EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSSLDG00000009225 (Gene tree)
Gene ID: -
Gene Symbol: gpatch8
Alias: fa12a04|fb30h12|gpatc8|wu:fa12a04|wu:fb30h12|wu:fj32a09
Full Name: G-patch domain containing 8
Gene Type: protein_coding
Species: Seriola_lalandi_dorsalis
Status: putative
Strand: Minus strand
Length: 27693 bases
Position: chrPEQF01098998.1:716459-744151
Accession: 111660501
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSSLDP00000011595	zf-C2H2_jaz	PF12171.8	5.5e-06	1	1
ENSSLDP00000011595	G-patch	PF01585.23	9.8e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSSLDT00000012008	-	4581	XM_023413813	ENSSLDP00000011595	1498 (aa)	XP_023269581	UPI000C6F9C3A

Gene Model

Click here to download ENSSLDG00000009225's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSSLDG00000009225's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSSLDG00000009225	gpatch8	100	91.728	ENSAPOG00000023938	gpatch8	100	91.661	Acanthochromis_polyacanthus
ENSSLDG00000009225	gpatch8	100	88.630	ENSACIG00000012241	gpatch8	100	88.165	Amphilophus_citrinellus
ENSSLDG00000009225	gpatch8	100	91.461	ENSAOCG00000018102	gpatch8	100	91.394	Amphiprion_ocellaris
ENSSLDG00000009225	gpatch8	100	91.328	ENSAPEG00000016776	gpatch8	100	91.261	Amphiprion_percula
ENSSLDG00000009225	gpatch8	100	88.793	ENSATEG00000003247	gpatch8	100	88.659	Anabas_testudineus
ENSSLDG00000009225	gpatch8	100	88.016	ENSACLG00000004165	gpatch8	100	88.016	Astatotilapia_calliptera
ENSSLDG00000009225	gpatch8	96	62.111	ENSAMXG00000041683	gpatch8	56	63.048	Astyanax_mexicanus
ENSSLDG00000009225	gpatch8	100	84.133	ENSCSEG00000021277	gpatch8	100	83.800	Cynoglossus_semilaevis
ENSSLDG00000009225	gpatch8	100	83.665	ENSCVAG00000013477	gpatch8	100	83.533	Cyprinodon_variegatus
ENSSLDG00000009225	gpatch8	100	64.932	ENSDARG00000059768	gpatch8	56	61.789	Danio_rerio
ENSSLDG00000009225	gpatch8	61	65.907	ENSELUG00000019920	gpatch8	57	66.100	Esox_lucius
ENSSLDG00000009225	gpatch8	56	74.970	ENSFHEG00000005791	gpatch8	100	81.764	Fundulus_heteroclitus
ENSSLDG00000009225	gpatch8	59	59.717	ENSGALG00000041556	GPATCH8	59	62.934	Gallus_gallus
ENSSLDG00000009225	gpatch8	100	83.622	ENSGAFG00000018138	gpatch8	100	83.422	Gambusia_affinis
ENSSLDG00000009225	gpatch8	100	87.907	ENSHBUG00000002669	gpatch8	100	88.106	Haplochromis_burtoni
ENSSLDG00000009225	gpatch8	73	57.868	ENSHGLG00100010738	GPATCH8	93	58.191	Heterocephalus_glaber_male
ENSSLDG00000009225	gpatch8	100	74.901	ENSHCOG00000017518	gpatch8	100	74.305	Hippocampus_comes
ENSSLDG00000009225	gpatch8	59	62.486	ENSIPUG00000015431	gpatch8	55	61.144	Ictalurus_punctatus
ENSSLDG00000009225	gpatch8	100	84.518	ENSKMAG00000018364	gpatch8	100	84.120	Kryptolebias_marmoratus
ENSSLDG00000009225	gpatch8	100	86.760	ENSLBEG00000023352	gpatch8	100	86.693	Labrus_bergylta
ENSSLDG00000009225	gpatch8	61	81.034	ENSLOCG00000012265	gpatch8	72	75.177	Lepisosteus_oculatus
ENSSLDG00000009225	gpatch8	100	89.460	ENSMAMG00000001618	gpatch8	100	91.338	Mastacembelus_armatus
ENSSLDG00000009225	gpatch8	100	87.949	ENSMZEG00005022584	gpatch8	100	87.949	Maylandia_zebra
ENSSLDG00000009225	gpatch8	61	85.839	ENSMMOG00000020472	gpatch8	61	86.928	Mola_mola
ENSSLDG00000009225	gpatch8	100	87.026	ENSMALG00000004204	gpatch8	100	85.828	Monopterus_albus
ENSSLDG00000009225	gpatch8	50	61.494	ENSMLUG00000013840	GPATCH8	52	63.314	Myotis_lucifugus
ENSSLDG00000009225	gpatch8	100	88.149	ENSNBRG00000016402	gpatch8	100	88.282	Neolamprologus_brichardi
ENSSLDG00000009225	gpatch8	100	84.897	ENSONIG00000001292	gpatch8	100	87.274	Oreochromis_niloticus
ENSSLDG00000009225	gpatch8	61	78.067	ENSORLG00000028497	gpatch8	100	80.690	Oryzias_latipes
ENSSLDG00000009225	gpatch8	61	53.476	ENSPKIG00000018753	gpatch8	56	56.542	Paramormyrops_kingsleyae
ENSSLDG00000009225	gpatch8	56	55.869	ENSPKIG00000004860	GPATCH8	52	59.483	Paramormyrops_kingsleyae
ENSSLDG00000009225	gpatch8	100	79.670	ENSPMGG00000000730	gpatch8	99	79.433	Periophthalmus_magnuspinnatus
ENSSLDG00000009225	gpatch8	100	83.378	ENSPFOG00000014833	gpatch8	100	84.109	Poecilia_formosa
ENSSLDG00000009225	gpatch8	100	83.245	ENSPLAG00000001035	gpatch8	100	83.976	Poecilia_latipinna
ENSSLDG00000009225	gpatch8	100	83.777	ENSPMEG00000024032	gpatch8	100	84.109	Poecilia_mexicana
ENSSLDG00000009225	gpatch8	100	83.843	ENSPREG00000008911	gpatch8	100	83.843	Poecilia_reticulata
ENSSLDG00000009225	gpatch8	100	88.149	ENSPNYG00000009426	gpatch8	100	88.149	Pundamilia_nyererei
ENSSLDG00000009225	gpatch8	59	64.418	ENSPNAG00000016200	gpatch8	58	65.901	Pygocentrus_nattereri
ENSSLDG00000009225	gpatch8	55	56.381	ENSSFOG00015021377	-	55	56.977	Scleropages_formosus
ENSSLDG00000009225	gpatch8	56	59.444	ENSSFOG00015004299	GPATCH8	55	59.930	Scleropages_formosus
ENSSLDG00000009225	gpatch8	96	98.753	ENSSDUG00000018065	gpatch8	100	98.753	Seriola_dumerili
ENSSLDG00000009225	gpatch8	100	91.461	ENSSPAG00000011368	gpatch8	100	91.394	Stegastes_partitus
ENSSLDG00000009225	gpatch8	100	80.956	ENSTRUG00000020474	gpatch8	100	80.226	Takifugu_rubripes
ENSSLDG00000009225	gpatch8	62	59.107	ENSTBEG00000009486	GPATCH8	56	59.655	Tupaia_belangeri
ENSSLDG00000009225	gpatch8	100	82.903	ENSXCOG00000016680	gpatch8	100	82.903	Xiphophorus_couchianus
ENSSLDG00000009225	gpatch8	100	82.814	ENSXMAG00000009217	gpatch8	100	83.079	Xiphophorus_maculatus