EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000009061 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 3673 bases
Position: chrPEQF01099459.1:520356-524028
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000011604	zf-C2H2	PF00096.26	3.8e-29	1	6
ENSSLDP00000011604	zf-C2H2	PF00096.26	3.8e-29	2	6
ENSSLDP00000011604	zf-C2H2	PF00096.26	3.8e-29	3	6
ENSSLDP00000011604	zf-C2H2	PF00096.26	3.8e-29	4	6
ENSSLDP00000011604	zf-C2H2	PF00096.26	3.8e-29	5	6
ENSSLDP00000011604	zf-C2H2	PF00096.26	3.8e-29	6	6
ENSSLDP00000011529	zf-C2H2	PF00096.26	1.4e-23	1	4
ENSSLDP00000011529	zf-C2H2	PF00096.26	1.4e-23	2	4
ENSSLDP00000011529	zf-C2H2	PF00096.26	1.4e-23	3	4
ENSSLDP00000011529	zf-C2H2	PF00096.26	1.4e-23	4	4
ENSSLDP00000011458	zf-C2H2	PF00096.26	1.7e-22	1	4
ENSSLDP00000011458	zf-C2H2	PF00096.26	1.7e-22	2	4
ENSSLDP00000011458	zf-C2H2	PF00096.26	1.7e-22	3	4
ENSSLDP00000011458	zf-C2H2	PF00096.26	1.7e-22	4	4
ENSSLDP00000011560	zf-C2H2	PF00096.26	7.1e-22	1	4
ENSSLDP00000011560	zf-C2H2	PF00096.26	7.1e-22	2	4
ENSSLDP00000011560	zf-C2H2	PF00096.26	7.1e-22	3	4
ENSSLDP00000011560	zf-C2H2	PF00096.26	7.1e-22	4	4
ENSSLDP00000011604	zf-met	PF12874.7	2.1e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000011941	-	753	-	ENSSLDP00000011529	250 (aa)	-	-
ENSSLDT00000011973	-	633	-	ENSSLDP00000011560	210 (aa)	-	-
ENSSLDT00000012017	-	696	-	ENSSLDP00000011604	231 (aa)	-	-
ENSSLDT00000011871	-	672	-	ENSSLDP00000011458	223 (aa)	-	-

Gene Model

Click here to download ENSSLDG00000009061's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000009061's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000009061	-	93	36.709	ENSSLDG00000014166	znf319b	78	43.182
ENSSLDG00000009061	-	72	58.182	ENSSLDG00000018033	-	68	52.033
ENSSLDG00000009061	-	90	48.571	ENSSLDG00000020727	-	96	50.000
ENSSLDG00000009061	-	83	52.308	ENSSLDG00000016317	-	85	49.194
ENSSLDG00000009061	-	90	50.000	ENSSLDG00000000202	-	96	51.852
ENSSLDG00000009061	-	91	45.763	ENSSLDG00000000203	-	93	40.541
ENSSLDG00000009061	-	91	37.681	ENSSLDG00000017614	-	92	50.000
ENSSLDG00000009061	-	93	39.459	ENSSLDG00000023661	-	83	39.459
ENSSLDG00000009061	-	91	45.614	ENSSLDG00000013760	-	95	46.610
ENSSLDG00000009061	-	92	36.530	ENSSLDG00000006724	-	93	44.348
ENSSLDG00000009061	-	95	48.387	ENSSLDG00000012133	-	80	50.000
ENSSLDG00000009061	-	90	38.182	ENSSLDG00000013823	gfi1b	51	46.087
ENSSLDG00000009061	-	96	39.013	ENSSLDG00000013170	zbtb17	85	40.984
ENSSLDG00000009061	-	92	34.513	ENSSLDG00000011849	-	52	34.513
ENSSLDG00000009061	-	93	40.288	ENSSLDG00000014177	zbtb47b	75	38.356
ENSSLDG00000009061	-	83	45.205	ENSSLDG00000001850	-	53	45.217
ENSSLDG00000009061	-	91	35.714	ENSSLDG00000000457	-	67	44.068
ENSSLDG00000009061	-	92	46.479	ENSSLDG00000004098	-	96	46.479
ENSSLDG00000009061	-	92	52.727	ENSSLDG00000020675	-	95	52.727
ENSSLDG00000009061	-	90	41.071	ENSSLDG00000006217	-	87	40.764
ENSSLDG00000009061	-	90	44.444	ENSSLDG00000007524	-	68	44.643
ENSSLDG00000009061	-	90	41.667	ENSSLDG00000009821	-	95	39.024
ENSSLDG00000009061	-	91	39.474	ENSSLDG00000020432	-	86	49.206
ENSSLDG00000009061	-	94	45.161	ENSSLDG00000001860	-	79	48.246
ENSSLDG00000009061	-	90	32.857	ENSSLDG00000016512	gfi1aa	60	44.348
ENSSLDG00000009061	-	90	40.476	ENSSLDG00000000352	-	70	46.667
ENSSLDG00000009061	-	94	37.037	ENSSLDG00000003269	znf710b	53	37.288
ENSSLDG00000009061	-	98	37.838	ENSSLDG00000000432	-	99	43.678
ENSSLDG00000009061	-	97	40.678	ENSSLDG00000021177	zbtb41	52	40.909
ENSSLDG00000009061	-	91	53.623	ENSSLDG00000018273	-	78	53.846
ENSSLDG00000009061	-	91	54.237	ENSSLDG00000010390	-	82	51.515
ENSSLDG00000009061	-	92	38.424	ENSSLDG00000021278	-	60	46.429
ENSSLDG00000009061	-	97	36.697	ENSSLDG00000015116	-	78	35.371
ENSSLDG00000009061	-	92	36.364	ENSSLDG00000007568	-	73	40.909
ENSSLDG00000009061	-	95	46.429	ENSSLDG00000012821	znf236	66	46.429
ENSSLDG00000009061	-	90	31.707	ENSSLDG00000014436	-	79	36.806
ENSSLDG00000009061	-	91	35.455	ENSSLDG00000013353	prdm5	77	35.455
ENSSLDG00000009061	-	89	30.928	ENSSLDG00000025359	-	55	32.990
ENSSLDG00000009061	-	93	40.465	ENSSLDG00000018493	-	81	49.123
ENSSLDG00000009061	-	91	51.923	ENSSLDG00000002515	-	62	51.923
ENSSLDG00000009061	-	91	38.462	ENSSLDG00000020455	-	84	48.889
ENSSLDG00000009061	-	90	34.802	ENSSLDG00000000859	-	81	34.802
ENSSLDG00000009061	-	98	47.761	ENSSLDG00000007756	-	92	54.902
ENSSLDG00000009061	-	91	34.101	ENSSLDG00000017718	zbtb48	54	41.593
ENSSLDG00000009061	-	94	49.153	ENSSLDG00000005850	-	92	48.305
ENSSLDG00000009061	-	95	36.744	ENSSLDG00000000376	-	72	43.210
ENSSLDG00000009061	-	97	34.483	ENSSLDG00000016301	-	87	42.735
ENSSLDG00000009061	-	92	33.921	ENSSLDG00000005670	-	85	42.241
ENSSLDG00000009061	-	97	48.276	ENSSLDG00000001787	zbtb24	99	43.182
ENSSLDG00000009061	-	93	52.542	ENSSLDG00000008645	-	94	39.560
ENSSLDG00000009061	-	90	48.387	ENSSLDG00000015049	-	93	48.387
ENSSLDG00000009061	-	92	36.364	ENSSLDG00000025265	znf526	52	36.364
ENSSLDG00000009061	-	92	35.644	ENSSLDG00000002776	-	66	44.954
ENSSLDG00000009061	-	90	41.071	ENSSLDG00000005868	-	89	40.764
ENSSLDG00000009061	-	92	42.424	ENSSLDG00000018598	-	86	53.125
ENSSLDG00000009061	-	90	36.932	ENSSLDG00000020990	-	50	46.957
ENSSLDG00000009061	-	92	39.007	ENSSLDG00000023060	-	70	44.828
ENSSLDG00000009061	-	93	31.905	ENSSLDG00000024295	ZNF319	90	44.318
ENSSLDG00000009061	-	87	53.659	ENSSLDG00000009582	-	94	53.659
ENSSLDG00000009061	-	92	46.479	ENSSLDG00000012036	-	98	46.479
ENSSLDG00000009061	-	90	36.792	ENSSLDG00000005839	-	60	44.828
ENSSLDG00000009061	-	91	50.847	ENSSLDG00000017937	-	95	52.083
ENSSLDG00000009061	-	87	30.986	ENSSLDG00000012852	snai2	86	30.986
ENSSLDG00000009061	-	96	40.141	ENSSLDG00000012320	-	93	51.562
ENSSLDG00000009061	-	92	40.000	ENSSLDG00000006994	-	99	39.759
ENSSLDG00000009061	-	94	40.496	ENSSLDG00000004485	-	62	32.367
ENSSLDG00000009061	-	91	40.000	ENSSLDG00000004005	-	65	40.000
ENSSLDG00000009061	-	97	34.286	ENSSLDG00000018521	znf646	57	34.286
ENSSLDG00000009061	-	92	40.876	ENSSLDG00000010190	-	80	40.876
ENSSLDG00000009061	-	92	37.705	ENSSLDG00000006288	-	95	46.610
ENSSLDG00000009061	-	93	38.806	ENSSLDG00000020655	-	55	54.237
ENSSLDG00000009061	-	91	40.000	ENSSLDG00000002756	-	81	44.068
ENSSLDG00000009061	-	93	52.542	ENSSLDG00000004756	-	88	50.862

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000009061	-	90	56.585	ENSETEG00000006796	-	70	75.221	Echinops_telfairi