergylta
ENSSLDG00000008819csde110076.326ENSLACG00000018452CSDE19973.862Latimeria_chalumnae
ENSSLDG00000008819csde110087.077ENSLOCG00000010413csde110084.272Lepisosteus_oculatus
ENSSLDG00000008819csde110077.403ENSLAFG00000007150CSDE19677.403Loxodonta_africana
ENSSLDG00000008819csde110077.662ENSMFAG00000003674CSDE110077.662Macaca_fascicularis
ENSSLDG00000008819csde110077.662ENSMMUG00000001974CSDE110077.662Macaca_mulatta
ENSSLDG00000008819csde110077.662ENSMNEG00000045247CSDE19777.662Macaca_nemestrina
ENSSLDG00000008819csde110077.403ENSMLEG00000038673CSDE19876.024Mandrillus_leucophaeus
ENSSLDG00000008819csde110096.484ENSMAMG00000008821csde110096.484Mastacembelus_armatus
ENSSLDG00000008819csde110094.408ENSMZEG00005021675csde110094.408Maylandia_zebra
ENSSLDG00000008819csde110079.740ENSMGAG00000016381CSDE110079.740Meleagris_gallopavo
ENSSLDG00000008819csde110076.779ENSMAUG00000014031Csde110076.779Mesocricetus_auratus
ENSSLDG00000008819csde110077.792ENSMICG00000002050CSDE19876.145Microcebus_murinus
ENSSLDG00000008819csde110077.143ENSMOCG00000018960Csde110077.143Microtus_ochrogaster
ENSSLDG00000008819csde110095.839ENSMMOG00000015075csde110095.839Mola_mola
ENSSLDG00000008819csde110078.652ENSMODG00000004685CSDE110078.652Monodelphis_domestica
ENSSLDG00000008819csde110095.839ENSMALG00000007132csde110095.839Monopterus_albus
ENSSLDG00000008819csde110077.273MGP_CAROLIEiJ_G0025444Csde110084.106Mus_caroli
ENSSLDG00000008819csde110077.273ENSMUSG00000068823Csde19991.176Mus_musculus
ENSSLDG00000008819csde110077.273MGP_PahariEiJ_G0026888Csde110084.106Mus_pahari
ENSSLDG00000008819csde110077.273MGP_SPRETEiJ_G0026394Csde110091.176Mus_spretus
ENSSLDG00000008819csde19877.707ENSMPUG00000005753CSDE19977.707Mustela_putorius_furo
ENSSLDG00000008819csde110077.403ENSMLUG00000005681CSDE19972.609Myotis_lucifugus
ENSSLDG00000008819csde19752.667ENSNGAG00000012599-10052.667Nannospalax_galili
ENSSLDG00000008819csde110076.654ENSNGAG00000021929Csde110076.654Nannospalax_galili
ENSSLDG00000008819csde110094.408ENSNBRG00000020808csde110094.408Neolamprologus_brichardi
ENSSLDG00000008819csde110077.662ENSNLEG00000004842CSDE19777.662Nomascus_leucogenys
ENSSLDG00000008819csde19884.466ENSMEUG00000002677CSDE19584.466Notamacropus_eugenii
ENSSLDG00000008819csde19882.524ENSOPRG00000005002CSDE17682.524Ochotona_princeps
ENSSLDG00000008819csde19752.097ENSODEG00000005979-9852.097Octodon_degus
ENSSLDG00000008819csde110076.654ENSODEG00000007383-10076.654Octodon_degus
ENSSLDG00000008819csde110091.922ENSONIG00000009309csde110091.922Oreochromis_niloticus
ENSSLDG00000008819csde110079.661ENSOANG00000003346-8379.661Ornithorhynchus_anatinus
ENSSLDG00000008819csde110077.273ENSOCUG00000016438CSDE19876.024Oryctolagus_cuniculus
ENSSLDG00000008819csde110091.667ENSORLG00000000707csde110091.667Oryzias_latipes
ENSSLDG00000008819csde110091.343ENSORLG00020005148csde110091.299Oryzias_latipes_hni
ENSSLDG00000008819csde110091.536ENSORLG00015019415csde110091.536Oryzias_latipes_hsok
ENSSLDG00000008819csde110091.667ENSOMEG00000015656csde110091.667Oryzias_melastigma
ENSSLDG00000008819csde110077.792ENSOGAG00000012127CSDE19874.034Otolemur_garnettii
ENSSLDG00000008819csde110077.403ENSOARG00000020034CSDE19873.671Ovis_aries
ENSSLDG00000008819csde110077.662ENSPPAG00000025861CSDE110077.662Pan_paniscus
ENSSLDG00000008819csde110077.922ENSPPRG00000006747CSDE19876.506Panthera_pardus
ENSSLDG00000008819csde110077.922ENSPTIG00000015468CSDE110077.528Panthera_tigris_altaica
ENSSLDG00000008819csde110077.662ENSPTRG00000033721CSDE110077.278Pan_troglodytes
ENSSLDG00000008819csde110077.662ENSPANG00000018873CSDE110077.662Papio_anubis
ENSSLDG00000008819csde110087.109ENSPKIG00000009459csde110087.109Paramormyrops_kingsleyae
ENSSLDG00000008819csde19681.678ENSPSIG00000003823CSDE19681.678Pelodiscus_sinensis
ENSSLDG00000008819csde110091.547ENSPMGG00000000772csde110091.547Periophthalmus_magnuspinnatus
ENSSLDG00000008819csde110077.029ENSPEMG00000020357-10077.029Peromyscus_maniculatus_bairdii
ENSSLDG00000008819csde110078.652ENSPCIG00000022587CSDE110078.652Phascolarctos_cinereus
ENSSLDG00000008819csde19791.291ENSPFOG00000012664csde110091.757Poecilia_formosa
ENSSLDG00000008819csde19586.329ENSPLAG00000017680csde19386.329Poecilia_latipinna
ENSSLDG00000008819csde19586.482ENSPMEG00000005094csde19586.482Poecilia_mexicana
ENSSLDG00000008819csde110092.062ENSPREG00000011631csde110092.299Poecilia_reticulata
ENSSLDG00000008819csde110077.154ENSPPYG00000000996CSDE110077.154Pongo_abelii
ENSSLDG00000008819csde110083.495ENSPCAG00000014368CSDE19083.495Procavia_capensis
ENSSLDG00000008819csde19069.888ENSPCOG00000008223-9269.888Propithecus_coquereli
ENSSLDG00000008819csde110077.922ENSPCOG00000017893CSDE110077.922Propithecus_coquereli
ENSSLDG00000008819csde110072.597ENSPVAG00000008225CSDE19572.597Pteropus_vampyrus
ENSSLDG00000008819csde110094.408ENSPNYG00000013745csde110094.408Pundamilia_nyererei
ENSSLDG00000008819csde110088.000ENSPNAG00000001958csde110087.808Pygocentrus_nattereri
ENSSLDG00000008819csde110076.779ENSRNOG00000061058Csde110076.779Rattus_norvegicus
ENSSLDG00000008819csde110074.708ENSRBIG00000038088-10074.708Rhinopithecus_bieti
ENSSLDG00000008819csde110073.247ENSRBIG00000038966-9871.773Rhinopithecus_bieti
ENSSLDG00000008819csde110077.662ENSRROG00000043101CSDE19777.662Rhinopithecus_roxellana
ENSSLDG00000008819csde110077.532ENSSBOG00000035592CSDE19876.145Saimiri_boliviensis_boliviensis
ENSSLDG00000008819csde110079.091ENSSHAG00000009831CSDE110079.091Sarcophilus_harrisii
ENSSLDG00000008819csde110085.325ENSSFOG00015007498csde110085.325Scleropages_formosus
ENSSLDG00000008819csde110096.094ENSSMAG00000007203csde110096.094Scophthalmus_maximus
ENSSLDG00000008819csde1100100.000ENSSDUG00000015380csde1100100.000Seriola_dumerili
ENSSLDG00000008819csde110077.273ENSSARG00000000738CSDE19477.273Sorex_araneus
ENSSLDG00000008819csde110080.234ENSSPUG00000008714CSDE110080.234Sphenodon_punctatus
ENSSLDG00000008819csde110096.875ENSSPAG00000000716csde110096.875Stegastes_partitus
ENSSLDG00000008819csde110078.052ENSSSCG00000006752CSDE110078.052Sus_scrofa
ENSSLDG00000008819csde110078.180ENSTGUG00000000972CSDE110078.180Taeniopygia_guttata
ENSSLDG00000008819csde110087.891ENSTRUG00000007996csde110087.891Takifugu_rubripes
ENSSLDG00000008819csde19394.636ENSTNIG00000010878csde110094.636Tetraodon_nigroviridis
ENSSLDG00000008819csde19279.755ENSTBEG00000011880-6476.250Tupaia_belangeri
ENSSLDG00000008819csde110077.143ENSTTRG00000015583CSDE19972.695Tursiops_truncatus
ENSSLDG00000008819csde19281.433ENSUAMG00000021779-9981.029Ursus_americanus
ENSSLDG00000008819csde18773.558ENSUAMG00000024289-9973.558Ursus_americanus
ENSSLDG00000008819csde19773.460ENSUMAG00000011714-9973.460Ursus_maritimus
ENSSLDG00000008819csde110071.558ENSUMAG00000009720-9771.558Ursus_maritimus
ENSSLDG00000008819csde110080.233ENSVPAG00000000749CSDE17980.233Vicugna_pacos
ENSSLDG00000008819csde19376.565ENSVVUG00000009890CSDE19476.565Vulpes_vulpes
ENSSLDG00000008819csde110078.731ENSXETG00000021448csde110078.731Xenopus_tropicalis
ENSSLDG00000008819csde19494.989ENSXCOG00000000035csde18994.989Xiphophorus_couchianus
ENSSLDG00000008819csde110092.481ENSXMAG00000009080csde110092.299Xiphophorus_maculatus

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