EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSSLDG00000009165 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: polyadenylate-binding protein 1-like
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 949 bases
Position: chrPEQF01050179.1:6-954
Accession: 111670194
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000011542	RRM_1	PF00076.22	9e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000011955	-	414	XM_023426819	ENSSLDP00000011542	137 (aa)	XP_023282587	-

Gene Model

Click here to download ENSSLDG00000009165's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000009165's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSSLDG00000009165	-	82	32.500	ENSSLDG00000013769	elavl3	66	32.500
ENSSLDG00000009165	-	58	34.722	ENSSLDG00000022499	elavl1a	64	34.722
ENSSLDG00000009165	-	55	33.333	ENSSLDG00000014858	-	74	33.333
ENSSLDG00000009165	-	82	33.750	ENSSLDG00000005260	elavl4	57	33.750
ENSSLDG00000009165	-	99	96.429	ENSSLDG00000014156	pabpc1b	59	96.429
ENSSLDG00000009165	-	99	74.815	ENSSLDG00000006981	pabpc1l	87	67.164
ENSSLDG00000009165	-	99	90.370	ENSSLDG00000011661	pabpc1a	58	90.370
ENSSLDG00000009165	-	82	30.769	ENSSLDG00000008455	ELAVL2	72	30.769
ENSSLDG00000009165	-	99	78.519	ENSSLDG00000013025	pabpc4	63	78.519
ENSSLDG00000009165	-	74	34.722	ENSSLDG00000019362	-	72	34.722

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000009165	-	99	89.630	ENSG00000070756	PABPC1	97	84.286	Homo_sapiens
ENSSLDG00000009165	-	99	90.370	ENSAPLG00000001129	PABPC1	50	90.370	Anas_platyrhynchos
ENSSLDG00000009165	-	99	74.615	ENSANAG00000036324	-	51	73.077	Aotus_nancymaae
ENSSLDG00000009165	-	99	82.222	ENSANAG00000027730	-	59	82.222	Aotus_nancymaae
ENSSLDG00000009165	-	99	63.704	ENSANAG00000019222	-	60	63.704	Aotus_nancymaae
ENSSLDG00000009165	-	99	89.630	ENSANAG00000033352	-	58	89.630	Aotus_nancymaae
ENSSLDG00000009165	-	99	89.630	ENSAMXG00000018395	-	63	89.630	Astyanax_mexicanus
ENSSLDG00000009165	-	100	89.781	ENSBTAG00000046358	PABPC1	58	89.781	Bos_taurus
ENSSLDG00000009165	-	99	79.259	ENSCJAG00000045282	-	52	79.259	Callithrix_jacchus
ENSSLDG00000009165	-	99	89.630	ENSCJAG00000015833	PABPC1	58	89.630	Callithrix_jacchus
ENSSLDG00000009165	-	99	85.926	ENSCJAG00000041162	-	74	85.926	Callithrix_jacchus
ENSSLDG00000009165	-	99	89.630	ENSCAFG00000000567	PABPC1	58	89.630	Canis_familiaris
ENSSLDG00000009165	-	99	89.630	ENSCAFG00020000440	PABPC1	58	89.630	Canis_lupus_dingo
ENSSLDG00000009165	-	99	89.630	ENSCHIG00000023714	PABPC1	92	98.000	Capra_hircus
ENSSLDG00000009165	-	99	89.630	ENSTSYG00000004229	PABPC1	58	89.630	Carlito_syrichta
ENSSLDG00000009165	-	99	83.704	ENSTSYG00000033737	-	75	83.704	Carlito_syrichta
ENSSLDG00000009165	-	99	82.963	ENSTSYG00000037130	-	86	82.963	Carlito_syrichta
ENSSLDG00000009165	-	99	89.630	ENSCAPG00000013098	PABPC1	51	89.630	Cavia_aperea
ENSSLDG00000009165	-	99	85.926	ENSCCAG00000037208	PABPC3	58	85.926	Cebus_capucinus
ENSSLDG00000009165	-	99	89.630	ENSCCAG00000037733	-	65	89.630	Cebus_capucinus
ENSSLDG00000009165	-	99	79.259	ENSCCAG00000031444	-	55	79.259	Cebus_capucinus
ENSSLDG00000009165	-	99	74.815	ENSCCAG00000028512	-	66	74.815	Cebus_capucinus
ENSSLDG00000009165	-	99	80.000	ENSCCAG00000031750	-	50	80.000	Cebus_capucinus
ENSSLDG00000009165	-	99	88.235	ENSCATG00000029313	PABPC3	58	88.235	Cercocebus_atys
ENSSLDG00000009165	-	99	89.630	ENSCATG00000039184	PABPC1	58	89.630	Cercocebus_atys
ENSSLDG00000009165	-	99	74.074	ENSCATG00000044984	-	57	74.074	Cercocebus_atys
ENSSLDG00000009165	-	98	68.657	ENSCATG00000045341	-	57	68.657	Cercocebus_atys
ENSSLDG00000009165	-	99	89.630	ENSCLAG00000009676	PABPC1	50	89.630	Chinchilla_lanigera
ENSSLDG00000009165	-	99	89.630	ENSCSAG00000012017	PABPC1	58	89.630	Chlorocebus_sabaeus
ENSSLDG00000009165	-	99	89.630	ENSCPBG00000005782	PABPC1	58	89.630	Chrysemys_picta_bellii
ENSSLDG00000009165	-	99	89.630	ENSCANG00000021524	PABPC1	58	89.630	Colobus_angolensis_palliatus
ENSSLDG00000009165	-	87	87.629	ENSCANG00000036233	-	64	87.629	Colobus_angolensis_palliatus
ENSSLDG00000009165	-	99	85.294	ENSCANG00000041712	PABPC3	58	85.294	Colobus_angolensis_palliatus
ENSSLDG00000009165	-	99	89.706	ENSCGRG00001022067	-	58	89.706	Cricetulus_griseus_chok1gshd
ENSSLDG00000009165	-	99	80.882	ENSCGRG00001007983	Pabpc6	59	80.882	Cricetulus_griseus_chok1gshd
ENSSLDG00000009165	-	99	80.882	ENSCGRG00000019560	Pabpc6	59	80.882	Cricetulus_griseus_crigri
ENSSLDG00000009165	-	99	89.630	ENSCGRG00000006487	-	50	89.630	Cricetulus_griseus_crigri
ENSSLDG00000009165	-	99	89.630	ENSDNOG00000008718	PABPC1	58	89.630	Dasypus_novemcinctus
ENSSLDG00000009165	-	99	82.418	ENSDNOG00000006598	-	64	82.418	Dasypus_novemcinctus
ENSSLDG00000009165	-	99	90.370	ENSDORG00000013935	Pabpc1	58	90.370	Dipodomys_ordii
ENSSLDG00000009165	-	99	89.630	ENSEASG00005002810	PABPC1	58	89.630	Equus_asinus_asinus
ENSSLDG00000009165	-	97	62.406	ENSEASG00005014126	-	70	50.746	Equus_asinus_asinus
ENSSLDG00000009165	-	99	89.630	ENSECAG00000020699	PABPC1	58	89.630	Equus_caballus
ENSSLDG00000009165	-	99	90.076	ENSEEUG00000002701	PABPC1	50	90.076	Erinaceus_europaeus
ENSSLDG00000009165	-	98	53.731	ENSELUG00000005247	-	74	53.731	Esox_lucius
ENSSLDG00000009165	-	99	89.630	ENSFCAG00000001874	PABPC1	59	89.630	Felis_catus
ENSSLDG00000009165	-	99	90.370	ENSFALG00000005841	PABPC1	50	90.370	Ficedula_albicollis
ENSSLDG00000009165	-	99	89.630	ENSFDAG00000005583	PABPC1	50	89.630	Fukomys_damarensis
ENSSLDG00000009165	-	99	90.370	ENSGALG00000030280	PABPC1	58	90.370	Gallus_gallus
ENSSLDG00000009165	-	99	90.441	ENSGAGG00000000869	PABPC1	58	90.370	Gopherus_agassizii
ENSSLDG00000009165	-	99	89.630	ENSGGOG00000006785	-	57	89.630	Gorilla_gorilla
ENSSLDG00000009165	-	99	36.937	ENSGGOG00000041637	-	53	35.043	Gorilla_gorilla
ENSSLDG00000009165	-	99	89.630	ENSHGLG00000007713	-	58	89.630	Heterocephalus_glaber_female
ENSSLDG00000009165	-	99	89.630	ENSHGLG00100007448	-	50	89.630	Heterocephalus_glaber_male
ENSSLDG00000009165	-	63	34.884	ENSIPUG00000007890	-	53	34.884	Ictalurus_punctatus
ENSSLDG00000009165	-	99	35.870	ENSIPUG00000024284	-	55	35.870	Ictalurus_punctatus
ENSSLDG00000009165	-	95	58.889	ENSIPUG00000020086	-	96	58.889	Ictalurus_punctatus
ENSSLDG00000009165	-	99	89.630	ENSSTOG00000016395	PABPC3	61	89.630	Ictidomys_tridecemlineatus
ENSSLDG00000009165	-	99	65.185	ENSJJAG00000019230	Pabpc6	54	65.185	Jaculus_jaculus
ENSSLDG00000009165	-	99	89.630	ENSJJAG00000015918	Pabpc1	58	89.630	Jaculus_jaculus
ENSSLDG00000009165	-	99	91.111	ENSLACG00000004395	PABPC1	58	91.111	Latimeria_chalumnae
ENSSLDG00000009165	-	99	92.593	ENSLOCG00000009681	PABPC1	58	92.593	Lepisosteus_oculatus
ENSSLDG00000009165	-	100	89.781	ENSLAFG00000013994	PABPC1	59	89.781	Loxodonta_africana
ENSSLDG00000009165	-	91	66.667	ENSMFAG00000034213	-	56	66.667	Macaca_fascicularis
ENSSLDG00000009165	-	99	88.148	ENSMFAG00000004725	-	50	88.148	Macaca_fascicularis
ENSSLDG00000009165	-	99	87.500	ENSMFAG00000016858	PABPC3	58	87.500	Macaca_fascicularis
ENSSLDG00000009165	-	99	89.630	ENSMFAG00000044845	PABPC1	58	89.630	Macaca_fascicularis
ENSSLDG00000009165	-	99	89.630	ENSMMUG00000017786	PABPC1	57	89.630	Macaca_mulatta
ENSSLDG00000009165	-	99	88.148	ENSMMUG00000047411	-	56	88.148	Macaca_mulatta
ENSSLDG00000009165	-	99	87.500	ENSMMUG00000020835	PABPC3	76	87.500	Macaca_mulatta
ENSSLDG00000009165	-	99	89.630	ENSMNEG00000009340	-	69	89.630	Macaca_nemestrina
ENSSLDG00000009165	-	99	87.500	ENSMNEG00000042936	PABPC3	58	87.500	Macaca_nemestrina
ENSSLDG00000009165	-	91	65.041	ENSMLEG00000041649	-	56	65.041	Mandrillus_leucophaeus
ENSSLDG00000009165	-	99	88.971	ENSMLEG00000042214	PABPC3	58	88.971	Mandrillus_leucophaeus
ENSSLDG00000009165	-	99	89.630	ENSMLEG00000027792	-	57	89.630	Mandrillus_leucophaeus
ENSSLDG00000009165	-	99	78.519	ENSMAUG00000003031	Pabpc6	57	78.519	Mesocricetus_auratus
ENSSLDG00000009165	-	99	89.630	ENSMICG00000009121	PABPC1	69	89.630	Microcebus_murinus
ENSSLDG00000009165	-	99	85.926	ENSMICG00000011830	PABPC3	60	85.926	Microcebus_murinus
ENSSLDG00000009165	-	99	88.889	ENSMOCG00000004921	-	58	88.889	Microtus_ochrogaster
ENSSLDG00000009165	-	99	90.370	ENSMODG00000006222	PABPC1	58	90.370	Monodelphis_domestica
ENSSLDG00000009165	-	99	79.412	MGP_CAROLIEiJ_G0021058	Pabpc6	58	79.412	Mus_caroli
ENSSLDG00000009165	-	99	92.857	MGP_CAROLIEiJ_G0019740	Pabpc1	55	90.370	Mus_caroli
ENSSLDG00000009165	-	95	80.000	ENSMUSG00000046173	Pabpc6	58	80.000	Mus_musculus
ENSSLDG00000009165	-	99	90.370	ENSMUSG00000022283	Pabpc1	58	90.370	Mus_musculus
ENSSLDG00000009165	-	99	88.889	MGP_PahariEiJ_G0019749	Pabpc1	58	88.889	Mus_pahari
ENSSLDG00000009165	-	95	81.538	MGP_SPRETEiJ_G0021962	Pabpc6	58	81.538	Mus_spretus
ENSSLDG00000009165	-	99	90.370	MGP_SPRETEiJ_G0020636	Pabpc1	58	90.370	Mus_spretus
ENSSLDG00000009165	-	99	88.148	ENSMPUG00000015163	PABPC1	50	88.148	Mustela_putorius_furo
ENSSLDG00000009165	-	99	62.222	ENSMLUG00000030069	-	57	62.222	Myotis_lucifugus
ENSSLDG00000009165	-	94	79.845	ENSNGAG00000000987	Pabpc6	58	79.845	Nannospalax_galili
ENSSLDG00000009165	-	99	89.630	ENSNGAG00000000996	Pabpc1	58	89.630	Nannospalax_galili
ENSSLDG00000009165	-	99	64.444	ENSNGAG00000023773	-	51	64.444	Nannospalax_galili
ENSSLDG00000009165	-	99	75.556	ENSNLEG00000034666	-	67	75.556	Nomascus_leucogenys
ENSSLDG00000009165	-	99	89.630	ENSNLEG00000003142	-	58	89.630	Nomascus_leucogenys
ENSSLDG00000009165	-	99	55.556	ENSNLEG00000034154	-	76	55.556	Nomascus_leucogenys
ENSSLDG00000009165	-	99	89.630	ENSOPRG00000009667	PABPC3	58	89.630	Ochotona_princeps
ENSSLDG00000009165	-	99	87.407	ENSODEG00000013269	-	74	87.407	Octodon_degus
ENSSLDG00000009165	-	99	90.370	ENSOANG00000007307	PABPC1	58	90.370	Ornithorhynchus_anatinus
ENSSLDG00000009165	-	99	89.630	ENSOCUG00000004354	-	58	89.630	Oryctolagus_cuniculus
ENSSLDG00000009165	-	99	89.630	ENSOCUG00000023935	-	58	89.630	Oryctolagus_cuniculus
ENSSLDG00000009165	-	99	85.926	ENSOGAG00000007921	-	64	85.926	Otolemur_garnettii
ENSSLDG00000009165	-	99	79.412	ENSOGAG00000025522	-	57	80.000	Otolemur_garnettii
ENSSLDG00000009165	-	99	69.630	ENSOGAG00000033369	-	60	69.630	Otolemur_garnettii
ENSSLDG00000009165	-	99	89.630	ENSOARG00000000095	PABPC1	50	89.630	Ovis_aries
ENSSLDG00000009165	-	99	89.630	ENSPPAG00000037498	-	55	89.630	Pan_paniscus
ENSSLDG00000009165	-	99	89.630	ENSPPRG00000003755	PABPC1	59	89.630	Panthera_pardus
ENSSLDG00000009165	-	99	89.630	ENSPTIG00000021083	PABPC1	57	89.630	Panthera_tigris_altaica
ENSSLDG00000009165	-	99	89.630	ENSPTRG00000047939	PABPC1	61	89.630	Pan_troglodytes
ENSSLDG00000009165	-	99	89.630	ENSPANG00000010645	PABPC1	57	89.630	Papio_anubis
ENSSLDG00000009165	-	99	86.765	ENSPANG00000032213	PABPC3	58	86.765	Papio_anubis
ENSSLDG00000009165	-	99	77.778	ENSPANG00000032575	-	63	77.778	Papio_anubis
ENSSLDG00000009165	-	91	65.854	ENSPANG00000030537	-	57	65.854	Papio_anubis
ENSSLDG00000009165	-	99	92.857	ENSPKIG00000016835	-	56	92.857	Paramormyrops_kingsleyae
ENSSLDG00000009165	-	93	75.000	ENSPKIG00000002905	-	88	75.000	Paramormyrops_kingsleyae
ENSSLDG00000009165	-	93	75.000	ENSPKIG00000002089	-	88	75.000	Paramormyrops_kingsleyae
ENSSLDG00000009165	-	99	90.370	ENSPSIG00000003719	PABPC1	58	90.370	Pelodiscus_sinensis
ENSSLDG00000009165	-	99	90.370	ENSPCIG00000000267	-	61	90.370	Phascolarctos_cinereus
ENSSLDG00000009165	-	99	89.630	ENSPPYG00000018790	PABPC1	58	89.630	Pongo_abelii
ENSSLDG00000009165	-	99	60.000	ENSPPYG00000012833	-	80	60.000	Pongo_abelii
ENSSLDG00000009165	-	99	89.630	ENSPCOG00000020234	PABPC1	57	89.630	Propithecus_coquereli
ENSSLDG00000009165	-	99	87.407	ENSPCOG00000013197	PABPC3	57	87.407	Propithecus_coquereli
ENSSLDG00000009165	-	99	89.630	ENSPVAG00000016640	PABPC1	58	89.630	Pteropus_vampyrus
ENSSLDG00000009165	-	99	90.370	ENSRNOG00000008639	Pabpc1	69	90.370	Rattus_norvegicus
ENSSLDG00000009165	-	99	80.147	ENSRNOG00000017367	Pabpc6	58	80.147	Rattus_norvegicus
ENSSLDG00000009165	-	80	68.182	ENSRBIG00000027660	-	57	68.182	Rhinopithecus_bieti
ENSSLDG00000009165	-	99	77.358	ENSRBIG00000000042	-	53	77.358	Rhinopithecus_bieti
ENSSLDG00000009165	-	99	89.630	ENSRBIG00000029759	-	55	89.630	Rhinopithecus_bieti
ENSSLDG00000009165	-	99	87.500	ENSRBIG00000034396	PABPC3	58	87.500	Rhinopithecus_bieti
ENSSLDG00000009165	-	99	87.500	ENSRROG00000036871	PABPC3	58	87.500	Rhinopithecus_roxellana
ENSSLDG00000009165	-	80	67.273	ENSRROG00000044781	-	56	67.273	Rhinopithecus_roxellana
ENSSLDG00000009165	-	99	86.667	ENSRROG00000032349	-	57	86.667	Rhinopithecus_roxellana
ENSSLDG00000009165	-	99	89.630	ENSRROG00000042796	-	56	89.630	Rhinopithecus_roxellana
ENSSLDG00000009165	-	99	56.296	ENSRROG00000029758	-	68	56.296	Rhinopithecus_roxellana
ENSSLDG00000009165	-	99	87.407	ENSSBOG00000023677	PABPC3	57	87.407	Saimiri_boliviensis_boliviensis
ENSSLDG00000009165	-	99	89.630	ENSSBOG00000022216	PABPC1	53	46.000	Saimiri_boliviensis_boliviensis
ENSSLDG00000009165	-	100	78.261	ENSSBOG00000020745	-	62	78.261	Saimiri_boliviensis_boliviensis
ENSSLDG00000009165	-	99	76.296	ENSSBOG00000021975	-	82	76.296	Saimiri_boliviensis_boliviensis
ENSSLDG00000009165	-	99	80.741	ENSSFOG00015006617	-	58	80.741	Scleropages_formosus
ENSSLDG00000009165	-	99	90.370	ENSSPUG00000018267	PABPC1	58	90.370	Sphenodon_punctatus
ENSSLDG00000009165	-	99	85.938	ENSSPUG00000018259	-	68	85.938	Sphenodon_punctatus
ENSSLDG00000009165	-	99	89.630	ENSSSCG00000006063	PABPC1	69	89.630	Sus_scrofa
ENSSLDG00000009165	-	99	90.370	ENSTGUG00000012067	PABPC1	58	90.370	Taeniopygia_guttata
ENSSLDG00000009165	-	99	88.889	ENSTTRG00000004689	PABPC3	60	88.889	Tursiops_truncatus
ENSSLDG00000009165	-	99	89.630	ENSUAMG00000024428	PABPC1	61	89.630	Ursus_americanus
ENSSLDG00000009165	-	99	89.706	ENSUMAG00000017554	PABPC1	52	89.630	Ursus_maritimus
ENSSLDG00000009165	-	99	89.630	ENSVPAG00000003865	PABPC1	53	89.630	Vicugna_pacos
ENSSLDG00000009165	-	99	89.630	ENSVVUG00000013156	PABPC1	50	89.630	Vulpes_vulpes
ENSSLDG00000009165	-	99	89.630	ENSXETG00000006635	pabpc1	58	89.630	Xenopus_tropicalis