EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000009026 (Gene tree)
Gene ID: -
Gene Symbol: shrprbck1r
Alias: sipl1-rbck1|zgc:175152
Full Name: ranBP-type and C3HC4-type zinc finger-containing protein 1
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Plus strand
Length: 11452 bases
Position: chrPEQF01099049.1:2757800-2769251
Accession: 111662905
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000011408	zf-RanBP	PF00641.18	2.7e-06	1	1
ENSSLDP00000011380	zf-RanBP	PF00641.18	2.7e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000011791	-	3841	XM_023416931	ENSSLDP00000011380	709 (aa)	XP_023272699	UPI000C6FB2B3
ENSSLDT00000011819	-	2124	-	ENSSLDP00000011408	707 (aa)	-	-

Gene Model

Click here to download ENSSLDG00000009026's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000009026's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000009026	shrprbck1r	76	44.954	ENSSLDG00000008305	rbck1	99	45.803

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000009026	shrprbck1r	60	58.333	ENSAPOG00000023352	sharpin	95	57.407	Acanthochromis_polyacanthus
ENSSLDG00000009026	shrprbck1r	100	86.872	ENSAPOG00000022737	shrprbck1r	100	86.313	Acanthochromis_polyacanthus
ENSSLDG00000009026	shrprbck1r	100	84.810	ENSACIG00000002184	shrprbck1r	100	84.810	Amphilophus_citrinellus
ENSSLDG00000009026	shrprbck1r	60	58.565	ENSAOCG00000017464	sharpin	95	57.639	Amphiprion_ocellaris
ENSSLDG00000009026	shrprbck1r	100	89.341	ENSAOCG00000002890	shrprbck1r	100	88.920	Amphiprion_ocellaris
ENSSLDG00000009026	shrprbck1r	60	58.565	ENSAPEG00000004049	sharpin	95	57.639	Amphiprion_percula
ENSSLDG00000009026	shrprbck1r	100	86.816	ENSAPEG00000023274	shrprbck1r	100	86.115	Amphiprion_percula
ENSSLDG00000009026	shrprbck1r	60	59.491	ENSATEG00000007832	sharpin	88	58.565	Anabas_testudineus
ENSSLDG00000009026	shrprbck1r	100	86.319	ENSATEG00000014561	shrprbck1r	100	86.319	Anabas_testudineus
ENSSLDG00000009026	shrprbck1r	100	85.232	ENSACLG00000022609	shrprbck1r	100	85.232	Astatotilapia_calliptera
ENSSLDG00000009026	shrprbck1r	100	70.845	ENSAMXG00000021016	shrprbck1r	100	70.652	Astyanax_mexicanus
ENSSLDG00000009026	shrprbck1r	55	56.923	ENSAMXG00000006229	sharpin	97	56.555	Astyanax_mexicanus
ENSSLDG00000009026	shrprbck1r	100	81.013	ENSCSEG00000011306	shrprbck1r	100	81.013	Cynoglossus_semilaevis
ENSSLDG00000009026	shrprbck1r	65	53.151	ENSCVAG00000006586	sharpin	99	51.891	Cyprinodon_variegatus
ENSSLDG00000009026	shrprbck1r	100	81.268	ENSCVAG00000007250	shrprbck1r	100	80.845	Cyprinodon_variegatus
ENSSLDG00000009026	shrprbck1r	100	72.138	ENSDARG00000059871	shrprbck1r	100	72.552	Danio_rerio
ENSSLDG00000009026	shrprbck1r	55	55.385	ENSDARG00000076995	sharpin	94	55.385	Danio_rerio
ENSSLDG00000009026	shrprbck1r	100	76.816	ENSELUG00000016022	shrprbck1r	100	76.676	Esox_lucius
ENSSLDG00000009026	shrprbck1r	59	55.275	ENSFHEG00000013564	sharpin	94	54.128	Fundulus_heteroclitus
ENSSLDG00000009026	shrprbck1r	54	61.607	ENSGMOG00000010123	sharpin	93	62.121	Gadus_morhua
ENSSLDG00000009026	shrprbck1r	59	44.368	ENSGAFG00000021405	sharpin	95	43.418	Gambusia_affinis
ENSSLDG00000009026	shrprbck1r	100	80.986	ENSGAFG00000009309	shrprbck1r	100	80.563	Gambusia_affinis
ENSSLDG00000009026	shrprbck1r	75	83.459	ENSGACG00000002544	shrprbck1r	100	83.459	Gasterosteus_aculeatus
ENSSLDG00000009026	shrprbck1r	100	85.232	ENSHBUG00000021933	shrprbck1r	100	85.232	Haplochromis_burtoni
ENSSLDG00000009026	shrprbck1r	60	54.009	ENSHCOG00000018847	sharpin	80	53.882	Hippocampus_comes
ENSSLDG00000009026	shrprbck1r	54	56.122	ENSIPUG00000011951	sharpin	94	88.462	Ictalurus_punctatus
ENSSLDG00000009026	shrprbck1r	96	70.317	ENSIPUG00000014247	shrprbck1r	100	68.000	Ictalurus_punctatus
ENSSLDG00000009026	shrprbck1r	100	80.414	ENSKMAG00000015215	shrprbck1r	100	80.194	Kryptolebias_marmoratus
ENSSLDG00000009026	shrprbck1r	60	58.796	ENSKMAG00000015204	sharpin	76	57.870	Kryptolebias_marmoratus
ENSSLDG00000009026	shrprbck1r	100	88.028	ENSLBEG00000016876	shrprbck1r	100	88.028	Labrus_bergylta
ENSSLDG00000009026	shrprbck1r	60	59.174	ENSLBEG00000016624	sharpin	96	58.257	Labrus_bergylta
ENSSLDG00000009026	shrprbck1r	95	53.130	ENSLACG00000010948	-	97	53.130	Latimeria_chalumnae
ENSSLDG00000009026	shrprbck1r	100	68.880	ENSLOCG00000008910	shrprbck1r	100	69.655	Lepisosteus_oculatus
ENSSLDG00000009026	shrprbck1r	100	86.037	ENSMAMG00000022930	shrprbck1r	100	86.037	Mastacembelus_armatus
ENSSLDG00000009026	shrprbck1r	50	70.968	ENSMAMG00000014645	sharpin	92	70.968	Mastacembelus_armatus
ENSSLDG00000009026	shrprbck1r	100	85.091	ENSMZEG00005021257	shrprbck1r	100	85.091	Maylandia_zebra
ENSSLDG00000009026	shrprbck1r	100	82.263	ENSMMOG00000003764	shrprbck1r	100	82.263	Mola_mola
ENSSLDG00000009026	shrprbck1r	96	87.040	ENSMALG00000008861	shrprbck1r	95	87.040	Monopterus_albus
ENSSLDG00000009026	shrprbck1r	50	70.968	ENSMALG00000020528	sharpin	93	70.968	Monopterus_albus
ENSSLDG00000009026	shrprbck1r	100	85.795	ENSNBRG00000002270	shrprbck1r	100	85.795	Neolamprologus_brichardi
ENSSLDG00000009026	shrprbck1r	55	56.098	ENSONIG00000009626	-	97	54.878	Oreochromis_niloticus
ENSSLDG00000009026	shrprbck1r	100	84.951	ENSONIG00000014401	shrprbck1r	100	84.951	Oreochromis_niloticus
ENSSLDG00000009026	shrprbck1r	60	56.335	ENSORLG00000017281	sharpin	95	55.204	Oryzias_latipes
ENSSLDG00000009026	shrprbck1r	100	81.549	ENSORLG00000007392	shrprbck1r	100	80.845	Oryzias_latipes
ENSSLDG00000009026	shrprbck1r	100	81.127	ENSORLG00020018619	shrprbck1r	100	80.423	Oryzias_latipes_hni
ENSSLDG00000009026	shrprbck1r	60	56.463	ENSORLG00020000801	sharpin	95	55.329	Oryzias_latipes_hni
ENSSLDG00000009026	shrprbck1r	100	80.704	ENSORLG00015018865	shrprbck1r	100	80.563	Oryzias_latipes_hsok
ENSSLDG00000009026	shrprbck1r	60	56.463	ENSORLG00015009860	sharpin	95	55.329	Oryzias_latipes_hsok
ENSSLDG00000009026	shrprbck1r	59	44.208	ENSOMEG00000005729	sharpin	85	76.923	Oryzias_melastigma
ENSSLDG00000009026	shrprbck1r	100	82.394	ENSOMEG00000012749	shrprbck1r	100	81.690	Oryzias_melastigma
ENSSLDG00000009026	shrprbck1r	100	72.664	ENSPKIG00000006933	shrprbck1r	100	73.082	Paramormyrops_kingsleyae
ENSSLDG00000009026	shrprbck1r	65	60.934	ENSPKIG00000018308	-	96	60.510	Paramormyrops_kingsleyae
ENSSLDG00000009026	shrprbck1r	100	78.169	ENSPMGG00000013254	shrprbck1r	100	78.169	Periophthalmus_magnuspinnatus
ENSSLDG00000009026	shrprbck1r	100	82.254	ENSPFOG00000004214	shrprbck1r	100	81.972	Poecilia_formosa
ENSSLDG00000009026	shrprbck1r	59	54.566	ENSPFOG00000015253	sharpin	87	76.923	Poecilia_formosa
ENSSLDG00000009026	shrprbck1r	100	82.113	ENSPLAG00000020523	shrprbck1r	100	81.831	Poecilia_latipinna
ENSSLDG00000009026	shrprbck1r	59	54.795	ENSPLAG00000000423	sharpin	95	53.670	Poecilia_latipinna
ENSSLDG00000009026	shrprbck1r	51	51.145	ENSPMEG00000023030	sharpin	89	51.145	Poecilia_mexicana
ENSSLDG00000009026	shrprbck1r	100	80.959	ENSPMEG00000006877	shrprbck1r	100	80.677	Poecilia_mexicana
ENSSLDG00000009026	shrprbck1r	100	79.296	ENSPREG00000014689	shrprbck1r	100	79.014	Poecilia_reticulata
ENSSLDG00000009026	shrprbck1r	65	52.092	ENSPREG00000009702	sharpin	99	51.050	Poecilia_reticulata
ENSSLDG00000009026	shrprbck1r	100	85.654	ENSPNYG00000022601	shrprbck1r	100	85.654	Pundamilia_nyererei
ENSSLDG00000009026	shrprbck1r	100	70.742	ENSPNAG00000007847	shrprbck1r	100	70.588	Pygocentrus_nattereri
ENSSLDG00000009026	shrprbck1r	55	55.527	ENSPNAG00000002911	sharpin	99	55.641	Pygocentrus_nattereri
ENSSLDG00000009026	shrprbck1r	76	63.636	ENSSFOG00015014150	-	98	63.060	Scleropages_formosus
ENSSLDG00000009026	shrprbck1r	59	68.750	ENSSFOG00015004028	sharpin	99	54.000	Scleropages_formosus
ENSSLDG00000009026	shrprbck1r	100	85.237	ENSSMAG00000018085	shrprbck1r	100	85.237	Scophthalmus_maximus
ENSSLDG00000009026	shrprbck1r	60	46.009	ENSSDUG00000019039	sharpin	96	44.811	Seriola_dumerili
ENSSLDG00000009026	shrprbck1r	100	98.307	ENSSDUG00000002959	shrprbck1r	100	98.307	Seriola_dumerili
ENSSLDG00000009026	shrprbck1r	96	85.486	ENSSPAG00000016097	shrprbck1r	99	85.051	Stegastes_partitus
ENSSLDG00000009026	shrprbck1r	60	54.225	ENSTRUG00000011046	sharpin	88	74.074	Takifugu_rubripes
ENSSLDG00000009026	shrprbck1r	100	81.435	ENSTRUG00000006949	shrprbck1r	100	81.435	Takifugu_rubripes
ENSSLDG00000009026	shrprbck1r	55	56.965	ENSTNIG00000008521	sharpin	94	56.675	Tetraodon_nigroviridis
ENSSLDG00000009026	shrprbck1r	50	76.923	ENSXCOG00000015019	sharpin	93	61.765	Xiphophorus_couchianus
ENSSLDG00000009026	shrprbck1r	100	78.451	ENSXCOG00000006701	shrprbck1r	100	78.169	Xiphophorus_couchianus
ENSSLDG00000009026	shrprbck1r	65	52.830	ENSXMAG00000022076	sharpin	99	51.789	Xiphophorus_maculatus
ENSSLDG00000009026	shrprbck1r	100	78.592	ENSXMAG00000018972	shrprbck1r	100	78.310	Xiphophorus_maculatus